Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06005

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,147,107	-		MMP_RS05995	0.55	+0.3
1,147,110	-		MMP_RS05995	0.55	+1.2
1,147,110	-		MMP_RS05995	0.55	+0.8
1,147,110	-		MMP_RS05995	0.55	+1.8
1,147,111	+		MMP_RS05995	0.55	+0.1
1,147,111	+		MMP_RS05995	0.55	+0.2
1,147,226	-		MMP_RS05995	0.65	+0.1
1,147,321	+		MMP_RS05995	0.73	+1.4
1,147,392	-		MMP_RS05995	0.79	+0.1
1,147,421	-		MMP_RS05995	0.82	+0.5
1,147,492	-		MMP_RS05995	0.88	+1.2
1,147,504	-		MMP_RS05995	0.89	+0.8
1,147,510	-		MMP_RS05995	0.90	+1.4
1,147,511	+		MMP_RS05995	0.90	+0.5
1,147,555	+				+0.1
1,147,621	-				+0.7
1,147,621	-				+1.6
1,147,622	+				-0.5
1,147,676	-				+2.2
1,147,712	+		MMP_RS06000	0.18	+0.4
1,147,716	-		MMP_RS06000	0.19	+1.2
1,147,717	+		MMP_RS06000	0.20	+1.1
1,147,717	+		MMP_RS06000	0.20	-2.4
1,147,778	-		MMP_RS06000	0.39	-0.1
1,147,778	-		MMP_RS06000	0.39	+1.1
1,147,779	+		MMP_RS06000	0.39	+0.7
1,147,808	+		MMP_RS06000	0.49	-0.2
1,147,968	+				-1.0
1,147,989	-				-0.0
1,148,019	-				+1.7
1,148,020	+				-0.4
1,148,029	+				-0.9
1,148,029	+				+1.5
1,148,066	-				+1.2
1,148,066	-				+0.3
1,148,066	-				+0.1
1,148,228	+		MMP_RS06005	0.60	+1.3
1,148,287	-		MMP_RS06005	0.87	+1.9
1,148,288	+		MMP_RS06005	0.87	+3.5
1,148,288	+		MMP_RS06005	0.87	+0.9
1,148,636	-		MMP_RS06010	0.14	+1.4
1,148,643	-		MMP_RS06010	0.14	+0.8
1,148,643	-		MMP_RS06010	0.14	+0.0
1,148,643	-		MMP_RS06010	0.14	+1.0
1,148,643	-		MMP_RS06010	0.14	+0.2
1,148,660	-		MMP_RS06010	0.15	+2.0
1,148,661	+		MMP_RS06010	0.15	-1.0
1,148,667	-		MMP_RS06010	0.15	+1.2
1,148,703	-		MMP_RS06010	0.17	+1.2
1,148,703	-		MMP_RS06010	0.17	+1.0
1,148,751	+		MMP_RS06010	0.19	+1.6
1,148,771	-		MMP_RS06010	0.20	-1.3
1,148,799	-		MMP_RS06010	0.22	-0.4
1,148,800	+		MMP_RS06010	0.22	+1.5
1,148,801	-		MMP_RS06010	0.22	-0.6
1,148,902	-		MMP_RS06010	0.26	+2.4
1,149,179	-		MMP_RS06010	0.39	+1.9
1,149,200	+		MMP_RS06010	0.40	+2.8
1,149,229	-		MMP_RS06010	0.41	+1.0
1,149,241	-		MMP_RS06010	0.42	+1.2