Strain Fitness in Pantoea sp. MT58 around IAI47_17785

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
3,775,354	-				+1.3
3,775,367	+				-0.1
3,775,368	-				-0.7
3,775,369	+				+0.1
3,775,369	+				-0.7
3,775,369	+				-0.8
3,775,370	-				-0.6
3,775,370	-				+0.2
3,775,370	-				-0.5
3,775,370	-				-0.0
3,775,370	-				+0.0
3,775,385	+				-2.2
3,775,410	+				-1.3
3,775,410	+				-1.3
3,775,410	+				+0.4
3,775,410	+				+0.5
3,775,411	-				+1.1
3,775,411	-				-0.8
3,775,411	-				+1.1
3,775,413	+				-0.1
3,775,413	+				+1.5
3,775,413	+				+1.0
3,775,413	+				-2.6
3,775,413	+				-1.0
3,775,414	-				+0.3
3,775,414	-				+0.8
3,775,470	+				-1.2
3,775,470	+				+0.3
3,775,470	+				-0.2
3,775,470	+				-0.4
3,775,470	+				-3.5
3,775,471	-				-0.5
3,775,471	-				-0.6
3,775,471	-				+0.3
3,775,471	-				-0.5
3,775,471	-				-0.1
3,775,489	+		IAI47_17780	0.11	+0.6
3,775,502	-		IAI47_17780	0.12	+0.4
3,775,502	-		IAI47_17780	0.12	+0.2
3,775,502	-		IAI47_17780	0.12	+0.4
3,775,502	-		IAI47_17780	0.12	+0.4
3,775,550	+		IAI47_17780	0.17	+1.5
3,775,551	-		IAI47_17780	0.18	+0.5
3,775,551	-		IAI47_17780	0.18	+0.1
3,775,551	-		IAI47_17780	0.18	+0.1
3,775,569	+		IAI47_17780	0.19	-0.2
3,775,569	+		IAI47_17780	0.19	+0.5
3,775,569	+		IAI47_17780	0.19	-0.8
3,775,569	+		IAI47_17780	0.19	+1.1
3,775,569	+		IAI47_17780	0.19	+2.1
3,775,569	+		IAI47_17780	0.19	-0.1
3,775,570	-		IAI47_17780	0.20	+2.1
3,775,570	-		IAI47_17780	0.20	+1.2
3,775,570	-		IAI47_17780	0.20	-1.8
3,775,571	+		IAI47_17780	0.20	+0.7
3,775,571	+		IAI47_17780	0.20	-0.7
3,775,571	+		IAI47_17780	0.20	-0.6
3,775,571	+		IAI47_17780	0.20	-0.4
3,775,571	+		IAI47_17780	0.20	-1.9
3,775,571	+		IAI47_17780	0.20	+0.9
3,775,571	+		IAI47_17780	0.20	+0.4
3,775,571	+		IAI47_17780	0.20	+0.1
3,775,571	+		IAI47_17780	0.20	+0.5
3,775,572	-		IAI47_17780	0.20	-0.4
3,775,572	-		IAI47_17780	0.20	-0.9
3,775,572	-		IAI47_17780	0.20	+0.0
3,775,572	-		IAI47_17780	0.20	+0.1
3,775,572	-		IAI47_17780	0.20	+3.3
3,775,572	-		IAI47_17780	0.20	+0.6
3,775,572	-		IAI47_17780	0.20	+1.4
3,775,572	-		IAI47_17780	0.20	-0.3
3,775,585	+		IAI47_17780	0.21	+0.2
3,775,585	+		IAI47_17780	0.21	-1.2
3,775,585	+		IAI47_17780	0.21	+0.4
3,775,585	+		IAI47_17780	0.21	+1.7
3,775,585	+		IAI47_17780	0.21	+0.6
3,775,585	+		IAI47_17780	0.21	-0.1
3,775,586	-		IAI47_17780	0.21	+1.9
3,775,586	-		IAI47_17780	0.21	-0.1
3,775,586	-		IAI47_17780	0.21	-0.7
3,775,586	-		IAI47_17780	0.21	+0.1
3,775,586	-		IAI47_17780	0.21	+2.1
3,775,586	-		IAI47_17780	0.21	-1.5
3,775,586	-		IAI47_17780	0.21	-0.2
3,775,586	-		IAI47_17780	0.21	+0.5
3,775,589	+		IAI47_17780	0.22	-0.6
3,775,590	-		IAI47_17780	0.22	-0.9
3,775,615	-		IAI47_17780	0.24	+0.4
3,775,615	-		IAI47_17780	0.24	+3.2
3,775,647	+		IAI47_17780	0.28	-0.5
3,775,647	+		IAI47_17780	0.28	-1.1
3,775,647	+		IAI47_17780	0.28	+1.9
3,775,647	+		IAI47_17780	0.28	-0.1
3,775,648	-		IAI47_17780	0.28	+0.2
3,775,688	+		IAI47_17780	0.32	+0.4
3,775,688	+		IAI47_17780	0.32	-0.5
3,775,688	+		IAI47_17780	0.32	-0.6
3,775,689	-		IAI47_17780	0.32	+0.7
3,775,689	-		IAI47_17780	0.32	-1.2
3,775,713	-		IAI47_17780	0.35	-0.1
3,775,748	+		IAI47_17780	0.38	-0.7
3,775,748	+		IAI47_17780	0.38	-0.7
3,775,748	+		IAI47_17780	0.38	+0.1
3,775,748	+		IAI47_17780	0.38	+0.5
3,775,748	+		IAI47_17780	0.38	+1.3
3,775,748	+		IAI47_17780	0.38	-0.6
3,775,749	-		IAI47_17780	0.38	+2.9
3,775,749	-		IAI47_17780	0.38	+0.3
3,775,749	-		IAI47_17780	0.38	-0.5
3,775,749	-		IAI47_17780	0.38	+0.4
3,775,749	-		IAI47_17780	0.38	-0.0
3,775,749	-		IAI47_17780	0.38	-0.7
3,775,766	+		IAI47_17780	0.40	+0.9
3,775,766	+		IAI47_17780	0.40	-0.0
3,775,766	+		IAI47_17780	0.40	-0.7
3,775,766	+		IAI47_17780	0.40	-1.5
3,775,766	+		IAI47_17780	0.40	+0.4
3,775,766	+		IAI47_17780	0.40	-1.2
3,775,767	-		IAI47_17780	0.40	+0.2
3,775,767	-		IAI47_17780	0.40	+1.9
3,775,767	-		IAI47_17780	0.40	+0.2
3,775,767	-		IAI47_17780	0.40	+1.0
3,775,767	-		IAI47_17780	0.40	-0.0
3,775,797	+		IAI47_17780	0.43	-2.0
3,775,797	+		IAI47_17780	0.43	+2.0
3,775,798	-		IAI47_17780	0.44	+0.9
3,775,798	-		IAI47_17780	0.44	+1.5
3,775,798	-		IAI47_17780	0.44	-0.0
3,775,798	-		IAI47_17780	0.44	+1.2
3,775,798	-		IAI47_17780	0.44	+0.7
3,775,798	-		IAI47_17780	0.44	-0.1
3,775,808	+		IAI47_17780	0.45	+1.5
3,775,808	+		IAI47_17780	0.45	-2.5
3,775,808	+		IAI47_17780	0.45	+0.5
3,775,808	+		IAI47_17780	0.45	+0.4
3,775,809	-		IAI47_17780	0.45	+0.1
3,775,809	-		IAI47_17780	0.45	+0.1
3,775,809	-		IAI47_17780	0.45	+1.5
3,775,809	-		IAI47_17780	0.45	+1.7
3,775,841	+		IAI47_17780	0.48	-1.0
3,775,841	+		IAI47_17780	0.48	+0.1
3,775,841	+		IAI47_17780	0.48	+0.7
3,775,841	+		IAI47_17780	0.48	+1.7
3,775,841	+		IAI47_17780	0.48	-0.1
3,775,841	+		IAI47_17780	0.48	-0.5
3,775,841	+		IAI47_17780	0.48	+1.5
3,775,842	-		IAI47_17780	0.48	-0.5
3,775,842	-		IAI47_17780	0.48	+0.2
3,775,842	-		IAI47_17780	0.48	+0.5
3,775,842	-		IAI47_17780	0.48	-0.7
3,775,842	-		IAI47_17780	0.48	-0.5
3,775,842	-		IAI47_17780	0.48	+0.3
3,775,842	-		IAI47_17780	0.48	-0.5
3,775,842	-		IAI47_17780	0.48	-1.8
3,775,842	-		IAI47_17780	0.48	+0.7
3,775,857	+		IAI47_17780	0.50	-0.6
3,775,857	+		IAI47_17780	0.50	-0.8
3,775,857	+		IAI47_17780	0.50	-0.0
3,775,857	+		IAI47_17780	0.50	+1.3
3,775,858	-		IAI47_17780	0.50	+0.8
3,775,858	-		IAI47_17780	0.50	-0.2
3,775,858	-		IAI47_17780	0.50	+1.3
3,775,858	-		IAI47_17780	0.50	-1.0
3,775,858	-		IAI47_17780	0.50	-0.7
3,775,871	+		IAI47_17780	0.51	+0.7
3,775,871	+		IAI47_17780	0.51	+0.1
3,775,871	+		IAI47_17780	0.51	+3.5
3,775,872	-		IAI47_17780	0.51	-1.9
3,775,872	-		IAI47_17780	0.51	-0.9
3,775,872	-		IAI47_17780	0.51	-1.0
3,775,925	+		IAI47_17780	0.57	-1.0
3,775,926	-		IAI47_17780	0.57	+0.5
3,776,036	-		IAI47_17780	0.69	-0.0
3,776,036	-		IAI47_17780	0.69	-0.1
3,776,071	+		IAI47_17780	0.72	+0.1
3,776,071	+		IAI47_17780	0.72	+0.5
3,776,072	-		IAI47_17780	0.72	-0.5
3,776,087	+		IAI47_17780	0.74	-1.0
3,776,087	+		IAI47_17780	0.74	-0.4
3,776,087	+		IAI47_17780	0.74	-0.0
3,776,087	+		IAI47_17780	0.74	+0.1
3,776,088	-		IAI47_17780	0.74	+1.1
3,776,088	-		IAI47_17780	0.74	-0.5
3,776,129	+		IAI47_17780	0.78	+0.6
3,776,129	+		IAI47_17780	0.78	-1.5
3,776,129	+		IAI47_17780	0.78	+0.9
3,776,130	-		IAI47_17780	0.78	-0.8
3,776,130	-		IAI47_17780	0.78	+0.5
3,776,133	+		IAI47_17780	0.79	+0.3
3,776,133	+		IAI47_17780	0.79	+0.1
3,776,133	+		IAI47_17780	0.79	+2.0
3,776,133	+		IAI47_17780	0.79	-2.0
3,776,133	+		IAI47_17780	0.79	+1.3
3,776,133	+		IAI47_17780	0.79	+1.3
3,776,133	+		IAI47_17780	0.79	-0.1
3,776,133	+		IAI47_17780	0.79	+1.1
3,776,133	+		IAI47_17780	0.79	-0.8
3,776,133	+		IAI47_17780	0.79	+3.0
3,776,133	+		IAI47_17780	0.79	+0.1
3,776,133	+		IAI47_17780	0.79	+0.5
3,776,134	-		IAI47_17780	0.79	-0.9
3,776,134	-		IAI47_17780	0.79	+0.1
3,776,134	-		IAI47_17780	0.79	+0.1
3,776,134	-		IAI47_17780	0.79	+1.3
3,776,134	-		IAI47_17780	0.79	+0.1
3,776,134	-		IAI47_17780	0.79	-0.3
3,776,150	+		IAI47_17780	0.81	+1.5
3,776,150	+		IAI47_17780	0.81	+4.3
3,776,150	+		IAI47_17780	0.81	+1.3
3,776,151	-		IAI47_17780	0.81	+0.5
3,776,172	+		IAI47_17780	0.83	-1.6
3,776,172	+		IAI47_17780	0.83	+0.3
3,776,173	-		IAI47_17780	0.83	-0.0
3,776,178	+		IAI47_17780	0.83	+0.3
3,776,178	+		IAI47_17780	0.83	-0.3
3,776,178	+		IAI47_17780	0.83	-0.8
3,776,178	+		IAI47_17780	0.83	+0.5
3,776,179	-		IAI47_17780	0.84	-0.6
3,776,183	+		IAI47_17780	0.84	-0.3
3,776,183	+		IAI47_17780	0.84	-0.4
3,776,184	-		IAI47_17780	0.84	+0.5
3,776,184	-		IAI47_17780	0.84	-1.2
3,776,184	-		IAI47_17780	0.84	-0.4
3,776,249	+				+0.0
3,776,249	+				-1.0
3,776,249	+				-0.0
3,776,249	+				-0.3
3,776,250	-				-2.0
3,776,250	-				-0.4
3,776,252	+				+0.5
3,776,252	+				-0.5
3,776,252	+				-0.2
3,776,253	-				+0.3
3,776,253	-				-1.2
3,776,253	-				+0.1
3,776,253	-				+0.9
3,776,267	+				-0.4
3,776,268	-				+2.0
3,776,268	-				+2.0
3,776,286	+				+1.4
3,776,287	-				-0.1
3,776,287	-				-0.8
3,776,287	-				+0.5
3,776,287	-				+1.1
3,776,289	+				-1.8
3,776,290	-				-1.2
3,776,290	-				-0.6
3,776,294	+				-0.9
3,776,294	+				-0.7
3,776,294	+				-0.5
3,776,294	+				+1.2
3,776,295	-				+0.5
3,776,295	-				+1.2
3,776,334	+				+1.3
3,776,334	+				+1.5
3,776,334	+				+0.0
3,776,334	+				-0.2
3,776,334	+				-0.3
3,776,334	+				+0.9
3,776,335	-				-1.2
3,776,335	-				+2.1
3,776,335	-				+0.7
3,776,335	-				+0.5
3,776,335	-				-0.1
3,776,335	-				-1.5
3,776,335	-				-0.3
3,776,335	-				-1.4
3,776,351	-				-3.0
3,776,351	-				-2.8
3,776,351	-				-3.2
3,776,359	+				+0.5
3,776,359	+				-0.6
3,776,402	+				-0.8
3,776,410	+				-0.6
3,776,410	+				+1.3
3,776,410	+				-1.0
3,776,411	-				-1.5
3,776,411	-				-3.4
3,776,411	-				-2.8
3,776,419	-				-4.0
3,776,541	+		IAI47_17785	0.16	+1.2
3,776,541	+		IAI47_17785	0.16	+2.1
3,776,541	+		IAI47_17785	0.16	+1.0
3,776,541	+		IAI47_17785	0.16	-0.2
3,776,541	+		IAI47_17785	0.16	-0.5
3,776,541	+		IAI47_17785	0.16	-1.1
3,776,542	-		IAI47_17785	0.16	-2.6
3,776,542	-		IAI47_17785	0.16	-1.8
3,776,542	-		IAI47_17785	0.16	-3.4
3,776,542	-		IAI47_17785	0.16	-1.4
3,776,542	-		IAI47_17785	0.16	-1.0
3,776,542	-		IAI47_17785	0.16	-2.0
3,776,545	+		IAI47_17785	0.16	+0.8
3,776,545	+		IAI47_17785	0.16	-1.0
3,776,545	+		IAI47_17785	0.16	-1.5
3,776,546	-		IAI47_17785	0.16	-1.5
3,776,546	-		IAI47_17785	0.16	-1.9
3,776,549	+		IAI47_17785	0.16	-2.0
3,776,549	+		IAI47_17785	0.16	-0.2
3,776,550	-		IAI47_17785	0.16	-3.6
3,776,550	-		IAI47_17785	0.16	-2.4
3,776,572	+		IAI47_17785	0.18	+0.5
3,776,572	+		IAI47_17785	0.18	+2.1
3,776,572	+		IAI47_17785	0.18	-0.5
3,776,572	+		IAI47_17785	0.18	+1.0
3,776,572	+		IAI47_17785	0.18	+0.5
3,776,572	+		IAI47_17785	0.18	-1.4
3,776,573	-		IAI47_17785	0.18	-2.7
3,776,573	-		IAI47_17785	0.18	-4.1
3,776,573	-		IAI47_17785	0.18	-2.2
3,776,573	-		IAI47_17785	0.18	-4.7
3,776,573	-		IAI47_17785	0.18	-2.8
3,776,578	+		IAI47_17785	0.19	-2.7
3,776,579	-		IAI47_17785	0.19	-1.6
3,776,583	+		IAI47_17785	0.19	-2.4
3,776,583	+		IAI47_17785	0.19	-0.3
3,776,583	+		IAI47_17785	0.19	-0.7
3,776,583	+		IAI47_17785	0.19	-0.4
3,776,584	-		IAI47_17785	0.19	-2.7
3,776,584	-		IAI47_17785	0.19	-2.3
3,776,584	-		IAI47_17785	0.19	-3.8
3,776,584	-		IAI47_17785	0.19	-2.2
3,776,627	+		IAI47_17785	0.23	+0.8
3,776,627	+		IAI47_17785	0.23	+1.1
3,776,627	+		IAI47_17785	0.23	-0.2
3,776,627	+		IAI47_17785	0.23	+0.8
3,776,627	+		IAI47_17785	0.23	+0.1
3,776,627	+		IAI47_17785	0.23	+0.5
3,776,628	-		IAI47_17785	0.23	-2.5
3,776,628	-		IAI47_17785	0.23	-3.6
3,776,628	-		IAI47_17785	0.23	-2.9
3,776,628	-		IAI47_17785	0.23	-4.3
3,776,650	+		IAI47_17785	0.24	-1.5
3,776,650	+		IAI47_17785	0.24	+0.5
3,776,651	-		IAI47_17785	0.25	-3.3
3,776,651	-		IAI47_17785	0.25	-2.1
3,776,651	-		IAI47_17785	0.25	-1.9
3,776,663	-		IAI47_17785	0.25	-4.1
3,776,663	-		IAI47_17785	0.25	-2.5
3,776,663	-		IAI47_17785	0.25	-4.3
3,776,663	-		IAI47_17785	0.25	-1.7
3,776,689	+		IAI47_17785	0.28	-1.0
3,776,689	+		IAI47_17785	0.28	-1.3
3,776,689	+		IAI47_17785	0.28	-0.6
3,776,689	+		IAI47_17785	0.28	+1.3
3,776,689	+		IAI47_17785	0.28	-0.5
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