Strain Fitness in Pantoea sp. MT58 around IAI47_19585

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
145,121	-		IAI47_19580	0.31	-0.2
145,164	-		IAI47_19580	0.34	+2.7
145,220	-		IAI47_19580	0.39	+2.8
145,220	-		IAI47_19580	0.39	+0.7
145,220	-		IAI47_19580	0.39	-1.7
145,228	+		IAI47_19580	0.40	+1.4
145,228	+		IAI47_19580	0.40	-2.3
145,228	+		IAI47_19580	0.40	-1.0
145,228	+		IAI47_19580	0.40	-0.4
145,228	+		IAI47_19580	0.40	-1.8
145,229	-		IAI47_19580	0.40	+2.4
145,229	-		IAI47_19580	0.40	+1.8
145,229	-		IAI47_19580	0.40	+0.8
145,229	-		IAI47_19580	0.40	+0.2
145,229	-		IAI47_19580	0.40	+1.4
145,229	-		IAI47_19580	0.40	+0.9
145,318	+		IAI47_19580	0.47	-1.3
145,318	+		IAI47_19580	0.47	-0.4
145,319	-		IAI47_19580	0.47	-1.2
145,319	-		IAI47_19580	0.47	+0.8
145,319	-		IAI47_19580	0.47	+1.0
145,319	-		IAI47_19580	0.47	+0.1
145,319	-		IAI47_19580	0.47	+0.9
145,320	+		IAI47_19580	0.47	-1.1
145,320	+		IAI47_19580	0.47	-0.3
145,320	+		IAI47_19580	0.47	-0.6
145,320	+		IAI47_19580	0.47	-0.8
145,321	-		IAI47_19580	0.47	+1.2
145,321	-		IAI47_19580	0.47	+0.3
145,321	-		IAI47_19580	0.47	-1.2
145,321	-		IAI47_19580	0.47	+0.7
145,321	-		IAI47_19580	0.47	+1.7
145,321	-		IAI47_19580	0.47	-0.2
145,332	+		IAI47_19580	0.48	+0.2
145,333	-		IAI47_19580	0.48	-0.3
145,333	-		IAI47_19580	0.48	-0.9
145,333	-		IAI47_19580	0.48	+2.0
145,336	+		IAI47_19580	0.48	-1.8
145,336	+		IAI47_19580	0.48	+2.2
145,336	+		IAI47_19580	0.48	-2.1
145,336	+		IAI47_19580	0.48	-0.6
145,336	+		IAI47_19580	0.48	+2.6
145,337	-		IAI47_19580	0.48	+1.3
145,372	+		IAI47_19580	0.51	-1.3
145,372	+		IAI47_19580	0.51	+1.8
145,372	+		IAI47_19580	0.51	-1.3
145,372	+		IAI47_19580	0.51	+0.4
145,372	+		IAI47_19580	0.51	-0.8
145,372	+		IAI47_19580	0.51	+2.2
145,372	+		IAI47_19580	0.51	-0.9
145,373	-		IAI47_19580	0.51	-0.8
145,373	-		IAI47_19580	0.51	-0.0
145,373	-		IAI47_19580	0.51	+1.8
145,373	-		IAI47_19580	0.51	+2.6
145,393	+		IAI47_19580	0.53	-2.3
145,415	+		IAI47_19580	0.55	+2.5
145,415	+		IAI47_19580	0.55	-0.6
145,416	-		IAI47_19580	0.55	+1.7
145,435	+		IAI47_19580	0.56	-0.8
145,436	-		IAI47_19580	0.56	+1.4
145,436	-		IAI47_19580	0.56	-0.0
145,506	+		IAI47_19580	0.62	-0.8
145,506	+		IAI47_19580	0.62	-2.3
145,558	+		IAI47_19580	0.66	+0.5
145,558	+		IAI47_19580	0.66	-0.5
145,559	-		IAI47_19580	0.67	+0.8
145,572	+		IAI47_19580	0.68	+0.7
145,576	+		IAI47_19580	0.68	+0.2
145,576	+		IAI47_19580	0.68	-0.2
145,576	+		IAI47_19580	0.68	+2.0
145,577	-		IAI47_19580	0.68	+1.5
145,592	-		IAI47_19580	0.69	-1.2
145,592	-		IAI47_19580	0.69	+0.2
145,619	-		IAI47_19580	0.71	+0.5
145,665	+		IAI47_19580	0.75	-2.3
145,665	+		IAI47_19580	0.75	+2.6
145,666	-		IAI47_19580	0.75	+0.9
145,666	-		IAI47_19580	0.75	+0.3
145,666	-		IAI47_19580	0.75	-0.6
145,831	+		IAI47_19580	0.89	-2.2
145,832	-		IAI47_19580	0.89	-0.0
145,850	-				+0.1
145,910	-				-2.6
145,910	-				+0.4
145,967	+				-0.9
145,967	+				-2.3
145,968	-				+0.5
145,989	+				-0.8
145,989	+				-0.2
145,989	+				-3.6
145,989	+				-0.8
145,989	+				-0.2
145,989	+				-0.7
145,990	-				-0.3
145,990	-				+0.3
145,990	-				+0.7
145,990	-				+0.2
145,990	-				+1.9
145,990	-				+0.5
145,990	-				+0.8
145,990	-				+0.8
145,990	-				+4.3
145,990	-				-0.4
145,990	-				+1.4
145,990	-				+0.1
145,991	+				+0.7
145,991	+				+1.8
145,991	+				+0.0
145,992	-				+2.9
146,020	+				-1.2
146,021	-				-0.2
146,043	+				-3.5
146,043	+				+0.2
146,044	-				+0.2
146,080	+				+0.8
146,107	+				+1.8
146,107	+				-2.6
146,108	-				+0.7
146,127	-				+1.0
146,149	+				+3.4
146,149	+				+0.3
146,150	-				+0.3
146,150	-				+1.4
146,160	-				+3.2
146,168	+				+1.8
146,168	+				+1.4
146,169	-				+2.4
146,169	-				+1.3
146,222	+				-0.8
146,246	+				+1.7
146,247	-				+1.0
146,261	+				+1.1
146,261	+				+2.1
146,289	+				+0.6
146,289	+				+1.0
146,290	-				+0.1
146,290	-				+1.5
146,290	-				+3.6
146,291	+				+0.4
146,291	+				+2.6
146,292	-				+0.5
146,292	-				+1.0
146,292	-				+5.1
146,292	-				+0.2
146,292	-				-0.5
146,292	-				+2.2
146,294	+				-0.3
146,294	+				+0.8
146,294	+				+1.6
146,295	-				+1.1
146,295	-				+1.2
146,319	-		IAI47_19585	0.11	-0.1
146,357	+		IAI47_19585	0.13	-0.5
146,357	+		IAI47_19585	0.13	+0.7
146,357	+		IAI47_19585	0.13	+3.2
146,357	+		IAI47_19585	0.13	-0.7
146,357	+		IAI47_19585	0.13	-0.8
146,358	-				+0.2
146,358	-		IAI47_19585	0.13	+1.6
146,385	+		IAI47_19585	0.15	+1.3
146,386	-		IAI47_19585	0.15	-1.8
146,395	+		IAI47_19585	0.15	+1.2
146,396	-		IAI47_19585	0.16	+0.8
146,414	+		IAI47_19585	0.17	+0.8
146,414	+		IAI47_19585	0.17	+0.5
146,415	-		IAI47_19585	0.17	+1.9
146,444	+		IAI47_19585	0.18	-0.8
146,454	+		IAI47_19585	0.19	+1.1
146,454	+		IAI47_19585	0.19	+2.8
146,510	-		IAI47_19585	0.22	+0.4
146,516	+		IAI47_19585	0.22	+2.0
146,603	+		IAI47_19585	0.27	+1.7
146,624	+		IAI47_19585	0.28	+0.4
146,624	+		IAI47_19585	0.28	+0.8
146,624	+		IAI47_19585	0.28	+0.4
146,624	+		IAI47_19585	0.28	+1.0
146,624	+		IAI47_19585	0.28	-0.4
146,625	-		IAI47_19585	0.28	+3.0
146,625	-		IAI47_19585	0.28	+1.5
146,627	+		IAI47_19585	0.29	+0.6
146,627	+		IAI47_19585	0.29	+1.0
146,628	-		IAI47_19585	0.29	+0.2
146,628	-		IAI47_19585	0.29	+1.0
146,628	-		IAI47_19585	0.29	+0.8
146,628	-		IAI47_19585	0.29	+1.7
146,628	-		IAI47_19585	0.29	+3.0
146,628	-		IAI47_19585	0.29	+0.4
146,663	+		IAI47_19585	0.31	+3.1
146,693	+		IAI47_19585	0.32	+1.4
146,694	-		IAI47_19585	0.32	+0.4
146,694	-		IAI47_19585	0.32	+1.5
146,730	-		IAI47_19585	0.34	+0.7
146,742	+		IAI47_19585	0.35	+3.7
146,743	-		IAI47_19585	0.35	+1.7
146,762	-		IAI47_19585	0.36	-0.1
146,847	+		IAI47_19585	0.41	+0.7
146,847	+		IAI47_19585	0.41	+0.4
146,847	+		IAI47_19585	0.41	+1.7
146,848	-		IAI47_19585	0.41	+1.5
146,848	-				+0.2
146,900	+		IAI47_19585	0.44	+1.9
146,900	+		IAI47_19585	0.44	+2.4
146,900	+		IAI47_19585	0.44	+0.8
146,901	-		IAI47_19585	0.44	-0.1
146,912	+		IAI47_19585	0.45	+1.6
146,912	+		IAI47_19585	0.45	+1.7
146,912	+		IAI47_19585	0.45	+1.5
146,912	+		IAI47_19585	0.45	+0.2
146,912	+		IAI47_19585	0.45	+1.9
146,912	+		IAI47_19585	0.45	+1.4
146,913	-		IAI47_19585	0.45	-0.6
146,913	-		IAI47_19585	0.45	-1.1
146,913	-		IAI47_19585	0.45	+1.4
146,913	-		IAI47_19585	0.45	+0.2
146,913	-		IAI47_19585	0.45	+0.5
146,913	-		IAI47_19585	0.45	+3.2
146,960	+		IAI47_19585	0.47	+2.2
146,960	+		IAI47_19585	0.47	+1.0
146,960	+		IAI47_19585	0.47	+1.9
146,961	-		IAI47_19585	0.47	+1.0
146,961	-		IAI47_19585	0.47	+2.2
146,982	-		IAI47_19585	0.49	-1.1
147,031	+		IAI47_19585	0.51	+1.4
147,031	+		IAI47_19585	0.51	-0.5
147,032	-		IAI47_19585	0.51	+2.2
147,102	+		IAI47_19585	0.55	+0.2
147,103	-		IAI47_19585	0.55	+1.8
147,103	-		IAI47_19585	0.55	+0.6
147,128	+		IAI47_19585	0.57	+1.3
147,129	-		IAI47_19585	0.57	+1.3
147,129	-		IAI47_19585	0.57	+0.7
147,177	+		IAI47_19585	0.60	+1.7
147,177	+		IAI47_19585	0.60	+1.5
147,178	-		IAI47_19585	0.60	+2.1
147,178	-		IAI47_19585	0.60	+0.6
147,194	+		IAI47_19585	0.61	+1.2
147,194	+		IAI47_19585	0.61	+0.3
147,215	+		IAI47_19585	0.62	+1.3
147,215	+		IAI47_19585	0.62	+1.0
147,216	-		IAI47_19585	0.62	+0.7
147,216	-		IAI47_19585	0.62	+1.2
147,302	+		IAI47_19585	0.67	+2.0
147,381	+		IAI47_19585	0.71	+0.5
147,381	+		IAI47_19585	0.71	-2.3
147,381	+		IAI47_19585	0.71	+2.9
147,381	+		IAI47_19585	0.71	+0.2
147,382	-		IAI47_19585	0.71	+0.9
147,488	+		IAI47_19585	0.77	+1.6
147,489	-		IAI47_19585	0.77	+3.0
147,610	-		IAI47_19585	0.84	+0.8
147,610	-		IAI47_19585	0.84	+0.6
147,620	+		IAI47_19585	0.85	-0.5
147,620	+		IAI47_19585	0.85	+1.5
147,620	+		IAI47_19585	0.85	+1.4
147,620	+		IAI47_19585	0.85	-1.5
147,620	+		IAI47_19585	0.85	+4.3
147,620	+		IAI47_19585	0.85	-0.8
147,620	+		IAI47_19585	0.85	+2.9
147,620	+		IAI47_19585	0.85	+2.0
147,620	+		IAI47_19585	0.85	+1.2
147,620	+		IAI47_19585	0.85	+2.3
147,620	+		IAI47_19585	0.85	+0.7
147,621	-		IAI47_19585	0.85	+0.9
147,621	-		IAI47_19585	0.85	+1.7
147,621	-		IAI47_19585	0.85	+1.6
147,621	-		IAI47_19585	0.85	+0.9
147,621	-		IAI47_19585	0.85	+0.0
147,621	-		IAI47_19585	0.85	-0.5
147,621	-		IAI47_19585	0.85	+4.5
147,621	-		IAI47_19585	0.85	+1.2
147,621	-		IAI47_19585	0.85	+0.5
147,625	-		IAI47_19585	0.85	+0.4
147,625	-		IAI47_19585	0.85	+0.7
147,681	-		IAI47_19585	0.88	+2.1
147,747	+				+2.5
147,748	-				+1.3
147,748	-				+0.7
147,748	-				+0.8
147,748	-				+1.6
147,748	-				+0.9
147,749	+				+1.1
147,749	+				+3.5
147,804	+				+1.0
147,804	+				+3.2
147,828	+				+3.7
147,829	-				-0.1
147,892	-				-0.2
147,895	-				+2.2
147,895	-				-0.3
147,925	+				-0.9
147,926	-				-0.4
147,946	+				+2.6
147,972	-				-1.7
147,972	-				-0.2
147,972	-				+0.2
147,972	-				-1.3
147,972	-				-0.3
147,972	-				-0.5
147,984	-				+2.4
147,984	-				+0.1
147,984	-				+0.0
148,003	+				-1.6
148,003	+				+0.3
148,004	-				+0.6
148,004	-				-0.0
148,004	-				+0.8
148,004	-				+1.1
148,004	-				+3.0
148,091	+		IAI47_19590	0.18	-1.3
148,092	-		IAI47_19590	0.18	+1.1
148,243	+		IAI47_19590	0.34	+1.6
148,244	-		IAI47_19590	0.34	+0.1
148,258	+		IAI47_19590	0.35	+0.2
148,258	+		IAI47_19590	0.35	-1.1
148,258	+		IAI47_19590	0.35	+0.1
148,259	-		IAI47_19590	0.35	+0.4
148,259	-		IAI47_19590	0.35	-0.3
148,259	-		IAI47_19590	0.35	-0.5
148,259	-		IAI47_19590	0.35	+0.6
148,271	+		IAI47_19590	0.37	-0.8
148,347	+		IAI47_19590	0.45	+2.2
148,347	+		IAI47_19590	0.45	-2.3
148,386	-		IAI47_19590	0.49	-0.2
148,386	-		IAI47_19590	0.49	-0.5
148,460	+		IAI47_19590	0.57	+1.0
148,461	-		IAI47_19590	0.57	+1.6
148,461	-		IAI47_19590	0.57	-0.6
148,461	-		IAI47_19590	0.57	+1.0
148,494	+		IAI47_19590	0.61	-1.9
148,495	-		IAI47_19590	0.61	+0.3
148,524	+		IAI47_19590	0.64	-1.3
148,525	-		IAI47_19590	0.64	-1.3
148,525	-		IAI47_19590	0.64	+0.3
148,525	-		IAI47_19590	0.64	+2.3
148,525	-		IAI47_19590	0.64	+1.5
148,618	+		IAI47_19590	0.74	+2.0
148,618	+		IAI47_19590	0.74	+0.0
148,619	-		IAI47_19590	0.74	+0.7
148,619	-		IAI47_19590	0.74	+0.2
148,622	+		IAI47_19590	0.74	-1.4
148,622	+		IAI47_19590	0.74	+0.4
148,622	+		IAI47_19590	0.74	+0.6
148,622	+		IAI47_19590	0.74	+1.2
148,622	+		IAI47_19590	0.74	+0.0
148,622	+		IAI47_19590	0.74	-1.3
148,622	+		IAI47_19590	0.74	+0.4
148,622	+		IAI47_19590	0.74	-0.0
148,622	+		IAI47_19590	0.74	-1.2
148,623	-		IAI47_19590	0.74	-1.3
148,623	-		IAI47_19590	0.74	-0.1
148,623	-		IAI47_19590	0.74	+2.0
148,623	-		IAI47_19590	0.74	+1.4
148,623	-		IAI47_19590	0.74	-1.6
148,623	-		IAI47_19590	0.74	+2.4
148,623	-		IAI47_19590	0.74	+0.2
148,629	+		IAI47_19590	0.75	-0.2
148,629	+		IAI47_19590	0.75	+3.2
148,629	+		IAI47_19590	0.75	+0.0
148,630	-		IAI47_19590	0.75	-0.0
148,630	-		IAI47_19590	0.75	-0.0
148,691	+		IAI47_19590	0.82	+2.1
148,691	+		IAI47_19590	0.82	+1.8
148,692	-		IAI47_19590	0.82	+1.4
148,692	-		IAI47_19590	0.82	+1.0
148,692	-		IAI47_19590	0.82	+1.6
148,692	-		IAI47_19590	0.82	-0.8
148,695	+		IAI47_19590	0.82	+1.2
148,695	+		IAI47_19590	0.82	+0.0
148,695	+		IAI47_19590	0.82	-1.1
148,695	+		IAI47_19590	0.82	-1.3
148,696	-		IAI47_19590	0.82	-0.6
148,696	-		IAI47_19590	0.82	-0.4
148,742	+		IAI47_19590	0.87	-0.5
148,742	+		IAI47_19590	0.87	+1.5
148,743	-		IAI47_19590	0.87	-0.6
148,743	-		IAI47_19590	0.87	-1.2
148,743	-		IAI47_19590	0.87	-0.3
148,743	-		IAI47_19590	0.87	-2.9
148,766	+		IAI47_19590	0.90	+0.1
148,766	+		IAI47_19590	0.90	+1.5
148,767	-		IAI47_19590	0.90	-2.2
148,767	-		IAI47_19590	0.90	+0.2
148,767	-		IAI47_19590	0.90	-0.0
148,767	-		IAI47_19590	0.90	+0.9
148,768	+		IAI47_19590	0.90	+0.6
148,768	+		IAI47_19590	0.90	+3.0
148,768	+		IAI47_19590	0.90	+1.1
148,769	-				+1.0
148,842	+				-0.7
148,842	+				-0.4
148,856	+				+0.4
148,857	-				-1.6
148,857	-				-1.2
148,857	-				+0.7
148,878	-				+1.2