Strain Fitness in Methanococcus maripaludis S2 around MMP_RS02005

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
372,048	-		MMP_RS02000	0.64	+0.2
372,232	+		MMP_RS02000	0.77	-0.5
372,464	+				+1.0
372,468	+				+1.6
372,543	-				+0.4
372,626	+				-0.5
372,626	+				+1.8
372,628	-				+0.9
372,628	-				+0.0
372,628	-				+2.0
372,629	+				-1.0
372,638	-				+1.2
372,675	-				+1.3
372,676	+				+0.8
372,676	+				+1.1
372,679	-				+0.7
372,709	-				+2.2
372,756	+				+1.8
372,892	-				-1.5
372,899	+				+0.7
372,946	-				-1.6
372,947	+				+0.9
372,947	+				+1.4
372,950	-				-0.1
372,950	-				-0.8
372,951	+				+2.6
372,951	+				+0.8
372,954	-				+0.6
372,954	-				+0.7
372,955	+				+0.7
372,959	-				+1.1
372,963	-				+3.5
372,964	+				+0.1
372,964	+				-1.1
372,964	+				+0.5
372,964	+				-0.0
372,964	+				+1.6
372,964	+				-0.9
372,965	-				+0.3
372,965	-				+1.3
372,967	-				+0.1
372,968	+				+1.0
372,968	+				+2.6
372,972	+				+1.4
372,997	+				+0.2
373,046	+				+1.1
373,084	-				-0.7
373,088	-				+0.1
373,088	-				+1.3
373,089	+				+0.9
373,104	-				+0.1
373,129	-		MMP_RS02005	0.10	-0.8
373,155	+		MMP_RS02005	0.12	+1.7
373,421	+		MMP_RS02005	0.35	-0.4
373,421	+		MMP_RS02005	0.35	+1.6
373,426	-		MMP_RS02005	0.35	-0.2
373,427	+		MMP_RS02005	0.35	+2.3
373,517	-		MMP_RS02005	0.43	-1.6
373,535	+		MMP_RS02005	0.44	+0.5
373,574	+		MMP_RS02005	0.48	-0.4
373,574	+		MMP_RS02005	0.48	+1.6
373,575	-		MMP_RS02005	0.48	+1.0
373,692	-		MMP_RS02005	0.58	+1.8
373,865	-		MMP_RS02005	0.72	+1.3
374,061	-		MMP_RS02005	0.89	+0.3
374,141	-				+0.2
374,181	-				+0.7
374,472	-		MMP_RS02010	0.42	-2.8
374,474	-		MMP_RS02010	0.42	+2.9
374,475	+		MMP_RS02010	0.43	-0.8
374,476	-		MMP_RS02010	0.43	-0.4
374,477	+		MMP_RS02010	0.43	-1.2
374,485	-		MMP_RS02010	0.44	-0.0
374,487	-		MMP_RS02010	0.44	+3.9
374,492	+		MMP_RS02010	0.45	-0.8
374,532	-		MMP_RS02010	0.51	-0.8
374,576	-		MMP_RS02010	0.58	-2.0
374,577	+		MMP_RS02010	0.58	-0.6
374,599	-		MMP_RS02010	0.62	-1.9
374,599	-		MMP_RS02010	0.62	-2.0
374,698	-		MMP_RS02010	0.77	+4.5
374,869	-				-0.1
374,875	+				+2.5
374,902	-				-1.1
374,914	-				+0.7
374,918	+				-0.1
374,921	-				+3.2
374,943	-				+0.1
374,963	-				-2.0
374,965	-				+2.0
374,982	+				+0.3
375,019	-		MMP_RS02015	0.11	+1.0
375,038	+		MMP_RS02015	0.13	+0.9
375,074	-		MMP_RS02015	0.16	+0.3
375,077	+		MMP_RS02015	0.16	-0.9