Strain Fitness in Methanococcus maripaludis S2 around MMP_RS02465

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
461,606	+		MMP_RS02460	0.75	+1.6
461,643	+		MMP_RS02460	0.76	+1.3
461,755	-		MMP_RS02460	0.80	+1.6
461,756	+		MMP_RS02460	0.80	-0.1
461,756	+		MMP_RS02460	0.80	-1.3
461,829	+		MMP_RS02460	0.82	+0.8
461,844	-		MMP_RS02460	0.83	-3.2
461,857	-		MMP_RS02460	0.83	+0.9
461,913	-		MMP_RS02460	0.85	+1.3
461,922	+		MMP_RS02460	0.85	-0.1
461,947	-		MMP_RS02460	0.86	+1.2
461,948	+		MMP_RS02460	0.86	-0.4
461,948	+		MMP_RS02460	0.86	+0.7
461,949	-		MMP_RS02460	0.86	+1.0
461,949	-		MMP_RS02460	0.86	-1.5
461,949	-		MMP_RS02460	0.86	+0.2
461,949	-		MMP_RS02460	0.86	+1.8
461,949	-		MMP_RS02460	0.86	-1.2
461,950	+		MMP_RS02460	0.86	+0.3
461,950	+		MMP_RS02460	0.86	-0.5
461,950	+		MMP_RS02460	0.86	-0.2
461,970	-		MMP_RS02460	0.87	+1.4
461,972	-		MMP_RS02460	0.87	-4.8
461,972	-		MMP_RS02460	0.87	+0.1
461,973	+		MMP_RS02460	0.87	-0.0
461,973	+		MMP_RS02460	0.87	+0.4
461,973	+		MMP_RS02460	0.87	+0.3
461,975	-		MMP_RS02460	0.87	-1.3
461,975	-		MMP_RS02460	0.87	-0.3
462,047	+		MMP_RS02460	0.90	+1.0
462,054	-		MMP_RS02460	0.90	+1.0
462,054	-		MMP_RS02460	0.90	+0.5
462,054	-		MMP_RS02460	0.90	-0.1
462,054	-		MMP_RS02460	0.90	+1.1
462,055	+		MMP_RS02460	0.90	-1.1
462,059	+		MMP_RS02460	0.90	+1.2
462,123	-				+0.5
462,197	-				+0.7
462,223	-				+0.7
462,226	-				+0.8
462,227	+				+1.0
462,227	+				-1.4
462,295	-				+0.2
462,300	+				+1.6
462,319	+				+1.0
462,321	+				+1.3
462,394	+				+1.8
462,405	-				+0.5
462,430	-				+2.4
462,444	-				+1.6
462,581	+				+0.4
462,581	+				-2.5
462,729	-		MMP_RS02465	0.29	+2.1
462,802	-		MMP_RS02465	0.39	-0.3
462,802	-		MMP_RS02465	0.39	+1.1
462,807	+		MMP_RS02465	0.39	+0.8
462,875	-		MMP_RS02465	0.49	-1.8
462,909	-		MMP_RS02465	0.53	+0.3
462,909	-		MMP_RS02465	0.53	+1.0
462,914	-		MMP_RS02465	0.54	+2.9
462,914	-		MMP_RS02465	0.54	+1.7
462,977	+		MMP_RS02465	0.63	-0.0
463,029	-		MMP_RS02465	0.70	+0.4
463,035	-		MMP_RS02465	0.71	+0.5
463,047	+		MMP_RS02465	0.72	+1.1
463,067	-		MMP_RS02465	0.75	+1.9
463,085	-		MMP_RS02465	0.78	-2.4
463,140	-		MMP_RS02465	0.85	+1.2
463,145	-		MMP_RS02465	0.86	-0.2
463,275	-				-1.4
463,276	+				+1.5
463,276	+				+1.2
463,277	-				+1.1
463,375	+				-1.3
463,380	-				+0.7
463,387	-				-1.8
463,388	+				-2.1
463,404	-				+1.4
463,404	-				+1.1
463,457	-				+1.3
463,457	-				+0.3
463,457	-				-0.6
463,476	-				+0.1
463,481	-				-1.7
463,499	-				+0.3
463,509	-				+0.0
463,510	+				+0.7
463,517	-				+1.9
463,517	-				+2.0
463,527	-				-0.8
463,531	-				+1.2
463,532	+				-0.6
463,532	+				+0.5
463,547	-				+0.5
463,551	-				+0.2
463,551	-				+0.7
463,551	-				-0.0
463,637	+				+1.0
463,676	+		MMP_RS02470	0.18	+0.9
463,819	-		MMP_RS02470	0.57	-4.3
464,000	+				-2.5
464,009	-				-0.3
464,009	-				+0.4
464,009	-				-0.8
464,010	+				-0.6
464,011	-				+0.5
464,012	+				-0.9
464,032	-				-6.6
464,103	+				+2.2
464,103	+				-0.8
464,105	-				-1.2
464,105	-				-0.7
464,105	-				+1.6
464,106	+				+0.2
464,106	+				-1.2
464,198	-		MMP_RS02475	0.27	-1.3
464,199	+		MMP_RS02475	0.28	+0.4
464,236	-		MMP_RS02475	0.42	+0.9