Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08975

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
793,661	-		MMP_RS04175	0.25	+0.7
793,662	+		MMP_RS04175	0.25	-0.4
793,670	+		MMP_RS04175	0.26	+0.6
793,693	-		MMP_RS04175	0.29	+0.2
793,741	-		MMP_RS04175	0.34	+0.4
793,750	+		MMP_RS04175	0.35	-5.3
793,770	+		MMP_RS04175	0.37	+4.4
793,770	+		MMP_RS04175	0.37	-0.2
793,770	+		MMP_RS04175	0.37	+0.5
793,860	-		MMP_RS04175	0.47	-0.2
793,906	-		MMP_RS04175	0.52	+1.3
793,906	-		MMP_RS04175	0.52	+1.6
793,945	+		MMP_RS04175	0.57	-0.5
793,967	+		MMP_RS04175	0.59	+0.2
793,986	+		MMP_RS04175	0.61	+0.9
794,027	-		MMP_RS04175	0.66	+1.4
794,027	-		MMP_RS04175	0.66	-1.6
794,028	+		MMP_RS04175	0.66	+0.4
794,028	+		MMP_RS04175	0.66	+0.5
794,113	+		MMP_RS04175	0.75	-0.4
794,114	-		MMP_RS04175	0.75	+0.7
794,131	-		MMP_RS04175	0.77	-3.9
794,146	-		MMP_RS04175	0.79	-1.3
794,147	+		MMP_RS04175	0.79	-0.0
794,274	+				+2.1
794,285	+				-2.2
794,291	+				-0.0
794,291	+				+0.8
794,293	+				+0.9
794,333	-				+0.1
794,333	-				+0.8
794,334	+				+0.7
794,368	-				+2.9
794,373	+				+0.4
794,395	+				-0.8
794,399	+				-0.8
794,409	-				+1.3
794,450	-				+0.4
794,451	+				+0.6
794,459	-				-0.9
794,460	+				+1.5
794,460	+				+0.4
794,460	+				+1.1
794,460	+				+1.3
794,460	+				-0.5
794,460	+				-1.7
794,461	-				+0.0
794,461	-				+1.5
794,461	-				+0.0
794,462	+				+0.2
794,462	+				-1.3
794,462	+				+0.3
794,462	+				-0.3
794,463	-				-0.2
794,463	-				+0.2
794,463	-				-0.1
794,463	-				+2.1
794,463	-				-0.7
794,463	-				-0.2
794,464	+				-2.4
794,464	+				+0.3
794,464	+				+0.1
794,465	-				+0.5
794,465	-				-0.3
794,469	+				+0.1
794,518	+				+1.2
794,590	-				+0.6
794,597	-				-1.1
794,597	-				+0.5
794,597	-				-0.2
794,597	-				+0.6
794,598	+				+1.9
794,598	+				+0.4
794,606	-				+0.3
794,644	+		MMP_RS08975	0.32	+3.2
794,668	+		MMP_RS08975	0.47	-1.1
794,690	+		MMP_RS08975	0.62	+1.7
794,690	+		MMP_RS08975	0.62	+1.1
794,819	-				-1.0
794,840	-				-1.4
794,841	+				+0.0
794,844	-				+0.7
794,849	-				-0.1
794,850	+				+0.4
794,850	+				-0.1
794,850	+				-2.3
794,850	+				-0.3
794,851	-				+1.5
794,851	-				-0.4
794,852	+				+0.2
794,853	-				+0.3
794,853	-				+1.3
794,853	-				-0.4
794,853	-				-1.0
794,853	-				+1.2
794,853	-				+1.0
794,854	+				+0.4
794,854	+				+1.6
794,854	+				-0.5
794,854	+				-0.7
794,854	+				+0.2
794,854	+				+0.5
794,854	+				+1.4
794,854	+				+0.2
794,854	+				+1.9
794,854	+				-0.4
794,856	+				-2.5
794,908	-				+2.1
794,908	-				-0.2
794,911	-				+0.6
794,945	-				-0.5
794,961	-				-0.1
794,961	-				-0.1
795,122	+		MMP_RS04180	0.15	-0.9
795,133	-		MMP_RS04180	0.16	+0.8
795,134	+		MMP_RS04180	0.16	-1.7
795,371	-		MMP_RS04180	0.36	+1.2
795,372	+		MMP_RS04180	0.36	+0.1
795,565	+		MMP_RS04180	0.53	+1.7
795,565	+		MMP_RS04180	0.53	+1.4
795,568	-		MMP_RS04180	0.53	-0.2
795,600	-		MMP_RS04180	0.56	+0.7
795,600	-		MMP_RS04180	0.56	+0.0
795,600	-		MMP_RS04180	0.56	-0.6
795,601	+		MMP_RS04180	0.56	+0.2
795,601	+		MMP_RS04180	0.56	-0.3