Strain Fitness in Pantoea sp. MT58 around IAI47_14510

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
3,061,681	+		IAI47_14495	0.77	+0.6
3,061,682	-		IAI47_14495	0.78	+0.6
3,061,682	-		IAI47_14495	0.78	+0.2
3,061,726	+				-0.2
3,061,726	+				+0.0
3,061,726	+				-1.4
3,061,726	+				+1.0
3,061,727	-				+0.6
3,061,727	-				-0.4
3,061,730	+				+0.2
3,061,731	-				-0.4
3,061,731	-				-3.0
3,061,734	+				-1.0
3,061,734	+				+0.3
3,061,734	+				-0.4
3,061,735	-				-0.5
3,061,735	-				-1.4
3,061,735	-				+0.6
3,061,735	-				-1.4
3,061,735	-				+1.2
3,061,800	+		IAI47_14500	0.36	+4.1
3,061,850	-		IAI47_14500	0.69	+1.6
3,061,895	+				+0.1
3,061,895	+				+0.7
3,061,932	+				-2.3
3,061,932	+				+0.1
3,061,932	+				+1.8
3,061,933	-				+3.4
3,061,933	-				-1.1
3,061,933	-				+0.6
3,061,972	+		IAI47_14505	0.12	-0.5
3,061,973	-		IAI47_14505	0.12	-0.6
3,061,973	-		IAI47_14505	0.12	-0.6
3,062,013	+		IAI47_14505	0.19	-1.2
3,062,013	+		IAI47_14505	0.19	+0.6
3,062,013	+		IAI47_14505	0.19	-0.2
3,062,014	-		IAI47_14505	0.19	+0.9
3,062,014	-		IAI47_14505	0.19	+0.2
3,062,014	-		IAI47_14505	0.19	-0.5
3,062,014	-		IAI47_14505	0.19	+0.6
3,062,024	+		IAI47_14505	0.20	+0.4
3,062,024	+		IAI47_14505	0.20	-1.0
3,062,035	-		IAI47_14505	0.22	+0.6
3,062,116	-		IAI47_14505	0.35	+3.1
3,062,120	+		IAI47_14505	0.35	+1.0
3,062,120	+		IAI47_14505	0.35	+0.5
3,062,120	+		IAI47_14505	0.35	+1.6
3,062,120	+		IAI47_14505	0.35	+0.2
3,062,121	-		IAI47_14505	0.36	+4.4
3,062,121	-		IAI47_14505	0.36	+0.2
3,062,121	-		IAI47_14505	0.36	-0.9
3,062,134	+		IAI47_14505	0.38	+0.2
3,062,134	+		IAI47_14505	0.38	+0.2
3,062,135	-		IAI47_14505	0.38	-0.4
3,062,148	+		IAI47_14505	0.40	+1.3
3,062,148	+		IAI47_14505	0.40	+1.1
3,062,148	+		IAI47_14505	0.40	+0.2
3,062,148	+		IAI47_14505	0.40	+0.6
3,062,149	-		IAI47_14505	0.40	-1.3
3,062,149	-		IAI47_14505	0.40	-0.6
3,062,149	-		IAI47_14505	0.40	-0.6
3,062,187	+		IAI47_14505	0.46	-1.3
3,062,188	-		IAI47_14505	0.46	-2.0
3,062,247	+		IAI47_14505	0.55	+0.6
3,062,247	+		IAI47_14505	0.55	+1.8
3,062,247	+		IAI47_14505	0.55	-0.8
3,062,248	-		IAI47_14505	0.55	+0.1
3,062,248	-		IAI47_14505	0.55	+0.3
3,062,249	+		IAI47_14505	0.56	+1.6
3,062,249	+		IAI47_14505	0.56	+2.0
3,062,249	+		IAI47_14505	0.56	-0.4
3,062,249	+		IAI47_14505	0.56	-0.1
3,062,249	+		IAI47_14505	0.56	+3.1
3,062,250	-		IAI47_14505	0.56	+1.0
3,062,291	+		IAI47_14505	0.62	-0.9
3,062,292	-		IAI47_14505	0.62	-0.8
3,062,292	-		IAI47_14505	0.62	+0.4
3,062,347	+		IAI47_14505	0.71	-0.4
3,062,347	+		IAI47_14505	0.71	+1.3
3,062,348	-		IAI47_14505	0.71	+0.3
3,062,348	-		IAI47_14505	0.71	-0.2
3,062,348	-		IAI47_14505	0.71	-0.7
3,062,356	+		IAI47_14505	0.72	-0.0
3,062,357	-		IAI47_14505	0.72	+0.6
3,062,357	-		IAI47_14505	0.72	+0.8
3,062,357	-		IAI47_14505	0.72	-0.1
3,062,359	+		IAI47_14505	0.73	+1.0
3,062,359	+		IAI47_14505	0.73	+2.6
3,062,359	+		IAI47_14505	0.73	+1.7
3,062,359	+		IAI47_14505	0.73	-3.0
3,062,360	-		IAI47_14505	0.73	+0.2
3,062,360	-		IAI47_14505	0.73	-1.2
3,062,360	-		IAI47_14505	0.73	-0.4
3,062,360	-		IAI47_14505	0.73	-0.4
3,062,360	-		IAI47_14505	0.73	-1.1
3,062,360	-		IAI47_14505	0.73	-0.7
3,062,387	+		IAI47_14505	0.77	+0.3
3,062,387	+		IAI47_14505	0.77	-0.5
3,062,388	-		IAI47_14505	0.77	+2.1
3,062,403	+		IAI47_14505	0.80	-0.3
3,062,424	+		IAI47_14505	0.83	-0.3
3,062,424	+		IAI47_14505	0.83	+0.8
3,062,425	-		IAI47_14505	0.83	+0.6
3,062,425	-		IAI47_14505	0.83	+0.6
3,062,532	+				+0.9
3,062,533	-				-0.6
3,062,533	-				-0.8
3,062,556	+				+0.2
3,062,562	+				-1.1
3,062,563	-				-2.3
3,062,563	-				-2.3
3,062,566	+				+1.7
3,062,580	+				-1.4
3,062,580	+				-0.7
3,062,585	-				-1.4
3,062,589	+				-1.2
3,062,589	+				+0.2
3,062,590	-				+1.4
3,062,590	-				-1.4
3,062,663	-				+0.3
3,062,671	-				-2.8
3,062,694	+				-1.8
3,062,759	-				-3.3
3,062,793	+				-1.0
3,062,794	-				-3.1
3,062,794	-				-0.9
3,062,803	+		IAI47_14510	0.11	+0.6
3,062,804	-		IAI47_14510	0.11	-2.4
3,062,804	-		IAI47_14510	0.11	-0.4
3,062,841	+		IAI47_14510	0.14	-0.0
3,062,861	+		IAI47_14510	0.16	-1.6
3,062,896	+		IAI47_14510	0.19	-2.6
3,062,896	+		IAI47_14510	0.19	+0.4
3,062,911	+		IAI47_14510	0.20	-0.9
3,062,917	+		IAI47_14510	0.20	-0.8
3,062,918	-		IAI47_14510	0.20	-0.3
3,062,935	+		IAI47_14510	0.22	-2.2
3,062,935	+		IAI47_14510	0.22	-2.7
3,062,936	-		IAI47_14510	0.22	+0.4
3,062,936	-		IAI47_14510	0.22	-2.8
3,062,972	-		IAI47_14510	0.25	+2.9
3,062,972	-		IAI47_14510	0.25	-0.6
3,062,972	-		IAI47_14510	0.25	-2.0
3,062,975	+		IAI47_14510	0.25	-0.7
3,062,975	+		IAI47_14510	0.25	-3.3
3,062,975	+		IAI47_14510	0.25	-0.6
3,062,975	+		IAI47_14510	0.25	-1.6
3,062,976	-		IAI47_14510	0.25	-1.5
3,062,976	-		IAI47_14510	0.25	-1.0
3,062,976	-		IAI47_14510	0.25	-1.8
3,062,976	-		IAI47_14510	0.25	-1.9
3,062,976	-		IAI47_14510	0.25	-3.1
3,062,976	-		IAI47_14510	0.25	+1.6
3,062,987	+		IAI47_14510	0.26	-1.0
3,062,987	+		IAI47_14510	0.26	-0.0
3,062,987	+		IAI47_14510	0.26	-1.1
3,063,009	+		IAI47_14510	0.28	-1.0
3,063,009	+		IAI47_14510	0.28	-1.8
3,063,010	-		IAI47_14510	0.28	-1.0
3,063,010	-		IAI47_14510	0.28	-1.9
3,063,035	-		IAI47_14510	0.30	-2.4
3,063,035	-		IAI47_14510	0.30	-1.0
3,063,035	-		IAI47_14510	0.30	-1.1
3,063,035	-		IAI47_14510	0.30	-1.1
3,063,035	-		IAI47_14510	0.30	-0.9
3,063,035	-		IAI47_14510	0.30	-1.4
3,063,060	-		IAI47_14510	0.32	+0.1
3,063,060	-		IAI47_14510	0.32	-1.3
3,063,060	-		IAI47_14510	0.32	-1.0
3,063,060	-		IAI47_14510	0.32	-1.2
3,063,061	+		IAI47_14510	0.32	-1.7
3,063,061	+		IAI47_14510	0.32	-2.0
3,063,061	+		IAI47_14510	0.32	-1.9
3,063,061	+		IAI47_14510	0.32	-1.6
3,063,061	+		IAI47_14510	0.32	-1.1
3,063,061	+		IAI47_14510	0.32	-3.4
3,063,061	+		IAI47_14510	0.32	+0.6
3,063,062	-		IAI47_14510	0.32	-2.6
3,063,062	-		IAI47_14510	0.32	-2.2
3,063,062	-		IAI47_14510	0.32	-1.2
3,063,062	-		IAI47_14510	0.32	-2.7
3,063,083	+		IAI47_14510	0.34	+0.6
3,063,083	+		IAI47_14510	0.34	-3.4
3,063,083	+		IAI47_14510	0.34	-0.7
3,063,083	+		IAI47_14510	0.34	-1.2
3,063,083	+		IAI47_14510	0.34	-1.4
3,063,083	+		IAI47_14510	0.34	+1.7
3,063,083	+		IAI47_14510	0.34	-1.4
3,063,083	+		IAI47_14510	0.34	-1.4
3,063,083	+		IAI47_14510	0.34	-1.1
3,063,084	-		IAI47_14510	0.34	-0.6
3,063,084	-		IAI47_14510	0.34	+0.6
3,063,084	-		IAI47_14510	0.34	-1.6
3,063,084	-		IAI47_14510	0.34	-1.8
3,063,084	-		IAI47_14510	0.34	-0.0
3,063,085	+		IAI47_14510	0.34	-2.1
3,063,085	+		IAI47_14510	0.34	-0.1
3,063,085	+		IAI47_14510	0.34	-0.4
3,063,085	+		IAI47_14510	0.34	+0.2
3,063,086	-		IAI47_14510	0.34	-1.4
3,063,086	-		IAI47_14510	0.34	+0.6
3,063,101	+		IAI47_14510	0.36	-1.6
3,063,101	+		IAI47_14510	0.36	+1.8
3,063,102	-		IAI47_14510	0.36	-0.7
3,063,102	-		IAI47_14510	0.36	-1.0
3,063,118	+		IAI47_14510	0.37	-0.8
3,063,119	-		IAI47_14510	0.37	+2.1
3,063,119	-				+0.6
3,063,150	+		IAI47_14510	0.40	-2.4
3,063,150	+		IAI47_14510	0.40	-1.2
3,063,182	-		IAI47_14510	0.42	-1.9
3,063,191	+		IAI47_14510	0.43	-0.7
3,063,191	+		IAI47_14510	0.43	-2.7
3,063,192	-		IAI47_14510	0.43	-0.9
3,063,192	-		IAI47_14510	0.43	-1.3
3,063,211	+		IAI47_14510	0.45	-2.8
3,063,211	+		IAI47_14510	0.45	-2.2
3,063,211	+		IAI47_14510	0.45	-2.3
3,063,211	+		IAI47_14510	0.45	-0.7
3,063,212	-		IAI47_14510	0.45	-1.8
3,063,229	+		IAI47_14510	0.46	-3.3
3,063,230	-		IAI47_14510	0.46	+0.6
3,063,230	-		IAI47_14510	0.46	-1.0
3,063,311	+		IAI47_14510	0.53	-0.7
3,063,311	+		IAI47_14510	0.53	-1.4
3,063,311	+		IAI47_14510	0.53	+1.1
3,063,311	+		IAI47_14510	0.53	-1.5
3,063,311	+		IAI47_14510	0.53	-0.3
3,063,311	+		IAI47_14510	0.53	-0.9
3,063,311	+		IAI47_14510	0.53	-1.7
3,063,311	+		IAI47_14510	0.53	-0.5
3,063,311	+		IAI47_14510	0.53	-3.1
3,063,311	+		IAI47_14510	0.53	-1.5
3,063,312	-		IAI47_14510	0.53	+0.6
3,063,312	-		IAI47_14510	0.53	-0.8
3,063,312	-		IAI47_14510	0.53	-1.3
3,063,312	-		IAI47_14510	0.53	-3.0
3,063,312	-		IAI47_14510	0.53	-1.9
3,063,312	-		IAI47_14510	0.53	-2.8
3,063,312	-		IAI47_14510	0.53	-0.5
3,063,312	-		IAI47_14510	0.53	+0.6
3,063,312	-		IAI47_14510	0.53	-1.9
3,063,312	-		IAI47_14510	0.53	-0.8
3,063,312	-		IAI47_14510	0.53	-0.9
3,063,312	-		IAI47_14510	0.53	-1.7
3,063,312	-		IAI47_14510	0.53	-3.4
3,063,343	+		IAI47_14510	0.56	+0.4
3,063,351	+		IAI47_14510	0.57	-0.5
3,063,351	+		IAI47_14510	0.57	-0.5
3,063,351	+		IAI47_14510	0.57	-0.2
3,063,351	+		IAI47_14510	0.57	-2.0
3,063,351	+		IAI47_14510	0.57	-2.0
3,063,351	+		IAI47_14510	0.57	+0.7
3,063,351	+		IAI47_14510	0.57	+1.6
3,063,352	-		IAI47_14510	0.57	-1.9
3,063,352	-		IAI47_14510	0.57	-2.0
3,063,434	+		IAI47_14510	0.64	-0.4
3,063,435	-		IAI47_14510	0.64	-0.3
3,063,448	+		IAI47_14510	0.65	-0.3
3,063,493	+		IAI47_14510	0.69	-1.6
3,063,493	+		IAI47_14510	0.69	-0.8
3,063,493	+		IAI47_14510	0.69	-2.4
3,063,493	+		IAI47_14510	0.69	-4.6
3,063,494	-		IAI47_14510	0.69	-1.3
3,063,494	-		IAI47_14510	0.69	-1.2
3,063,494	-		IAI47_14510	0.69	-2.6
3,063,494	-		IAI47_14510	0.69	-2.3
3,063,494	-		IAI47_14510	0.69	-2.4
3,063,529	+		IAI47_14510	0.72	-0.6
3,063,529	+		IAI47_14510	0.72	-2.3
3,063,530	-		IAI47_14510	0.72	+0.8
3,063,612	+		IAI47_14510	0.78	-0.7
3,063,613	-		IAI47_14510	0.79	+0.1
3,063,661	+		IAI47_14510	0.83	-3.1
3,063,662	-		IAI47_14510	0.83	-1.4
3,063,734	-		IAI47_14510	0.89	-1.0
3,063,734	-		IAI47_14510	0.89	-2.4
3,063,734	-		IAI47_14510	0.89	-2.9
3,063,867	-				-1.4
3,063,867	-				-3.0
3,063,867	-				-2.9
3,063,890	+				-1.6
3,063,890	+				-0.9
3,063,891	-				+0.1
3,063,891	-				-0.9
3,063,899	+				-0.6
3,063,900	-				-2.4
3,063,987	+				-1.6
3,063,987	+				+1.1
3,063,988	-				-1.3
3,063,988	-				-1.0
3,063,988	-				-3.3
3,064,029	+				-0.8
3,064,029	+				-2.6
3,064,029	+				-1.5
3,064,029	+				-2.9
3,064,029	+				-1.6
3,064,030	-				-2.1
3,064,030	-				-1.4
3,064,030	-				-1.4
3,064,030	-				-2.1
3,064,030	-				-0.1
3,064,030	-				-1.0
3,064,046	+				-0.7
3,064,046	+				-3.9
3,064,046	+				-1.7
3,064,113	+				-0.6
3,064,113	+				+0.2
3,064,113	+				-1.8
3,064,113	+				-0.6
3,064,113	+				-1.5
3,064,113	+				-2.4
3,064,113	+				+1.6
3,064,113	+				-1.5
3,064,113	+				-2.5
3,064,113	+				-1.4
3,064,113	+				-1.6
3,064,113	+				-3.1
3,064,113	+				+0.4
3,064,113	+				+1.1
3,064,113	+				+1.6
3,064,113	+				-1.1
3,064,113	+				-1.6
3,064,113	+				+1.2
3,064,113	+				-3.6
3,064,113	+				-1.7
3,064,113	+				-0.9
3,064,113	+				-1.3
3,064,113	+				-0.7
3,064,113	+				-1.4
3,064,113	+				+0.9
3,064,113	+				+0.6
3,064,113	+				-1.6
3,064,113	+				-2.1
3,064,113	+				+1.6
3,064,113	+				-2.4
3,064,114	-				-1.6
3,064,114	-				-1.4
3,064,114	-				-2.4
3,064,114	-				-2.1
3,064,114	-				-1.4
3,064,114	-				-1.8
3,064,114	-				-2.7
3,064,114	-				-0.9
3,064,114	-				-0.2
3,064,114	-				-0.4
3,064,114	-				-1.6
3,064,114	-				-3.6
3,064,114	-				-2.1
3,064,114	-				-2.0
3,064,114	-				-0.1
3,064,114	-				-1.6
3,064,114	-				-1.6
3,064,114	-				-0.5
3,064,114	-				+0.7
3,064,114	-				-2.8
3,064,114	-				+0.0
3,064,114	-				-1.2
3,064,115	+				-2.5
3,064,115	+				-1.1
3,064,115	+				-1.4
3,064,115	+				-2.9
3,064,115	+				-1.6
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3,064,728	-		IAI47_14515	0.27	-1.2
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3,064,755	-		IAI47_14515	0.28	-1.8
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3,064,863	+		IAI47_14515	0.31	+0.1
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3,064,864	-		IAI47_14515	0.31	+0.2
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3,064,864	-		IAI47_14515	0.31	-0.7
3,064,864	-		IAI47_14515	0.31	-0.4