Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01515

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
280,934	-				-1.1
280,991	-				-3.8
280,991	-				-2.1
280,993	-				-3.7
280,994	+				-3.7
281,301	-				-3.1
281,374	-				-0.7
281,375	+				-3.9
281,375	+				-4.4
281,617	+				+2.2
281,742	-		MMP_RS01515	0.12	+0.3
281,742	-		MMP_RS01515	0.12	+1.2
281,767	+		MMP_RS01515	0.14	+3.4
281,767	+		MMP_RS01515	0.14	+0.3
281,770	+		MMP_RS01515	0.14	+1.6
281,781	+		MMP_RS01515	0.14	-1.5
281,924	+		MMP_RS01515	0.22	+2.4
281,974	+		MMP_RS01515	0.25	-4.5
282,159	-		MMP_RS01515	0.34	-2.4
282,186	-		MMP_RS01515	0.36	+0.8
282,546	-		MMP_RS01515	0.55	-0.8
282,548	-		MMP_RS01515	0.55	+2.1
282,549	+		MMP_RS01515	0.55	+1.3
282,711	-		MMP_RS01515	0.64	+1.4
282,820	+		MMP_RS01515	0.69	-0.3
282,855	-		MMP_RS01515	0.71	+1.1
282,856	+		MMP_RS01515	0.71	-1.6
282,859	-		MMP_RS01515	0.71	+3.4
282,859	-		MMP_RS01515	0.71	+1.9
282,859	-		MMP_RS01515	0.71	+1.2
282,860	+		MMP_RS01515	0.71	-0.1
282,863	-		MMP_RS01515	0.72	+2.7
283,111	+		MMP_RS01515	0.85	+1.0
283,317	-				+0.8
283,929	-				+1.0
283,933	-				+0.1
283,933	-				+2.6
283,934	+				+2.0
283,960	+				+1.0
283,995	-				+1.0
283,995	-				-0.6
283,995	-				-0.2
283,996	+				+0.2
284,000	-				-1.6
284,006	+				-1.0
284,062	-				+0.7
284,226	+		MMP_RS01525	0.38	+1.2