Strain Fitness in Pantoea sp. MT58 around IAI47_17985

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
3,818,137	+		IAI47_17975	0.62	-0.5
3,818,137	+		IAI47_17975	0.62	-3.4
3,818,138	-		IAI47_17975	0.62	-1.1
3,818,138	-		IAI47_17975	0.62	-1.1
3,818,353	+				-1.1
3,818,353	+				+1.5
3,818,354	-				-2.8
3,818,354	-				+0.5
3,818,354	-				-0.9
3,818,354	-				-0.2
3,818,354	-				-2.1
3,818,359	+				-0.9
3,818,359	+				-1.4
3,818,360	-				-0.9
3,818,360	-				-0.8
3,818,395	-				-1.1
3,818,395	-				-1.3
3,818,463	+		IAI47_17980	0.11	-1.8
3,818,463	+		IAI47_17980	0.11	-0.4
3,818,463	+		IAI47_17980	0.11	-2.1
3,818,463	+		IAI47_17980	0.11	+0.5
3,818,463	+		IAI47_17980	0.11	-0.1
3,818,464	-		IAI47_17980	0.11	-1.0
3,818,464	-		IAI47_17980	0.11	-2.3
3,818,568	+		IAI47_17980	0.25	-3.4
3,818,568	+		IAI47_17980	0.25	-1.1
3,818,569	-		IAI47_17980	0.25	-0.3
3,818,609	-		IAI47_17980	0.31	-2.1
3,818,609	-		IAI47_17980	0.31	-0.9
3,818,706	+		IAI47_17980	0.44	-4.0
3,818,706	+		IAI47_17980	0.44	-1.2
3,818,707	-		IAI47_17980	0.44	-2.2
3,818,707	-		IAI47_17980	0.44	-0.3
3,818,707	-		IAI47_17980	0.44	-0.8
3,818,707	-		IAI47_17980	0.44	-1.7
3,818,707	-		IAI47_17980	0.44	-0.2
3,818,756	+		IAI47_17980	0.51	-1.0
3,818,756	+		IAI47_17980	0.51	-0.8
3,818,757	-		IAI47_17980	0.51	-0.4
3,818,791	+		IAI47_17980	0.55	-2.1
3,818,791	+		IAI47_17980	0.55	-0.2
3,818,791	+		IAI47_17980	0.55	-0.4
3,818,791	+		IAI47_17980	0.55	-0.8
3,818,791	+		IAI47_17980	0.55	-2.5
3,818,791	+		IAI47_17980	0.55	-0.4
3,818,791	+		IAI47_17980	0.55	-1.8
3,818,791	+		IAI47_17980	0.55	+2.1
3,818,791	+		IAI47_17980	0.55	-1.9
3,818,792	-		IAI47_17980	0.55	+1.2
3,818,792	-		IAI47_17980	0.55	-2.0
3,818,792	-		IAI47_17980	0.55	-1.1
3,818,792	-		IAI47_17980	0.55	+0.6
3,818,800	+		IAI47_17980	0.56	-0.9
3,818,800	+		IAI47_17980	0.56	-1.3
3,818,801	-		IAI47_17980	0.57	-2.2
3,818,893	+		IAI47_17980	0.69	-0.8
3,818,894	-		IAI47_17980	0.69	-1.8
3,818,894	-		IAI47_17980	0.69	+0.3
3,818,986	+		IAI47_17980	0.81	-0.3
3,818,986	+		IAI47_17980	0.81	-2.7
3,818,987	-		IAI47_17980	0.82	-1.8
3,818,987	-		IAI47_17980	0.82	-1.9
3,819,028	-		IAI47_17980	0.87	-0.2
3,819,028	-		IAI47_17980	0.87	+1.5
3,819,315	+				+2.1
3,819,315	+				-2.4
3,819,316	-				+0.5
3,819,321	+				-0.2
3,819,321	+				-0.9
3,819,321	+				-1.1
3,819,321	+				-1.8
3,819,322	-				-1.1
3,819,325	-				-0.5
3,819,325	-				+0.6
3,819,325	-				-1.7
3,819,325	-				-0.8
3,819,325	-				-2.1
3,819,362	+		IAI47_17985	0.11	+1.6
3,819,362	+		IAI47_17985	0.11	+1.5
3,819,362	+		IAI47_17985	0.11	-2.1
3,819,363	-		IAI47_17985	0.11	+0.3
3,819,372	+		IAI47_17985	0.12	-1.6
3,819,373	-		IAI47_17985	0.12	+1.0
3,819,374	+		IAI47_17985	0.12	-2.1
3,819,374	+		IAI47_17985	0.12	-3.3
3,819,374	+		IAI47_17985	0.12	-1.7
3,819,375	-		IAI47_17985	0.12	-2.5
3,819,375	-		IAI47_17985	0.12	+0.7
3,819,375	-		IAI47_17985	0.12	-1.9
3,819,396	+		IAI47_17985	0.13	-1.5
3,819,396	+		IAI47_17985	0.13	-1.9
3,819,396	+		IAI47_17985	0.13	-1.7
3,819,396	+		IAI47_17985	0.13	+0.8
3,819,397	-		IAI47_17985	0.13	-2.6
3,819,432	+		IAI47_17985	0.15	-1.1
3,819,432	+		IAI47_17985	0.15	-1.0
3,819,432	+		IAI47_17985	0.15	-1.8
3,819,433	-		IAI47_17985	0.15	-0.8
3,819,433	-		IAI47_17985	0.15	+2.1
3,819,440	+		IAI47_17985	0.15	-1.1
3,819,440	+		IAI47_17985	0.15	+1.0
3,819,440	+		IAI47_17985	0.15	-2.4
3,819,441	-		IAI47_17985	0.15	-3.3
3,819,546	+		IAI47_17985	0.20	+1.3
3,819,546	+		IAI47_17985	0.20	-0.4
3,819,584	+		IAI47_17985	0.22	-0.8
3,819,584	+		IAI47_17985	0.22	+0.5
3,819,607	-		IAI47_17985	0.23	-0.2
3,819,648	+		IAI47_17985	0.25	-0.7
3,819,648	+		IAI47_17985	0.25	-0.1
3,819,649	-		IAI47_17985	0.25	+0.0
3,819,660	+		IAI47_17985	0.26	-0.9
3,819,660	+		IAI47_17985	0.26	-0.5
3,819,660	+		IAI47_17985	0.26	-2.2
3,819,660	+		IAI47_17985	0.26	-0.5
3,819,661	-		IAI47_17985	0.26	-1.6
3,819,661	-		IAI47_17985	0.26	-1.1
3,819,661	-		IAI47_17985	0.26	+0.7
3,819,661	-		IAI47_17985	0.26	-1.8
3,819,661	-		IAI47_17985	0.26	+0.1
3,819,661	-		IAI47_17985	0.26	-1.3
3,819,661	-		IAI47_17985	0.26	+0.5
3,819,750	+		IAI47_17985	0.30	+0.1
3,819,751	-		IAI47_17985	0.30	-1.5
3,819,751	-		IAI47_17985	0.30	-2.8
3,819,779	+		IAI47_17985	0.31	+0.5
3,819,789	+		IAI47_17985	0.32	+0.4
3,819,789	+		IAI47_17985	0.32	-1.7
3,819,789	+		IAI47_17985	0.32	+0.2
3,819,789	+		IAI47_17985	0.32	-3.7
3,819,789	+		IAI47_17985	0.32	-1.9
3,819,789	+		IAI47_17985	0.32	+0.7
3,819,790	-		IAI47_17985	0.32	-1.3
3,819,790	-		IAI47_17985	0.32	-0.8
3,819,790	-		IAI47_17985	0.32	-2.5
3,819,790	-		IAI47_17985	0.32	-1.5
3,819,790	-		IAI47_17985	0.32	+1.8
3,819,790	-		IAI47_17985	0.32	-1.1
3,819,804	+		IAI47_17985	0.33	-0.5
3,819,864	+		IAI47_17985	0.35	-0.2
3,819,864	+		IAI47_17985	0.35	-3.7
3,819,864	+		IAI47_17985	0.35	-2.2
3,819,864	+		IAI47_17985	0.35	+0.1
3,819,864	+		IAI47_17985	0.35	+0.8
3,819,864	+		IAI47_17985	0.35	+0.5
3,819,864	+		IAI47_17985	0.35	-0.6
3,819,865	-		IAI47_17985	0.35	-2.9
3,819,865	-		IAI47_17985	0.35	-1.6
3,819,865	-		IAI47_17985	0.35	-2.7
3,819,865	-		IAI47_17985	0.35	-0.1
3,819,865	-		IAI47_17985	0.35	-1.2
3,819,865	-		IAI47_17985	0.35	+0.5
3,819,901	-		IAI47_17985	0.37	+1.5
3,819,914	+		IAI47_17985	0.38	-1.8
3,819,915	-		IAI47_17985	0.38	-0.1
3,819,915	-		IAI47_17985	0.38	-2.4
3,819,920	+		IAI47_17985	0.38	-0.7
3,819,920	+		IAI47_17985	0.38	+1.1
3,819,920	+		IAI47_17985	0.38	-2.9
3,819,921	-		IAI47_17985	0.38	-3.4
3,819,921	-		IAI47_17985	0.38	-2.2
3,819,921	-		IAI47_17985	0.38	-1.8
3,819,921	-		IAI47_17985	0.38	-0.5
3,819,942	-		IAI47_17985	0.39	-2.2
3,819,994	-		IAI47_17985	0.42	-0.2
3,819,994	-		IAI47_17985	0.42	-2.0
3,819,994	-		IAI47_17985	0.42	+0.5
3,819,995	+		IAI47_17985	0.42	-1.8
3,819,995	+		IAI47_17985	0.42	-1.2
3,819,996	-		IAI47_17985	0.42	-0.3
3,820,033	+		IAI47_17985	0.44	-2.8
3,820,033	+		IAI47_17985	0.44	-1.7
3,820,062	+		IAI47_17985	0.45	-0.3
3,820,062	+		IAI47_17985	0.45	-2.1
3,820,063	-		IAI47_17985	0.45	-1.3
3,820,113	+		IAI47_17985	0.47	-2.8
3,820,113	+		IAI47_17985	0.47	-1.7
3,820,113	+		IAI47_17985	0.47	-1.5
3,820,113	+		IAI47_17985	0.47	-1.0
3,820,113	+		IAI47_17985	0.47	-2.1
3,820,113	+		IAI47_17985	0.47	-2.9
3,820,114	-		IAI47_17985	0.47	-1.1
3,820,114	-		IAI47_17985	0.47	-2.0
3,820,114	-		IAI47_17985	0.47	-0.6
3,820,114	-		IAI47_17985	0.47	+0.8
3,820,114	-		IAI47_17985	0.47	-2.1
3,820,114	-		IAI47_17985	0.47	-0.1
3,820,114	-		IAI47_17985	0.47	-1.3
3,820,114	-		IAI47_17985	0.47	-1.3
3,820,114	-		IAI47_17985	0.47	-1.2
3,820,114	-		IAI47_17985	0.47	-2.1
3,820,138	-		IAI47_17985	0.49	-0.4
3,820,145	+		IAI47_17985	0.49	-0.5
3,820,180	+		IAI47_17985	0.51	-0.3
3,820,180	+		IAI47_17985	0.51	-0.9
3,820,180	+		IAI47_17985	0.51	-2.3
3,820,180	+		IAI47_17985	0.51	-1.6
3,820,180	+		IAI47_17985	0.51	-1.3
3,820,180	+		IAI47_17985	0.51	-1.7
3,820,180	+		IAI47_17985	0.51	-2.0
3,820,181	-		IAI47_17985	0.51	-0.1
3,820,181	-		IAI47_17985	0.51	+0.5
3,820,181	-		IAI47_17985	0.51	-1.7
3,820,181	-		IAI47_17985	0.51	-0.4
3,820,181	-		IAI47_17985	0.51	+2.1
3,820,181	-		IAI47_17985	0.51	-3.1
3,820,181	-		IAI47_17985	0.51	-1.4
3,820,181	-		IAI47_17985	0.51	-0.2
3,820,181	-		IAI47_17985	0.51	-1.6
3,820,203	-		IAI47_17985	0.52	-3.5
3,820,235	+		IAI47_17985	0.53	+1.1
3,820,235	+		IAI47_17985	0.53	-1.6
3,820,235	+		IAI47_17985	0.53	+0.5
3,820,236	-		IAI47_17985	0.53	-1.5
3,820,358	+		IAI47_17985	0.59	-2.3
3,820,358	+		IAI47_17985	0.59	-0.5
3,820,370	+		IAI47_17985	0.60	-1.3
3,820,370	+		IAI47_17985	0.60	-1.2
3,820,370	+		IAI47_17985	0.60	-3.3
3,820,371	-		IAI47_17985	0.60	-1.3
3,820,376	+		IAI47_17985	0.60	-0.6
3,820,376	+		IAI47_17985	0.60	-3.1
3,820,398	+		IAI47_17985	0.61	-1.4
3,820,398	+		IAI47_17985	0.61	-1.1
3,820,399	-		IAI47_17985	0.61	-1.7
3,820,399	-		IAI47_17985	0.61	-2.1
3,820,399	-		IAI47_17985	0.61	-0.3
3,820,449	+		IAI47_17985	0.63	-1.1
3,820,449	+		IAI47_17985	0.63	-1.7
3,820,449	+		IAI47_17985	0.63	+0.5
3,820,449	+		IAI47_17985	0.63	-0.5
3,820,449	+		IAI47_17985	0.63	-2.7
3,820,449	+		IAI47_17985	0.63	-0.6
3,820,449	+		IAI47_17985	0.63	-1.0
3,820,449	+		IAI47_17985	0.63	-0.1
3,820,449	+		IAI47_17985	0.63	-3.1
3,820,449	+		IAI47_17985	0.63	-0.5
3,820,449	+		IAI47_17985	0.63	-0.1
3,820,449	+		IAI47_17985	0.63	+2.1
3,820,449	+		IAI47_17985	0.63	-1.0
3,820,449	+		IAI47_17985	0.63	-1.2
3,820,449	+		IAI47_17985	0.63	+0.9
3,820,449	+		IAI47_17985	0.63	-1.1
3,820,449	+		IAI47_17985	0.63	-1.3
3,820,449	+		IAI47_17985	0.63	-0.8
3,820,450	-		IAI47_17985	0.63	+0.5
3,820,450	-		IAI47_17985	0.63	-0.0
3,820,450	-		IAI47_17985	0.63	-0.2
3,820,450	-		IAI47_17985	0.63	+0.4
3,820,450	-		IAI47_17985	0.63	-0.4
3,820,450	-		IAI47_17985	0.63	-3.7
3,820,450	-		IAI47_17985	0.63	-2.9
3,820,450	-		IAI47_17985	0.63	-0.7
3,820,450	-		IAI47_17985	0.63	-1.3
3,820,450	-		IAI47_17985	0.63	-1.1
3,820,450	-		IAI47_17985	0.63	-0.6
3,820,450	-		IAI47_17985	0.63	-0.2
3,820,450	-		IAI47_17985	0.63	-0.1
3,820,450	-		IAI47_17985	0.63	+0.8
3,820,450	-		IAI47_17985	0.63	+1.3
3,820,451	+		IAI47_17985	0.64	-0.4
3,820,451	+		IAI47_17985	0.64	-1.3
3,820,451	+		IAI47_17985	0.64	-0.5
3,820,451	+		IAI47_17985	0.64	+0.2
3,820,451	+		IAI47_17985	0.64	-1.7
3,820,451	+		IAI47_17985	0.64	-1.4
3,820,451	+		IAI47_17985	0.64	+0.2
3,820,451	+		IAI47_17985	0.64	+0.5
3,820,451	+		IAI47_17985	0.64	-2.5
3,820,451	+		IAI47_17985	0.64	+0.9
3,820,451	+		IAI47_17985	0.64	-1.3
3,820,451	+		IAI47_17985	0.64	-1.2
3,820,451	+		IAI47_17985	0.64	+0.7
3,820,451	+		IAI47_17985	0.64	-2.4
3,820,451	+		IAI47_17985	0.64	-2.3
3,820,451	+		IAI47_17985	0.64	-2.0
3,820,451	+		IAI47_17985	0.64	-0.8
3,820,451	+		IAI47_17985	0.64	-2.3
3,820,451	+		IAI47_17985	0.64	+0.5
3,820,451	+		IAI47_17985	0.64	-0.4
3,820,451	+		IAI47_17985	0.64	-2.9
3,820,451	+		IAI47_17985	0.64	-0.1
3,820,451	+		IAI47_17985	0.64	-1.7
3,820,451	+		IAI47_17985	0.64	-3.2
3,820,451	+		IAI47_17985	0.64	+0.5
3,820,451	+		IAI47_17985	0.64	-1.3
3,820,452	-		IAI47_17985	0.64	-1.2
3,820,452	-		IAI47_17985	0.64	-0.3
3,820,452	-		IAI47_17985	0.64	-1.7
3,820,452	-		IAI47_17985	0.64	-2.1
3,820,452	-		IAI47_17985	0.64	-2.3
3,820,452	-		IAI47_17985	0.64	-1.4
3,820,452	-		IAI47_17985	0.64	-0.3
3,820,452	-		IAI47_17985	0.64	-1.1
3,820,452	-		IAI47_17985	0.64	+0.1
3,820,452	-		IAI47_17985	0.64	-2.0
3,820,452	-		IAI47_17985	0.64	-2.1
3,820,452	-		IAI47_17985	0.64	-2.9
3,820,452	-		IAI47_17985	0.64	+0.1
3,820,452	-		IAI47_17985	0.64	+0.8
3,820,452	-		IAI47_17985	0.64	-0.9
3,820,452	-		IAI47_17985	0.64	-0.7
3,820,452	-		IAI47_17985	0.64	+0.7
3,820,452	-		IAI47_17985	0.64	+0.4
3,820,452	-		IAI47_17985	0.64	-1.1
3,820,452	-		IAI47_17985	0.64	-1.0
3,820,455	+		IAI47_17985	0.64	+0.5
3,820,455	+		IAI47_17985	0.64	-0.1
3,820,455	+		IAI47_17985	0.64	-1.2
3,820,455	+		IAI47_17985	0.64	-2.0
3,820,456	-		IAI47_17985	0.64	-1.5
3,820,456	-		IAI47_17985	0.64	-1.9
3,820,456	-		IAI47_17985	0.64	-1.8
3,820,456	-		IAI47_17985	0.64	+0.5
3,820,456	-		IAI47_17985	0.64	-4.1
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3,820,456	-		IAI47_17985	0.64	-1.1
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