Strain Fitness in Pantoea sp. MT58 around IAI47_12410

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
2,619,234	+		IAI47_12405	0.46	+1.3
2,619,235	-		IAI47_12405	0.46	+0.9
2,619,235	-		IAI47_12405	0.46	-0.4
2,619,235	-		IAI47_12405	0.46	+2.9
2,619,235	-		IAI47_12405	0.46	-0.3
2,619,302	+		IAI47_12405	0.50	-0.9
2,619,303	-		IAI47_12405	0.50	+0.3
2,619,303	-		IAI47_12405	0.50	+0.5
2,619,315	-		IAI47_12405	0.50	+0.8
2,619,332	+		IAI47_12405	0.51	+1.3
2,619,332	+		IAI47_12405	0.51	+0.4
2,619,332	+		IAI47_12405	0.51	-1.0
2,619,332	+		IAI47_12405	0.51	+0.3
2,619,333	-		IAI47_12405	0.51	-0.8
2,619,333	-		IAI47_12405	0.51	-3.3
2,619,371	+		IAI47_12405	0.54	-2.3
2,619,372	-		IAI47_12405	0.54	-0.5
2,619,372	-		IAI47_12405	0.54	+0.4
2,619,498	-		IAI47_12405	0.61	-0.7
2,619,574	+		IAI47_12405	0.66	-0.1
2,619,574	+		IAI47_12405	0.66	-1.0
2,619,574	+		IAI47_12405	0.66	+0.5
2,619,574	+		IAI47_12405	0.66	-0.0
2,619,575	-		IAI47_12405	0.66	+0.7
2,619,575	-		IAI47_12405	0.66	-0.0
2,619,575	-		IAI47_12405	0.66	+0.5
2,619,618	+		IAI47_12405	0.68	-0.9
2,619,619	-		IAI47_12405	0.68	+3.0
2,619,635	+		IAI47_12405	0.69	-0.1
2,619,709	+		IAI47_12405	0.74	-0.0
2,619,709	+		IAI47_12405	0.74	-1.6
2,619,709	+		IAI47_12405	0.74	-1.8
2,619,710	-		IAI47_12405	0.74	+0.5
2,619,712	+		IAI47_12405	0.74	+0.1
2,619,712	+		IAI47_12405	0.74	-0.9
2,619,712	+		IAI47_12405	0.74	+0.3
2,619,713	-		IAI47_12405	0.74	+0.8
2,619,713	-		IAI47_12405	0.74	+0.4
2,619,713	-		IAI47_12405	0.74	-0.8
2,619,713	-		IAI47_12405	0.74	-0.0
2,619,713	-		IAI47_12405	0.74	+0.1
2,619,713	-		IAI47_12405	0.74	+2.7
2,619,713	-		IAI47_12405	0.74	-0.8
2,619,795	+		IAI47_12405	0.79	-0.5
2,619,795	+		IAI47_12405	0.79	-0.1
2,619,796	-		IAI47_12405	0.79	+0.4
2,619,816	+		IAI47_12405	0.80	-0.4
2,619,816	+		IAI47_12405	0.80	+0.2
2,619,816	+		IAI47_12405	0.80	-1.4
2,619,816	+		IAI47_12405	0.80	-0.3
2,619,816	+		IAI47_12405	0.80	+0.5
2,619,816	+		IAI47_12405	0.80	-1.7
2,619,817	-		IAI47_12405	0.80	-0.0
2,619,817	-		IAI47_12405	0.80	+0.2
2,619,817	-		IAI47_12405	0.80	-0.3
2,619,817	-		IAI47_12405	0.80	+2.8
2,619,817	-		IAI47_12405	0.80	+1.1
2,619,817	-		IAI47_12405	0.80	+1.1
2,619,820	+		IAI47_12405	0.80	+1.2
2,619,820	+		IAI47_12405	0.80	+0.0
2,619,820	+		IAI47_12405	0.80	-2.2
2,619,820	+		IAI47_12405	0.80	-0.8
2,619,820	+		IAI47_12405	0.80	+0.2
2,619,820	+		IAI47_12405	0.80	+1.5
2,619,820	+		IAI47_12405	0.80	-1.5
2,619,821	-		IAI47_12405	0.80	-0.2
2,619,821	-		IAI47_12405	0.80	-1.3
2,619,843	-		IAI47_12405	0.82	-1.3
2,619,891	+		IAI47_12405	0.85	-0.2
2,619,891	+		IAI47_12405	0.85	+1.0
2,619,891	+		IAI47_12405	0.85	-1.6
2,619,891	+		IAI47_12405	0.85	-0.9
2,619,892	-		IAI47_12405	0.85	-0.5
2,619,892	-		IAI47_12405	0.85	+0.7
2,619,892	-		IAI47_12405	0.85	+0.2
2,619,892	-		IAI47_12405	0.85	-0.8
2,619,893	+		IAI47_12405	0.85	-1.3
2,619,894	-		IAI47_12405	0.85	+0.5
2,619,894	-		IAI47_12405	0.85	+1.3
2,619,913	+		IAI47_12405	0.86	+1.3
2,619,913	+		IAI47_12405	0.86	-0.5
2,619,913	+		IAI47_12405	0.86	+2.1
2,619,914	-		IAI47_12405	0.86	+0.7
2,619,914	-		IAI47_12405	0.86	+0.5
2,620,133	-				-1.1
2,620,133	-				-1.0
2,620,155	+				+0.1
2,620,155	+				-1.4
2,620,155	+				+1.5
2,620,155	+				-0.7
2,620,156	-				-0.1
2,620,156	-				+0.5
2,620,156	-				+0.5
2,620,156	-				+0.8
2,620,156	-				+0.3
2,620,156	-				+0.8
2,620,156	-				+1.0
2,620,156	-				-1.8
2,620,156	-				-0.3
2,620,156	-				+0.7
2,620,156	-				-0.0
2,620,156	-				+1.8
2,620,156	-				-0.3
2,620,156	-				-1.0
2,620,225	+		IAI47_12410	0.16	-2.5
2,620,225	+		IAI47_12410	0.16	-1.6
2,620,226	-		IAI47_12410	0.17	+1.0
2,620,226	-		IAI47_12410	0.17	-0.1
2,620,243	+		IAI47_12410	0.21	+0.5
2,620,340	+		IAI47_12410	0.43	-2.2
2,620,340	+		IAI47_12410	0.43	-2.7
2,620,390	+		IAI47_12410	0.55	-0.5
2,620,390	+		IAI47_12410	0.55	-0.9
2,620,391	-		IAI47_12410	0.55	-0.7
2,620,391	-		IAI47_12410	0.55	-0.6
2,620,391	-		IAI47_12410	0.55	-0.3
2,620,490	+		IAI47_12410	0.78	-2.6
2,620,490	+		IAI47_12410	0.78	-0.8
2,620,490	+		IAI47_12410	0.78	-0.5
2,620,491	-		IAI47_12410	0.78	-0.9
2,620,491	-		IAI47_12410	0.78	-0.9
2,620,491	-		IAI47_12410	0.78	-1.7
2,620,499	-		IAI47_12410	0.80	-2.5
2,620,504	+		IAI47_12410	0.81	-2.3
2,620,504	+		IAI47_12410	0.81	+0.3
2,620,505	-		IAI47_12410	0.81	+0.5
2,620,505	-		IAI47_12410	0.81	-1.1
2,620,553	+				-1.6
2,620,554	-				-0.7
2,620,554	-				-1.5
2,620,554	-				-0.6
2,620,554	-				+1.5
2,620,567	+				+0.5
2,620,567	+				+0.2
2,620,567	+				-1.2
2,620,568	-				-0.5
2,620,573	+				-2.3
2,620,573	+				-2.0
2,620,573	+				-2.1
2,620,574	-				+0.7
2,620,574	-				-1.0
2,620,630	+				-0.1
2,620,630	+				-2.4
2,620,630	+				-0.3
2,620,630	+				-0.5
2,620,631	-				+0.2
2,620,633	+				-0.6
2,620,636	-				+0.2
2,620,636	-				+0.3
2,620,728	-				+1.9
2,620,845	+		IAI47_12415	0.15	-1.0
2,620,845	+		IAI47_12415	0.15	+1.4
2,620,845	+		IAI47_12415	0.15	+0.5
2,620,845	+		IAI47_12415	0.15	+0.9
2,620,845	+		IAI47_12415	0.15	-0.1
2,620,846	-		IAI47_12415	0.15	+0.7
2,620,846	-		IAI47_12415	0.15	+0.5
2,620,846	-		IAI47_12415	0.15	-1.0
2,620,846	-		IAI47_12415	0.15	+1.0
2,620,846	-		IAI47_12415	0.15	+0.9
2,620,846	-		IAI47_12415	0.15	-0.7
2,620,846	-		IAI47_12415	0.15	-0.7
2,620,850	+		IAI47_12415	0.16	-0.4
2,620,850	+		IAI47_12415	0.16	+2.5
2,620,850	+		IAI47_12415	0.16	-0.3
2,620,850	+		IAI47_12415	0.16	+1.5
2,620,850	+		IAI47_12415	0.16	-0.8
2,620,851	-		IAI47_12415	0.16	+0.7
2,620,851	-		IAI47_12415	0.16	-0.5
2,620,851	-		IAI47_12415	0.16	+0.2
2,620,851	-		IAI47_12415	0.16	+2.2
2,620,851	-		IAI47_12415	0.16	-0.9
2,620,851	-		IAI47_12415	0.16	+1.5
2,620,851	-		IAI47_12415	0.16	-0.5
2,620,851	-		IAI47_12415	0.16	+0.1
2,620,873	+		IAI47_12415	0.19	-0.3
2,620,873	+		IAI47_12415	0.19	-0.4
2,620,874	-		IAI47_12415	0.19	-1.4
2,620,874	-		IAI47_12415	0.19	+1.3
2,620,928	+		IAI47_12415	0.26	-2.3
2,620,928	+		IAI47_12415	0.26	-0.0
2,620,929	-		IAI47_12415	0.26	-0.1
2,620,964	+		IAI47_12415	0.31	-1.0
2,620,964	+		IAI47_12415	0.31	-0.2
2,620,964	+		IAI47_12415	0.31	+0.9
2,620,986	+		IAI47_12415	0.34	-0.2
2,620,986	+		IAI47_12415	0.34	+0.4
2,620,987	-		IAI47_12415	0.34	+0.6
2,620,987	-		IAI47_12415	0.34	-0.8
2,620,991	+		IAI47_12415	0.34	+0.6
2,620,991	+		IAI47_12415	0.34	+1.0
2,620,991	+		IAI47_12415	0.34	-0.3
2,620,991	+		IAI47_12415	0.34	-1.3
2,620,991	+		IAI47_12415	0.34	-0.7
2,620,991	+		IAI47_12415	0.34	+0.0
2,620,991	+		IAI47_12415	0.34	+0.3
2,620,991	+		IAI47_12415	0.34	+1.8
2,620,992	-		IAI47_12415	0.35	-0.4
2,620,992	-		IAI47_12415	0.35	-0.2
2,620,992	-		IAI47_12415	0.35	-1.2
2,620,992	-		IAI47_12415	0.35	+0.3
2,620,992	-		IAI47_12415	0.35	-0.3
2,620,992	-		IAI47_12415	0.35	-2.4
2,620,992	-		IAI47_12415	0.35	-0.5
2,620,992	-		IAI47_12415	0.35	+3.0
2,620,992	-		IAI47_12415	0.35	+1.1
2,620,992	-		IAI47_12415	0.35	+0.5
2,620,992	-		IAI47_12415	0.35	-1.6
2,620,992	-		IAI47_12415	0.35	-0.5
2,620,998	+		IAI47_12415	0.35	-0.3
2,620,998	+		IAI47_12415	0.35	-0.5
2,620,999	-		IAI47_12415	0.35	-0.2
2,620,999	-		IAI47_12415	0.35	-1.0
2,621,030	+		IAI47_12415	0.40	-0.0
2,621,030	+		IAI47_12415	0.40	+0.7
2,621,030	+		IAI47_12415	0.40	+2.0
2,621,031	-		IAI47_12415	0.40	+0.3
2,621,037	-		IAI47_12415	0.41	-0.2
2,621,109	+		IAI47_12415	0.50	-2.5
2,621,109	+		IAI47_12415	0.50	+0.0
2,621,109	+		IAI47_12415	0.50	+0.9
2,621,110	-		IAI47_12415	0.50	-1.7
2,621,110	-		IAI47_12415	0.50	-0.3
2,621,110	-		IAI47_12415	0.50	+0.4
2,621,110	-		IAI47_12415	0.50	+0.3
2,621,110	-		IAI47_12415	0.50	+1.2
2,621,110	-		IAI47_12415	0.50	-0.3
2,621,142	+		IAI47_12415	0.54	-0.7
2,621,142	+		IAI47_12415	0.54	+0.1
2,621,142	+		IAI47_12415	0.54	+0.8
2,621,142	+		IAI47_12415	0.54	-0.4
2,621,142	+		IAI47_12415	0.54	+0.2
2,621,143	-		IAI47_12415	0.55	+0.0
2,621,143	-		IAI47_12415	0.55	+1.6
2,621,143	-		IAI47_12415	0.55	+1.3
2,621,241	-		IAI47_12415	0.68	-0.7
2,621,241	-		IAI47_12415	0.68	-0.3
2,621,349	+		IAI47_12415	0.82	+1.1
2,621,452	+				-1.0
2,621,452	+				+0.4
2,621,452	+				+2.5
2,621,453	-				+1.1
2,621,453	-				-1.0
2,621,464	+				+0.5
2,621,483	+				+1.4
2,621,483	+				+0.3
2,621,483	+				+0.9
2,621,553	+				+1.1
2,621,553	+				-0.2
2,621,555	+				-0.8
2,621,555	+				-0.6
2,621,556	-				+1.4
2,621,556	-				-1.9
2,621,556	-				+0.7
2,621,560	+				+0.4
2,621,567	-				+0.2
2,621,585	+				+1.0