Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00540

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
104,947	-		MMP_RS00535	0.20	+0.7
104,947	-		MMP_RS00535	0.20	-2.4
105,791	-				-0.2
106,134	-		MMP_RS00540	0.20	+0.4
106,192	+		MMP_RS00540	0.25	+2.5
106,193	-		MMP_RS00540	0.25	+0.8
106,196	+		MMP_RS00540	0.25	-0.1
106,300	-		MMP_RS00540	0.34	+0.4
106,300	-		MMP_RS00540	0.34	+1.5
106,302	-		MMP_RS00540	0.34	-0.8
106,706	-		MMP_RS00540	0.68	+1.7
106,706	-		MMP_RS00540	0.68	+1.7
106,724	+		MMP_RS00540	0.70	+0.9
106,997	+				+1.4
107,145	-				-0.3
107,148	+				+0.5
107,155	+				+2.2
107,167	+				+2.1
107,178	+				-0.5
107,181	-				+0.5
107,181	-				-1.0
107,181	-				+0.6
107,182	+				-0.2
107,186	-				+2.6
107,218	-				+2.5
107,219	+				+0.5
107,292	-		MMP_RS00545	0.15	-0.1
107,292	-		MMP_RS00545	0.15	+0.3
107,529	+		MMP_RS00545	0.59	+0.3
107,559	+		MMP_RS00545	0.64	+0.4
107,597	+		MMP_RS00545	0.71	+0.6
107,974	-				-0.5
107,975	+				+1.9
107,979	+				+0.3
107,998	-				-0.7
108,033	+				+1.0
108,052	-				+0.3
108,062	-				-2.1
108,063	+				-0.5
108,076	-				+0.4
108,076	-				+0.9
108,080	-				-2.8
108,081	+				+0.8