Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07875

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,491,025	-				-1.1
1,491,026	+				-1.4
1,491,035	-				-1.9
1,491,351	+				+1.0
1,491,670	+				-1.5
1,491,674	-				-0.5
1,491,708	-				+0.4
1,491,720	-				+3.2
1,491,752	-				-0.0
1,491,770	-				+3.7
1,491,774	+				+0.7
1,491,823	-				+0.3
1,491,848	-				+1.7
1,491,848	-				+1.0
1,491,848	-				-1.3
1,491,849	+				+0.6
1,491,850	-				+0.3
1,491,895	+				-1.3
1,491,909	-				-0.9
1,491,933	+				-2.7
1,491,933	+				-2.2
1,492,001	-				-0.8
1,492,027	-		MMP_RS07875	0.13	-4.1
1,492,041	-		MMP_RS07875	0.17	-2.8
1,492,048	-		MMP_RS07875	0.18	-1.3
1,492,049	+		MMP_RS07875	0.18	-2.3
1,492,049	+		MMP_RS07875	0.18	-1.2
1,492,052	+		MMP_RS07875	0.19	-0.5
1,492,072	+		MMP_RS07875	0.23	+2.5
1,492,112	-		MMP_RS07875	0.32	-5.3
1,492,206	+		MMP_RS07875	0.53	-0.7
1,492,296	-		MMP_RS07875	0.73	-0.4
1,492,380	-				-2.6
1,492,381	+				-2.4
1,492,381	+				-0.3
1,492,431	-				-2.3
1,492,434	-				+1.4
1,492,434	-				-0.4
1,492,434	-				-0.5
1,492,468	-				-0.3
1,492,474	+				+0.2
1,492,474	+				+1.3
1,492,527	-		MMP_RS07880	0.18	+0.5
1,492,623	+		MMP_RS07880	0.36	-2.6
1,492,624	-		MMP_RS07880	0.36	+3.2
1,492,624	-		MMP_RS07880	0.36	+1.1
1,492,626	-		MMP_RS07880	0.36	+0.4
1,492,650	-		MMP_RS07880	0.41	+0.8
1,492,692	+		MMP_RS07880	0.49	-1.3
1,492,702	+		MMP_RS07880	0.50	+1.0
1,492,880	+		MMP_RS07880	0.83	+2.0
1,492,882	+		MMP_RS07880	0.83	-0.8
1,492,936	+				+0.6
1,493,014	+				+0.1
1,493,086	+				+3.2
1,493,290	-		MMP_RS07885	0.26	+1.1