Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00640

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
115,615	-		MMP_RS00630	0.89	+0.5
115,616	+		MMP_RS00630	0.89	+0.9
115,616	+		MMP_RS00630	0.89	+0.9
115,618	-		MMP_RS00630	0.89	+2.2
115,618	-		MMP_RS00630	0.89	+0.6
115,619	+		MMP_RS00630	0.89	+0.8
115,676	+				+0.6
115,851	+		MMP_RS00635	0.31	+1.3
115,890	-		MMP_RS00635	0.39	-1.1
115,901	+		MMP_RS00635	0.41	+1.0
115,916	+		MMP_RS00635	0.44	+1.0
116,158	-		MMP_RS00635	0.90	+1.5
116,159	+				+2.9
116,271	+				-2.0
116,329	+				-0.6
116,347	-				+1.2
116,350	-				+3.1
116,435	-				+0.8
116,671	+		MMP_RS00640	0.31	+0.2
116,761	-		MMP_RS00640	0.40	-0.6
116,821	-		MMP_RS00640	0.45	+0.3
116,835	-		MMP_RS00640	0.47	-0.5
116,849	+		MMP_RS00640	0.48	+1.5
116,883	-		MMP_RS00640	0.51	-0.9
116,883	-		MMP_RS00640	0.51	-0.7
116,889	+		MMP_RS00640	0.52	-0.6
116,893	-		MMP_RS00640	0.52	+1.5
116,894	+		MMP_RS00640	0.53	+0.4
116,894	+		MMP_RS00640	0.53	+0.8
117,032	+		MMP_RS00640	0.66	+0.8
117,323	-				+0.2
117,353	-				-0.8
117,353	-				+1.0
117,375	+				-1.4
117,394	-				-1.1
117,767	-		MMP_RS00645	0.22	-0.4
117,832	+		MMP_RS00645	0.26	+1.7
117,832	+		MMP_RS00645	0.26	-0.5
117,833	-		MMP_RS00645	0.26	+0.1
118,261	-		MMP_RS00645	0.52	-2.8
118,261	-		MMP_RS00645	0.52	-1.2
118,262	+		MMP_RS00645	0.52	-0.7