Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07145

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,366,120	+				+1.7
1,366,151	+		MMP_RS07140	0.12	+0.1
1,366,153	+		MMP_RS07140	0.12	-0.9
1,366,157	-		MMP_RS07140	0.12	-0.9
1,366,162	+		MMP_RS07140	0.13	+1.6
1,366,166	-		MMP_RS07140	0.13	+0.7
1,366,166	-		MMP_RS07140	0.13	-0.6
1,366,206	+		MMP_RS07140	0.17	-2.7
1,366,220	+		MMP_RS07140	0.19	+1.6
1,366,309	+		MMP_RS07140	0.27	+0.8
1,366,467	+		MMP_RS07140	0.43	-1.4
1,366,571	-		MMP_RS07140	0.53	+0.8
1,366,572	+		MMP_RS07140	0.53	+1.5
1,366,577	-		MMP_RS07140	0.54	-0.1
1,366,584	+		MMP_RS07140	0.55	+0.6
1,366,611	+		MMP_RS07140	0.57	+0.9
1,366,616	-		MMP_RS07140	0.58	+0.4
1,366,616	-		MMP_RS07140	0.58	-0.1
1,366,616	-		MMP_RS07140	0.58	+1.7
1,366,617	+		MMP_RS07140	0.58	+1.2
1,366,617	+		MMP_RS07140	0.58	+0.0
1,366,617	+		MMP_RS07140	0.58	+1.8
1,366,617	+		MMP_RS07140	0.58	-1.3
1,366,638	+		MMP_RS07140	0.60	+0.3
1,366,638	+		MMP_RS07140	0.60	-0.3
1,366,656	+		MMP_RS07140	0.62	+2.4
1,366,716	+		MMP_RS07140	0.68	-0.9
1,366,749	-		MMP_RS07140	0.71	-1.0
1,366,813	-		MMP_RS07140	0.77	+1.7
1,366,813	-		MMP_RS07140	0.77	-1.5
1,366,814	+		MMP_RS07140	0.77	-1.5
1,366,814	+		MMP_RS07140	0.77	-0.5
1,366,818	+		MMP_RS07140	0.78	+0.4
1,366,841	-		MMP_RS07140	0.80	+0.4
1,366,841	-		MMP_RS07140	0.80	+0.4
1,366,846	+		MMP_RS07140	0.81	+0.4
1,366,854	-		MMP_RS07140	0.81	-0.9
1,366,855	+		MMP_RS07140	0.82	+0.7
1,366,856	-		MMP_RS07140	0.82	+1.7
1,366,913	+		MMP_RS07140	0.87	-0.0
1,366,914	-		MMP_RS07140	0.87	+0.5
1,366,915	+		MMP_RS07140	0.88	-0.3
1,366,964	-				-0.3
1,366,985	-				+0.9
1,366,998	-				+1.0
1,367,009	-				+1.3
1,367,034	+				+0.7
1,367,055	+				+0.7
1,367,069	+				+0.9
1,367,087	+				-1.5
1,367,253	+		MMP_RS07145	0.19	+0.6
1,367,254	-		MMP_RS07145	0.20	+0.2
1,367,255	+		MMP_RS07145	0.20	-1.0
1,367,259	+		MMP_RS07145	0.20	-0.0
1,367,328	-		MMP_RS07145	0.28	-0.5
1,367,435	+		MMP_RS07145	0.41	+0.2
1,367,538	-		MMP_RS07145	0.53	+1.1
1,367,572	-		MMP_RS07145	0.57	+1.3
1,367,572	-		MMP_RS07145	0.57	-1.7
1,367,573	+		MMP_RS07145	0.57	+1.9
1,367,600	+		MMP_RS07145	0.60	+3.7
1,367,612	-		MMP_RS07145	0.61	+0.6
1,367,775	-		MMP_RS07145	0.80	-0.0
1,367,786	+		MMP_RS07145	0.82	+1.3
1,367,788	+		MMP_RS07145	0.82	+0.6
1,367,954	-				+0.7
1,367,967	-				+0.1
1,367,976	+				-1.4
1,368,010	-				-0.1
1,368,056	-		MMP_RS07150	0.28	+0.9
1,368,056	-		MMP_RS07150	0.28	+1.8
1,368,061	-		MMP_RS07150	0.30	+0.3
1,368,061	-		MMP_RS07150	0.30	+2.2
1,368,116	-		MMP_RS07150	0.52	+0.7
1,368,117	+		MMP_RS07150	0.53	-0.1
1,368,219	+				-3.1
1,368,269	-				+0.8
1,368,269	-				+0.1
1,368,270	+				+1.6
1,368,279	+				-0.7
1,368,289	-				+0.5
1,368,368	-				+1.3
1,368,420	-		MMP_RS07155	0.11	+2.1
1,368,422	-		MMP_RS07155	0.12	+1.1
1,368,423	+		MMP_RS07155	0.12	+1.1
1,368,434	-		MMP_RS07155	0.13	+0.8
1,368,473	-		MMP_RS07155	0.16	+2.7
1,368,474	+		MMP_RS07155	0.16	+1.1
1,368,506	-		MMP_RS07155	0.19	+2.2
1,368,551	+		MMP_RS07155	0.23	-0.9
1,368,745	-		MMP_RS07155	0.40	-0.4
1,368,784	+		MMP_RS07155	0.43	+0.4
1,368,923	-		MMP_RS07155	0.55	-2.4