Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08225

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,547,033	+		MMP_RS08215	0.55	+1.9
1,547,033	+		MMP_RS08215	0.55	-0.5
1,547,064	+		MMP_RS08215	0.61	+0.4
1,547,374	-				-2.4
1,547,500	-				-3.4
1,547,501	+				+0.3
1,547,996	+				+1.2
1,548,000	-				+0.4
1,548,009	+				-1.3
1,548,017	+				-0.8
1,548,062	-				+1.0
1,548,088	+		MMP_RS08225	0.12	+3.1
1,548,310	-		MMP_RS08225	0.39	+1.2
1,548,311	+		MMP_RS08225	0.39	-0.4
1,548,311	+		MMP_RS08225	0.39	-1.6
1,548,418	-		MMP_RS08225	0.53	+0.1
1,548,418	-		MMP_RS08225	0.53	-0.2
1,548,418	-		MMP_RS08225	0.53	-1.5
1,548,418	-		MMP_RS08225	0.53	-0.4
1,548,419	+		MMP_RS08225	0.53	+0.5
1,548,419	+		MMP_RS08225	0.53	+0.9
1,548,419	+		MMP_RS08225	0.53	-1.1
1,548,419	+		MMP_RS08225	0.53	-2.8
1,548,420	-		MMP_RS08225	0.53	+0.3
1,548,420	-		MMP_RS08225	0.53	+0.3
1,548,430	+		MMP_RS08225	0.54	+3.9
1,548,532	+		MMP_RS08225	0.67	-0.0
1,549,088	-		MMP_RS08230	0.33	+0.7
1,549,144	-		MMP_RS08230	0.40	-0.2
1,549,145	+		MMP_RS08230	0.40	-0.0
1,549,287	-		MMP_RS08230	0.59	-0.8
1,549,303	+		MMP_RS08230	0.61	-1.1
1,549,333	-		MMP_RS08230	0.64	-1.2
1,549,351	+		MMP_RS08230	0.67	-2.1
1,549,369	-		MMP_RS08230	0.69	+2.2
1,549,370	+		MMP_RS08230	0.69	-0.6
1,549,398	+		MMP_RS08230	0.73	-0.5
1,549,538	-				+0.2
1,549,563	-				-0.0
1,549,576	-				+1.2
1,549,576	-				+0.2
1,549,577	+				+0.6
1,549,577	+				+0.0
1,549,656	+				-1.5
1,549,657	-				+0.4
1,549,657	-				-0.4
1,549,658	+				+1.8
1,549,658	+				+0.4
1,549,658	+				+0.1
1,549,658	+				-0.4
1,549,658	+				+1.7
1,549,714	-				-0.1
1,549,750	+		MMP_RS08235	0.14	+1.1