Strain Fitness in Pantoea sp. MT58 around IAI47_17140

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
3,630,782	+		IAI47_17130	0.35	-0.3
3,630,782	+		IAI47_17130	0.35	-0.2
3,630,783	-		IAI47_17130	0.35	-0.4
3,630,859	+		IAI47_17130	0.47	-0.5
3,630,859	+		IAI47_17130	0.47	-1.8
3,630,859	+		IAI47_17130	0.47	-0.9
3,630,859	+		IAI47_17130	0.47	+0.3
3,630,859	+		IAI47_17130	0.47	-0.8
3,630,859	+		IAI47_17130	0.47	-1.4
3,630,860	-		IAI47_17130	0.47	+0.5
3,630,860	-		IAI47_17130	0.47	-1.1
3,630,860	-		IAI47_17130	0.47	-2.4
3,630,860	-		IAI47_17130	0.47	-1.7
3,630,860	-		IAI47_17130	0.47	-2.6
3,630,860	-		IAI47_17130	0.47	-0.4
3,630,860	-		IAI47_17130	0.47	-0.9
3,630,880	+		IAI47_17130	0.51	-1.2
3,630,880	+		IAI47_17130	0.51	-0.7
3,630,880	+		IAI47_17130	0.51	-1.1
3,630,881	-		IAI47_17130	0.51	-1.2
3,630,881	-		IAI47_17130	0.51	-1.0
3,630,881	-		IAI47_17130	0.51	-1.0
3,630,895	+		IAI47_17130	0.53	-2.6
3,630,896	-		IAI47_17130	0.53	-0.8
3,630,916	+		IAI47_17130	0.56	-0.4
3,630,917	-		IAI47_17130	0.56	-0.5
3,630,917	-		IAI47_17130	0.56	-0.9
3,630,949	+		IAI47_17130	0.61	-0.9
3,630,949	+		IAI47_17130	0.61	-1.4
3,630,949	+		IAI47_17130	0.61	+0.4
3,630,949	+		IAI47_17130	0.61	+1.5
3,630,949	+		IAI47_17130	0.61	-1.1
3,630,950	-		IAI47_17130	0.62	-0.5
3,630,952	+		IAI47_17130	0.62	+0.1
3,630,952	+		IAI47_17130	0.62	-0.1
3,630,952	+				+0.5
3,630,952	+		IAI47_17130	0.62	-1.3
3,630,953	-		IAI47_17130	0.62	-1.6
3,630,953	-		IAI47_17130	0.62	-0.6
3,630,953	-		IAI47_17130	0.62	-1.9
3,630,953	-		IAI47_17130	0.62	-2.0
3,630,953	-		IAI47_17130	0.62	-1.1
3,630,979	+		IAI47_17130	0.66	-0.8
3,630,979	+		IAI47_17130	0.66	+0.4
3,630,979	+		IAI47_17130	0.66	-0.1
3,630,980	-		IAI47_17130	0.66	+0.5
3,630,980	-		IAI47_17130	0.66	+1.6
3,630,983	+		IAI47_17130	0.67	+0.5
3,630,983	+		IAI47_17130	0.67	-0.6
3,630,984	-		IAI47_17130	0.67	-0.7
3,630,984	-		IAI47_17130	0.67	+0.0
3,630,984	-		IAI47_17130	0.67	-1.4
3,630,984	-		IAI47_17130	0.67	+2.1
3,630,984	-		IAI47_17130	0.67	-0.7
3,630,984	-		IAI47_17130	0.67	-1.9
3,630,994	+		IAI47_17130	0.69	-1.1
3,630,994	+		IAI47_17130	0.69	-1.1
3,630,994	+		IAI47_17130	0.69	-1.8
3,630,994	+		IAI47_17130	0.69	+0.9
3,630,994	+		IAI47_17130	0.69	-0.3
3,630,994	+		IAI47_17130	0.69	+0.5
3,630,994	+		IAI47_17130	0.69	-1.8
3,630,994	+		IAI47_17130	0.69	-0.9
3,630,994	+		IAI47_17130	0.69	-0.3
3,630,994	+		IAI47_17130	0.69	+0.8
3,630,995	-		IAI47_17130	0.69	-0.5
3,630,995	-		IAI47_17130	0.69	+0.9
3,630,995	-		IAI47_17130	0.69	-0.6
3,630,995	-		IAI47_17130	0.69	-1.1
3,630,995	-		IAI47_17130	0.69	-1.6
3,630,995	-		IAI47_17130	0.69	-2.2
3,630,995	-		IAI47_17130	0.69	-0.3
3,631,030	+		IAI47_17130	0.74	-0.7
3,631,030	+		IAI47_17130	0.74	-3.8
3,631,030	+		IAI47_17130	0.74	-1.4
3,631,030	+		IAI47_17130	0.74	-1.1
3,631,030	+		IAI47_17130	0.74	+0.0
3,631,030	+		IAI47_17130	0.74	+0.3
3,631,030	+		IAI47_17130	0.74	-2.8
3,631,111	+		IAI47_17130	0.87	-2.9
3,631,111	+		IAI47_17130	0.87	-1.2
3,631,112	-		IAI47_17130	0.87	-0.7
3,631,112	-		IAI47_17130	0.87	-4.1
3,631,112	-		IAI47_17130	0.87	-1.4
3,631,179	+				-2.7
3,631,180	-				-1.1
3,631,180	-				+2.1
3,631,180	-				+1.6
3,631,187	+				-0.1
3,631,187	+				-0.2
3,631,187	+				-1.3
3,631,188	-				-2.3
3,631,188	-				-0.5
3,631,188	-				-0.0
3,631,196	+				-1.2
3,631,196	+				-0.4
3,631,196	+				-0.9
3,631,197	-				-1.6
3,631,197	-				+0.2
3,631,197	-				-0.1
3,631,197	-				-0.4
3,631,197	-				-1.4
3,631,210	+				-0.7
3,631,210	+				-2.7
3,631,211	-				-0.2
3,631,211	-				-0.1
3,631,211	-				+0.3
3,631,295	+		IAI47_17135	0.16	-0.8
3,631,295	+		IAI47_17135	0.16	+0.9
3,631,295	+		IAI47_17135	0.16	-3.6
3,631,296	-		IAI47_17135	0.16	-0.3
3,631,296	-		IAI47_17135	0.16	-1.8
3,631,297	+		IAI47_17135	0.16	-1.3
3,631,297	+		IAI47_17135	0.16	-0.2
3,631,297	+		IAI47_17135	0.16	-0.9
3,631,298	-		IAI47_17135	0.16	-2.1
3,631,343	+		IAI47_17135	0.25	-1.6
3,631,343	+		IAI47_17135	0.25	-0.7
3,631,344	-		IAI47_17135	0.25	-0.5
3,631,344	-		IAI47_17135	0.25	-2.3
3,631,344	-		IAI47_17135	0.25	-1.8
3,631,356	-		IAI47_17135	0.27	-0.1
3,631,356	-		IAI47_17135	0.27	-0.1
3,631,404	+		IAI47_17135	0.36	-1.1
3,631,404	+		IAI47_17135	0.36	+0.5
3,631,445	+		IAI47_17135	0.43	+0.3
3,631,445	+		IAI47_17135	0.43	-0.8
3,631,445	+		IAI47_17135	0.43	-1.0
3,631,466	+		IAI47_17135	0.47	+1.0
3,631,467	-		IAI47_17135	0.47	-0.6
3,631,486	+		IAI47_17135	0.51	-1.5
3,631,486	+		IAI47_17135	0.51	-1.1
3,631,487	-		IAI47_17135	0.51	-1.9
3,631,487	-		IAI47_17135	0.51	-0.3
3,631,487	-		IAI47_17135	0.51	-0.5
3,631,542	+		IAI47_17135	0.61	-0.7
3,631,542	+		IAI47_17135	0.61	-4.1
3,631,542	+		IAI47_17135	0.61	-0.6
3,631,543	-		IAI47_17135	0.61	+0.3
3,631,610	+		IAI47_17135	0.73	-1.4
3,631,662	+		IAI47_17135	0.83	-0.8
3,631,663	-		IAI47_17135	0.83	+0.7
3,631,663	-		IAI47_17135	0.83	-1.5
3,631,709	+				-2.2
3,631,709	+				-1.3
3,631,709	+				-2.1
3,631,709	+				-0.4
3,631,709	+				+0.8
3,631,710	-				-1.4
3,631,716	-				-2.1
3,631,716	-				-0.6
3,631,822	+				-0.1
3,631,822	+				-1.7
3,631,822	+				-0.3
3,631,822	+				-0.8
3,631,822	+				-1.5
3,631,822	+				-0.8
3,631,822	+				-1.6
3,631,822	+				-2.6
3,631,822	+				-4.4
3,631,822	+				-1.2
3,631,822	+				+2.5
3,631,822	+				-0.8
3,631,822	+				-0.6
3,631,823	-				-1.7
3,631,823	-				-1.7
3,631,823	-				-1.1
3,631,823	-				+1.7
3,631,823	-				+1.7
3,631,823	-				-0.5
3,631,823	-				-1.6
3,631,823	-				-1.1
3,631,823	-				-0.9
3,631,823	-				-0.8
3,631,823	-				-1.6
3,631,823	-				-0.5
3,631,823	-				-1.5
3,631,823	-				-0.8
3,631,825	+				-3.1
3,631,825	+				-1.7
3,631,825	+				+0.5
3,631,825	+				-1.3
3,631,825	+				-1.1
3,631,825	+				-0.2
3,631,825	+				-0.9
3,631,825	+				-0.9
3,631,826	-				-0.8
3,631,826	-				+0.4
3,631,826	-				-1.7
3,631,877	+		IAI47_17140	0.15	+1.5
3,631,877	+		IAI47_17140	0.15	+1.5
3,631,885	-		IAI47_17140	0.16	-1.9
3,631,885	-		IAI47_17140	0.16	-0.3
3,631,885	-		IAI47_17140	0.16	-1.2
3,631,941	+		IAI47_17140	0.23	-1.5
3,631,941	+		IAI47_17140	0.23	-1.7
3,631,942	-		IAI47_17140	0.23	-1.2
3,631,942	-		IAI47_17140	0.23	-1.7
3,631,942	-		IAI47_17140	0.23	-0.9
3,631,977	+		IAI47_17140	0.28	-2.6
3,631,977	+		IAI47_17140	0.28	+0.2
3,631,977	+		IAI47_17140	0.28	-0.3
3,631,978	-		IAI47_17140	0.28	+0.0
3,631,978	-		IAI47_17140	0.28	-0.9
3,631,978	-		IAI47_17140	0.28	-1.5
3,631,978	-		IAI47_17140	0.28	+1.5
3,632,043	+		IAI47_17140	0.36	-1.2
3,632,044	-		IAI47_17140	0.36	-0.3
3,632,044	-		IAI47_17140	0.36	-0.5
3,632,085	+		IAI47_17140	0.42	-0.7
3,632,085	+		IAI47_17140	0.42	-0.2
3,632,086	-		IAI47_17140	0.42	-0.9
3,632,114	-		IAI47_17140	0.45	+0.1
3,632,148	+		IAI47_17140	0.50	-0.2
3,632,232	+		IAI47_17140	0.60	-0.2
3,632,278	-		IAI47_17140	0.66	+0.9
3,632,300	+		IAI47_17140	0.69	-1.2
3,632,300	+		IAI47_17140	0.69	-1.8
3,632,300	+		IAI47_17140	0.69	-0.9
3,632,300	+		IAI47_17140	0.69	-2.8
3,632,300	+		IAI47_17140	0.69	-1.4
3,632,300	+		IAI47_17140	0.69	-0.2
3,632,300	+		IAI47_17140	0.69	-2.7
3,632,300	+		IAI47_17140	0.69	-0.7
3,632,300	+		IAI47_17140	0.69	-0.6
3,632,300	+		IAI47_17140	0.69	+0.9
3,632,300	+		IAI47_17140	0.69	-0.2
3,632,300	+		IAI47_17140	0.69	-0.2
3,632,300	+		IAI47_17140	0.69	-0.6
3,632,301	-		IAI47_17140	0.69	+0.5
3,632,301	-		IAI47_17140	0.69	-1.0
3,632,301	-		IAI47_17140	0.69	-4.4
3,632,301	-		IAI47_17140	0.69	-1.5
3,632,301	-		IAI47_17140	0.69	-0.3
3,632,301	-		IAI47_17140	0.69	+1.5
3,632,301	-		IAI47_17140	0.69	-0.2
3,632,301	-		IAI47_17140	0.69	-0.3
3,632,301	-		IAI47_17140	0.69	+0.1
3,632,301	-		IAI47_17140	0.69	-1.1
3,632,301	-		IAI47_17140	0.69	-0.9
3,632,318	+		IAI47_17140	0.71	-0.8
3,632,318	+		IAI47_17140	0.71	-1.4
3,632,319	-		IAI47_17140	0.72	-0.9
3,632,319	-		IAI47_17140	0.72	-0.7
3,632,335	+		IAI47_17140	0.74	-1.5
3,632,335	+		IAI47_17140	0.74	-0.0
3,632,336	-		IAI47_17140	0.74	-1.6
3,632,336	-		IAI47_17140	0.74	-0.8
3,632,336	-		IAI47_17140	0.74	-1.1
3,632,367	+		IAI47_17140	0.78	-1.3
3,632,367	+		IAI47_17140	0.78	-0.4
3,632,367	+		IAI47_17140	0.78	-1.5
3,632,367	+		IAI47_17140	0.78	-0.1
3,632,368	-		IAI47_17140	0.78	-0.3
3,632,368	-		IAI47_17140	0.78	+0.3
3,632,368	-		IAI47_17140	0.78	-1.4
3,632,368	-		IAI47_17140	0.78	-1.9
3,632,374	+		IAI47_17140	0.79	+0.7
3,632,383	+		IAI47_17140	0.80	-0.5
3,632,383	+		IAI47_17140	0.80	-0.9
3,632,384	-		IAI47_17140	0.80	-1.1
3,632,384	-		IAI47_17140	0.80	+1.5
3,632,394	+		IAI47_17140	0.81	-3.5
3,632,394	+		IAI47_17140	0.81	+0.3
3,632,394	+		IAI47_17140	0.81	-1.5
3,632,394	+		IAI47_17140	0.81	-0.3
3,632,394	+		IAI47_17140	0.81	-0.3
3,632,394	+		IAI47_17140	0.81	-1.5
3,632,395	-		IAI47_17140	0.81	-1.5
3,632,395	-		IAI47_17140	0.81	+0.7
3,632,395	-		IAI47_17140	0.81	-1.0
3,632,395	-		IAI47_17140	0.81	-0.2
3,632,395	-		IAI47_17140	0.81	-1.3
3,632,395	-		IAI47_17140	0.81	+0.0
3,632,395	-		IAI47_17140	0.81	-1.3
3,632,396	+		IAI47_17140	0.81	-0.9
3,632,396	+		IAI47_17140	0.81	+0.5
3,632,396	+		IAI47_17140	0.81	-2.9
3,632,396	+		IAI47_17140	0.81	+1.5
3,632,397	-		IAI47_17140	0.81	-1.1
3,632,397	-		IAI47_17140	0.81	-1.4
3,632,397	-		IAI47_17140	0.81	-0.5
3,632,397	-		IAI47_17140	0.81	-1.0
3,632,397	-		IAI47_17140	0.81	-0.3
3,632,397	-		IAI47_17140	0.81	-1.9
3,632,414	-		IAI47_17140	0.84	-0.1
3,632,421	+		IAI47_17140	0.85	+0.1
3,632,421	+		IAI47_17140	0.85	-0.9
3,632,421	+		IAI47_17140	0.85	-3.1
3,632,421	+		IAI47_17140	0.85	-0.8
3,632,421	+		IAI47_17140	0.85	-0.6
3,632,422	-		IAI47_17140	0.85	+1.0
3,632,422	-		IAI47_17140	0.85	-1.9
3,632,422	-		IAI47_17140	0.85	-1.0
3,632,422	-		IAI47_17140	0.85	-0.3
3,632,422	-		IAI47_17140	0.85	-1.8
3,632,422	-		IAI47_17140	0.85	-4.4
3,632,467	+				-1.0
3,632,467	+				-1.3
3,632,467	+				-1.0
3,632,468	-				+2.3
3,632,468	-				+0.9
3,632,468	-				-0.4
3,632,468	-				-1.0
3,632,547	+				-2.3
3,632,547	+				-1.1
3,632,547	+				-1.3
3,632,547	+				-0.9
3,632,548	-				+0.0
3,632,548	-				-1.9
3,632,548	-				+0.9
3,632,548	-				-1.5
3,632,548	-				+0.8
3,632,548	-				-2.7
3,632,551	+				-0.9
3,632,551	+				+0.5
3,632,551	+				-2.1
3,632,552	-				-1.8
3,632,552	-				+0.5
3,632,568	-				+0.1
3,632,580	+				-0.2
3,632,580	+				-1.4
3,632,580	+				+1.2
3,632,581	-				-1.1
3,632,581	-				-0.1
3,632,632	+		IAI47_17145	0.11	+1.8
3,632,656	+		IAI47_17145	0.13	+0.8
3,632,657	-		IAI47_17145	0.14	+2.1
3,632,657	-		IAI47_17145	0.14	+1.4
3,632,713	+		IAI47_17145	0.20	+0.3
3,632,713	+		IAI47_17145	0.20	-0.7
3,632,714	-		IAI47_17145	0.21	+0.5
3,632,714	-		IAI47_17145	0.21	-0.1
3,632,714	-		IAI47_17145	0.21	-1.8
3,632,714	-		IAI47_17145	0.21	-1.1
3,632,715	+		IAI47_17145	0.21	-1.9
3,632,715	+		IAI47_17145	0.21	-0.8
3,632,715	+		IAI47_17145	0.21	-0.9
3,632,715	+		IAI47_17145	0.21	-1.7
3,632,715	+		IAI47_17145	0.21	-2.3
3,632,715	+		IAI47_17145	0.21	-1.2
3,632,715	+		IAI47_17145	0.21	-2.3
3,632,715	+		IAI47_17145	0.21	+0.7
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3,633,406	+		IAI47_17150	0.28	-2.4
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