Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07405

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,409,485	+		MMP_RS09050	0.13	+0.6
1,409,508	-		MMP_RS09050	0.25	+1.3
1,409,532	-		MMP_RS09050	0.38	-0.2
1,409,703	-				-0.1
1,409,777	-				+1.9
1,409,868	+				+0.5
1,409,895	-				+0.5
1,409,895	-				+1.2
1,409,896	+				-1.7
1,409,896	+				-0.8
1,409,896	+				-0.1
1,409,907	-				-1.7
1,409,907	-				-1.7
1,409,908	+				-0.3
1,409,908	+				-2.3
1,409,908	+				-0.4
1,409,911	+				+1.2
1,409,949	+				+1.6
1,409,949	+				+0.3
1,410,024	+		MMP_RS09055	0.27	-2.7
1,410,298	-				-2.5
1,410,299	+				-0.0
1,410,299	+				-2.4
1,410,302	+				+1.0
1,410,343	+				+0.3
1,410,379	+				+1.9
1,410,479	+				-1.5
1,410,479	+				-1.5
1,410,501	-				-3.2
1,410,502	+				-1.2
1,410,788	+				-5.1
1,410,793	+				-5.2
1,411,131	-				-4.3
1,411,131	-				-0.2
1,411,131	-				-0.9
1,411,646	+				-4.0
1,411,646	+				-3.1
1,411,698	+				+0.8
1,411,698	+				+1.7
1,411,702	-				+0.5
1,411,716	-				+1.1
1,411,743	+				-1.2
1,411,748	-				-0.6
1,411,749	+				-0.2
1,411,846	+		MMP_RS07410	0.15	-4.5
1,412,140	+		MMP_RS07410	0.47	-0.1
1,412,167	+		MMP_RS07410	0.49	-0.2
1,412,205	-		MMP_RS07410	0.54	-1.7
1,412,205	-		MMP_RS07410	0.54	-2.7
1,412,206	+		MMP_RS07410	0.54	-1.4
1,412,216	-		MMP_RS07410	0.55	-2.1
1,412,216	-		MMP_RS07410	0.55	-1.7
1,412,216	-		MMP_RS07410	0.55	-2.2
1,412,217	+		MMP_RS07410	0.55	-2.9
1,412,218	-		MMP_RS07410	0.55	-1.9
1,412,219	+		MMP_RS07410	0.55	-3.1
1,412,224	-		MMP_RS07410	0.56	-0.1
1,412,224	-		MMP_RS07410	0.56	-0.2
1,412,225	+		MMP_RS07410	0.56	-0.2
1,412,231	-		MMP_RS07410	0.56	-1.7
1,412,231	-		MMP_RS07410	0.56	-2.6
1,412,320	-		MMP_RS07410	0.66	-0.1
1,412,329	+		MMP_RS07410	0.67	-1.0
1,412,331	+		MMP_RS07410	0.67	+0.1
1,412,352	-		MMP_RS07410	0.69	-0.7
1,412,354	-		MMP_RS07410	0.69	+0.5
1,412,355	+		MMP_RS07410	0.69	-4.1
1,412,445	+		MMP_RS07410	0.79	+5.5
1,412,522	-		MMP_RS07410	0.87	-1.1
1,412,619	+				-0.1
1,412,654	-				+0.3
1,412,654	-				+0.9
1,412,657	+				+0.5
1,412,672	+				-3.7
1,412,675	-				+1.5
1,412,679	+				+0.8
1,412,682	-				-0.7
1,412,691	-				+0.3
1,412,696	-				+0.1
1,412,696	-				+1.5