Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01115

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
207,365	-		MMP_RS01105	0.67	+1.1
207,383	-		MMP_RS01105	0.69	-0.7
207,390	-		MMP_RS01105	0.70	+1.3
207,390	-		MMP_RS01105	0.70	-0.0
207,652	+				+0.5
207,817	-		MMP_RS01110	0.30	+0.2
208,044	-		MMP_RS01110	0.69	+1.1
208,045	+		MMP_RS01110	0.69	+0.4
208,165	-		MMP_RS01110	0.90	-1.7
208,278	-				+0.8
208,299	-				-1.2
208,648	+		MMP_RS01115	0.35	+0.2
208,648	+		MMP_RS01115	0.35	-0.7
208,929	-		MMP_RS01115	0.60	+1.4
208,973	+		MMP_RS01115	0.64	+1.5
208,988	-		MMP_RS01115	0.65	+1.6
209,078	-		MMP_RS01115	0.73	+1.5
209,079	+		MMP_RS01115	0.73	+1.2
209,079	+		MMP_RS01115	0.73	+2.1
209,111	-		MMP_RS01115	0.76	+0.9
209,293	+				+1.8
209,377	-				+0.5
209,380	-				-0.8
209,384	+				+0.8
209,386	-				+1.0
209,388	-				+0.5
209,388	-				-1.3
209,388	-				+1.0
209,388	-				-1.5
209,389	+				+0.9
209,393	+				-1.1
209,393	+				-1.2
209,393	+				+0.8
209,519	-				-0.2
209,549	-				+1.2
209,549	-				+0.6
209,550	+				+1.4
209,555	-				-0.2
209,560	+				+1.7
209,573	-				+3.0
209,643	-				-0.1
209,644	+				+1.2
209,645	-				+1.7
209,645	-				+0.1
209,646	+				-2.0
209,646	+				+1.6
209,646	+				-0.3
209,656	-				-1.8
209,656	-				+1.0
209,658	-				+0.0
209,659	+				+2.0
209,670	-				+0.6
209,678	-				+0.0
209,678	-				-0.8
209,688	+				+1.9
209,689	-				-0.2
209,689	-				+0.0
209,689	-				-0.5
209,690	+				+1.6
209,691	-				+0.2
209,691	-				+1.6
209,691	-				+0.1
209,692	+				+2.0
209,692	+				+0.0
209,705	+				+1.7
209,746	+				-1.0
209,773	-				-1.6
209,776	-				+1.2
209,791	+				-4.0
209,801	-				+0.8
209,820	+				+1.2
209,840	-				+1.1
209,841	+				+0.7
209,947	-				-1.8
209,947	-				+1.8
209,955	-				-1.4
209,959	-				-0.1
209,959	-				-0.5
209,959	-				+1.4
210,003	+				-0.1
210,010	-				-0.1
210,010	-				+1.4
210,010	-				-1.0
210,010	-				+0.0
210,011	+				+3.4
210,012	-				-0.8
210,012	-				-0.1
210,012	-				+1.3
210,013	+				+0.8
210,013	+				+2.2
210,013	+				+1.0
210,013	+				-0.5
210,013	+				+2.9
210,014	-				+0.8
210,055	-				+0.2
210,055	-				-0.4
210,055	-				-0.6
210,055	-				-2.1
210,057	-				+0.5
210,057	-				-2.2
210,062	-				-0.8
210,062	-				+0.4
210,066	-				+0.6
210,066	-				-0.7
210,066	-				+0.2
210,067	+				+0.1
210,067	+				-1.1
210,123	-				+0.2
210,188	+				-0.3
210,201	-				-0.9
210,202	+				+1.9
210,290	-		MMP_RS01120	0.13	+2.1
210,309	+		MMP_RS01120	0.15	+0.4
210,309	+		MMP_RS01120	0.15	+0.2
210,309	+		MMP_RS01120	0.15	-0.3
210,322	-		MMP_RS01120	0.16	-1.1
210,327	-		MMP_RS01120	0.17	+0.4
210,328	+		MMP_RS01120	0.17	+2.2
210,334	-		MMP_RS01120	0.17	-3.4