Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06700

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,285,669	+				+0.6
1,285,697	-				+0.1
1,285,698	+				-0.5
1,285,702	+				+0.0
1,285,824	-				+1.2
1,285,863	+				+1.5
1,285,871	+				+0.1
1,285,894	-				-0.9
1,285,952	+				-0.6
1,285,955	-				-0.5
1,285,955	-				+0.0
1,285,976	+				-1.1
1,285,988	-				+0.5
1,286,009	-				+2.4
1,286,010	+				+0.2
1,286,011	-				+0.4
1,286,011	-				+2.5
1,286,011	-				+0.2
1,286,012	+				-1.4
1,286,012	+				+0.9
1,286,015	-				+1.1
1,286,015	-				+0.6
1,286,016	+				+1.3
1,286,016	+				-0.5
1,286,019	-				+1.1
1,286,019	-				-0.9
1,286,019	-				+1.1
1,286,021	-				+1.0
1,286,025	+				+3.6
1,286,029	-				+0.5
1,286,063	+				+0.8
1,286,080	+				+1.4
1,286,090	-				-0.5
1,286,178	+				-0.3
1,286,186	-				+0.8
1,286,603	+				-0.0
1,286,725	-		MMP_RS06700	0.20	-2.8
1,286,726	+		MMP_RS06700	0.20	+1.0
1,286,726	+		MMP_RS06700	0.20	-0.6
1,286,831	-		MMP_RS06700	0.40	-0.4
1,286,831	-		MMP_RS06700	0.40	+1.0
1,286,832	+		MMP_RS06700	0.40	+0.4
1,286,833	-		MMP_RS06700	0.40	+1.1
1,286,836	-		MMP_RS06700	0.40	+1.1
1,286,899	-		MMP_RS06700	0.52	+0.7
1,286,901	-		MMP_RS06700	0.53	+0.7
1,286,902	+		MMP_RS06700	0.53	+1.2
1,286,902	+		MMP_RS06700	0.53	+0.5
1,286,923	-		MMP_RS06700	0.57	+0.7
1,286,923	-		MMP_RS06700	0.57	-1.0
1,286,923	-		MMP_RS06700	0.57	+0.2
1,286,923	-		MMP_RS06700	0.57	+1.3
1,286,923	-		MMP_RS06700	0.57	-0.4
1,286,924	+		MMP_RS06700	0.57	-1.6
1,286,993	+		MMP_RS06700	0.70	-0.1
1,286,998	-		MMP_RS06700	0.71	+1.5
1,287,019	-		MMP_RS06700	0.75	-0.2
1,287,022	-		MMP_RS06700	0.75	-0.6
1,287,023	+		MMP_RS06700	0.75	+0.7
1,287,048	+		MMP_RS06700	0.80	-1.4
1,287,048	+		MMP_RS06700	0.80	-0.9
1,287,146	+				+0.4
1,287,156	-				+0.2
1,287,236	-				-0.1
1,287,425	+		MMP_RS06705	0.28	+0.8
1,287,446	-		MMP_RS06705	0.31	-0.1
1,287,447	+		MMP_RS06705	0.31	-1.9
1,287,529	+		MMP_RS06705	0.41	+0.1
1,287,645	-		MMP_RS06705	0.55	+0.8
1,287,751	-		MMP_RS06705	0.68	-0.7
1,287,829	-		MMP_RS06705	0.77	+0.3
1,287,904	+		MMP_RS06705	0.86	-2.6
1,287,904	+		MMP_RS06705	0.86	+2.2
1,288,019	+				+1.6
1,288,022	+				-0.5
1,288,067	+				+1.1
1,288,070	-				+0.2
1,288,070	-				+1.5
1,288,071	+				+0.9
1,288,071	+				+1.0
1,288,074	-				-1.4
1,288,075	+				+0.5
1,288,075	+				+0.5
1,288,075	+				+0.7
1,288,077	-				-0.0
1,288,078	+				+1.3
1,288,078	+				-0.9
1,288,079	-				+0.6
1,288,080	+				-0.1
1,288,080	+				+1.1
1,288,080	+				+0.6
1,288,081	-				+0.5
1,288,081	-				+2.7
1,288,082	+				+0.2
1,288,082	+				-0.3
1,288,082	+				+0.1
1,288,082	+				+1.3
1,288,084	-				+1.0
1,288,110	-				+1.3
1,288,121	-				+0.4
1,288,129	-				+1.5