Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07710

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,459,370	+		MMP_RS07700	0.47	-0.9
1,459,449	+		MMP_RS07700	0.57	-0.3
1,459,452	+		MMP_RS07700	0.57	-2.0
1,459,511	-		MMP_RS07700	0.65	-2.6
1,459,555	-		MMP_RS07700	0.70	-0.7
1,459,556	+		MMP_RS07700	0.70	-0.3
1,459,556	+		MMP_RS07700	0.70	-1.7
1,459,589	+		MMP_RS07700	0.75	-0.5
1,459,699	-		MMP_RS07700	0.89	-1.4
1,459,722	-				-0.2
1,459,722	-				-0.1
1,459,763	+				-1.1
1,459,763	+				-0.5
1,459,841	+				-2.3
1,459,861	-		MMP_RS07705	0.11	+0.0
1,459,907	-		MMP_RS07705	0.20	-0.3
1,459,908	+		MMP_RS07705	0.20	+1.3
1,459,954	+		MMP_RS07705	0.29	-1.5
1,459,956	+		MMP_RS07705	0.29	-2.7
1,459,984	-		MMP_RS07705	0.35	+1.3
1,459,985	+		MMP_RS07705	0.35	-0.2
1,460,055	+		MMP_RS07705	0.49	-0.9
1,460,122	-		MMP_RS07705	0.62	+1.1
1,460,182	+		MMP_RS07705	0.73	-1.6
1,460,188	-		MMP_RS07705	0.75	+0.9
1,460,188	-		MMP_RS07705	0.75	-0.5
1,460,189	+		MMP_RS07705	0.75	+0.8
1,460,192	+		MMP_RS07705	0.75	-0.3
1,460,192	+		MMP_RS07705	0.75	-0.9
1,460,208	+		MMP_RS07705	0.79	-0.7
1,460,208	+		MMP_RS07705	0.79	-1.0
1,460,294	-				+0.1
1,460,294	-				+0.8
1,460,294	-				-0.1
1,460,317	-				+0.1
1,460,328	-				-0.1
1,460,359	+				+1.2
1,460,369	-				-3.5
1,460,374	-				-1.9
1,460,377	+				-1.8
1,460,467	-				-0.6
1,460,490	+		MMP_RS07710	0.11	-0.9
1,460,536	-		MMP_RS07710	0.15	-3.0
1,460,550	+		MMP_RS07710	0.17	-3.8
1,460,566	-		MMP_RS07710	0.18	-3.6
1,460,587	-		MMP_RS07710	0.20	+0.1
1,460,664	+		MMP_RS07710	0.27	-0.6
1,460,679	+		MMP_RS07710	0.29	-1.3
1,460,683	-		MMP_RS07710	0.29	-2.5
1,460,694	+		MMP_RS07710	0.30	-1.2
1,460,717	+		MMP_RS07710	0.32	-1.4
1,460,891	-		MMP_RS07710	0.48	-2.0
1,460,930	-		MMP_RS07710	0.51	-1.6
1,461,257	-		MMP_RS07710	0.81	-1.4
1,461,257	-		MMP_RS07710	0.81	-2.8
1,461,340	-		MMP_RS07710	0.89	-1.8
1,461,419	-				-4.3
1,461,430	-				-4.5
1,461,453	+				-0.4
1,461,463	-				-2.4
1,461,497	+				-4.0
1,461,508	+				-1.4
1,461,511	+				-0.5
1,461,511	+				-1.3
1,461,513	-				-0.8
1,461,513	-				+2.2
1,461,519	+				-4.6
1,461,546	-				-2.2
1,461,546	-				-1.7
1,461,568	+				-3.6
1,461,604	-				-0.0
1,461,605	+				-0.9
1,461,609	-				-0.6
1,461,610	+				+0.6
1,461,610	+				-1.7
1,461,637	-				+0.6
1,461,681	+				-3.7
1,461,997	-				-0.7
1,462,026	+				+1.0
1,462,061	+				+1.1
1,462,125	-		MMP_RS07715	0.19	+1.5
1,462,126	+		MMP_RS07715	0.19	-0.0
1,462,216	-		MMP_RS07715	0.38	+0.9
1,462,243	+		MMP_RS07715	0.43	+1.2
1,462,309	+		MMP_RS07715	0.57	-3.3
1,462,309	+		MMP_RS07715	0.57	+1.3
1,462,319	-		MMP_RS07715	0.59	-0.2
1,462,319	-		MMP_RS07715	0.59	-0.8
1,462,320	+		MMP_RS07715	0.59	+2.2
1,462,320	+		MMP_RS07715	0.59	+1.0
1,462,363	-		MMP_RS07715	0.67	+0.2
1,462,363	-		MMP_RS07715	0.67	+0.9
1,462,364	+		MMP_RS07715	0.68	+2.1
1,462,419	-		MMP_RS07715	0.79	-0.2
1,462,420	+		MMP_RS07715	0.79	-0.2