Strain Fitness in Pantoea sp. MT58 around IAI47_11205

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
2,367,695	+		IAI47_11200	0.29	-2.9
2,367,695	+		IAI47_11200	0.29	-1.3
2,367,695	+		IAI47_11200	0.29	-1.2
2,367,764	+		IAI47_11200	0.35	-2.3
2,367,764	+		IAI47_11200	0.35	-0.0
2,367,893	+		IAI47_11200	0.45	+1.3
2,367,894	-		IAI47_11200	0.45	-0.2
2,368,042	+		IAI47_11200	0.57	-2.9
2,368,042	+		IAI47_11200	0.57	+0.4
2,368,042	+		IAI47_11200	0.57	-2.5
2,368,042	+		IAI47_11200	0.57	+0.3
2,368,042	+		IAI47_11200	0.57	+1.5
2,368,043	-		IAI47_11200	0.57	-0.5
2,368,218	+		IAI47_11200	0.72	-2.9
2,368,219	-		IAI47_11200	0.72	-1.0
2,368,330	-		IAI47_11200	0.81	-2.0
2,368,330	-		IAI47_11200	0.81	-0.5
2,368,464	+				-1.5
2,368,465	-				-1.2
2,368,509	+				-1.2
2,368,540	-				-1.4
2,368,540	-				+1.0
2,368,558	+				-1.2
2,368,558	+				-2.0
2,368,558	+				+2.0
2,368,559	-				-1.3
2,368,559	-				-0.2
2,368,610	+				-0.3
2,368,611	-				-3.3
2,368,714	+				-3.0
2,368,789	+		IAI47_11205	0.11	-1.7
2,368,845	+		IAI47_11205	0.13	+0.5
2,368,927	+		IAI47_11205	0.17	-0.0
2,368,928	-		IAI47_11205	0.17	-1.2
2,368,950	+		IAI47_11205	0.18	-3.9
2,368,951	-		IAI47_11205	0.18	-1.2
2,368,951	-		IAI47_11205	0.18	-3.0
2,368,951	-		IAI47_11205	0.18	+0.3
2,368,971	+		IAI47_11205	0.19	-1.3
2,368,971	+		IAI47_11205	0.19	-0.5
2,368,972	-		IAI47_11205	0.19	+0.5
2,368,972	-		IAI47_11205	0.19	-0.8
2,369,145	+		IAI47_11205	0.28	-2.5
2,369,145	+		IAI47_11205	0.28	-1.9
2,369,145	+		IAI47_11205	0.28	+0.5
2,369,199	-		IAI47_11205	0.30	-2.9
2,369,199	-		IAI47_11205	0.30	-1.9
2,369,370	+		IAI47_11205	0.38	-3.0
2,369,384	+		IAI47_11205	0.39	+1.5
2,369,384	+		IAI47_11205	0.39	-2.9
2,369,408	+		IAI47_11205	0.40	-1.3
2,369,408	+		IAI47_11205	0.40	-2.0
2,369,409	-		IAI47_11205	0.40	-1.7
2,369,415	+		IAI47_11205	0.40	-2.4
2,369,415	+		IAI47_11205	0.40	-0.0
2,369,415	+		IAI47_11205	0.40	-1.5
2,369,416	-		IAI47_11205	0.40	+4.7
2,369,426	+		IAI47_11205	0.41	-1.3
2,369,426	+		IAI47_11205	0.41	-1.3
2,369,427	-		IAI47_11205	0.41	-2.3
2,369,433	-		IAI47_11205	0.41	+2.2
2,369,451	-		IAI47_11205	0.42	+2.1
2,369,469	-		IAI47_11205	0.43	-2.9
2,369,791	+		IAI47_11205	0.58	+1.5
2,369,880	-		IAI47_11205	0.62	-2.4
2,369,933	+		IAI47_11205	0.65	+0.1
2,369,934	-		IAI47_11205	0.65	-1.6
2,369,955	-		IAI47_11205	0.66	-1.5
2,370,033	+		IAI47_11205	0.70	-1.4
2,370,034	-		IAI47_11205	0.70	+0.1
2,370,036	+		IAI47_11205	0.70	-0.3
2,370,051	+		IAI47_11205	0.70	-0.7
2,370,051	+		IAI47_11205	0.70	-0.8
2,370,128	+		IAI47_11205	0.74	-2.3
2,370,129	-		IAI47_11205	0.74	-0.3
2,370,142	+		IAI47_11205	0.75	-0.8
2,370,169	+		IAI47_11205	0.76	+1.9
2,370,169	+		IAI47_11205	0.76	-2.0
2,370,226	+		IAI47_11205	0.79	-2.0
2,370,226	+		IAI47_11205	0.79	-1.7
2,370,226	+		IAI47_11205	0.79	-3.5
2,370,227	-		IAI47_11205	0.79	-0.3
2,370,228	+		IAI47_11205	0.79	-1.1
2,370,228	+		IAI47_11205	0.79	-2.0
2,370,267	+		IAI47_11205	0.81	-0.8
2,370,281	+		IAI47_11205	0.81	-2.6
2,370,281	+		IAI47_11205	0.81	+0.1
2,370,281	+		IAI47_11205	0.81	-1.5
2,370,282	-		IAI47_11205	0.81	-1.8
2,370,282	-		IAI47_11205	0.81	-2.4
2,370,282	-		IAI47_11205	0.81	-3.7
2,370,320	+		IAI47_11205	0.83	-2.3
2,370,320	+		IAI47_11205	0.83	+1.0
2,370,320	+		IAI47_11205	0.83	-1.3
2,370,320	+		IAI47_11205	0.83	-0.5
2,370,320	+		IAI47_11205	0.83	-0.1
2,370,381	+		IAI47_11205	0.86	-1.2
2,370,394	-		IAI47_11205	0.87	+3.3
2,370,409	-		IAI47_11205	0.87	-2.5
2,370,472	+				-1.9
2,370,473	-				+1.3
2,370,546	+				-1.0
2,370,546	+				-1.3
2,370,547	-				+0.3
2,370,547	-				+1.5
2,370,547	-				+1.7
2,370,557	+				-0.5
2,370,558	-				+0.5
2,370,565	+				-1.4
2,370,565	+				+1.1
2,370,565	+				-2.4
2,370,565	+				-1.0
2,370,566	-				-0.6
2,370,566	-				+0.0
2,370,566	-				+0.3
2,370,575	+				-1.1
2,370,576	-				-0.8
2,370,629	+				-0.7
2,370,672	+				+0.6
2,370,672	+				+0.8
2,370,673	-				+1.0
2,370,687	+				+2.1
2,370,687	+				+1.4
2,370,687	+				+0.9
2,370,687	+				+2.1
2,370,687	+				-0.1
2,370,688	-				+0.8
2,370,688	-				+0.2
2,370,688	-				+0.4
2,370,697	+				+0.8
2,370,697	+				+1.7
2,370,697	+				+1.3
2,370,697	+				+1.6
2,370,698	-				-0.1
2,370,698	-				+2.8
2,370,698	-				-0.6
2,370,698	-				+2.2
2,370,698	-				-0.4
2,370,715	+				+0.3
2,370,715	+				-0.1
2,370,716	-				+0.8
2,370,774	+		IAI47_11210	0.12	-0.1
2,370,774	+		IAI47_11210	0.12	+1.4
2,370,774	+		IAI47_11210	0.12	+2.1
2,370,775	-		IAI47_11210	0.12	+0.5
2,370,775	-		IAI47_11210	0.12	+0.7
2,370,775	-		IAI47_11210	0.12	+1.5
2,370,775	-		IAI47_11210	0.12	-0.3
2,370,838	-		IAI47_11210	0.21	+1.2
2,370,905	+		IAI47_11210	0.31	+1.1
2,370,905	+		IAI47_11210	0.31	+0.8
2,370,905	+		IAI47_11210	0.31	+1.4
2,370,906	-		IAI47_11210	0.31	+0.5
2,370,906	-		IAI47_11210	0.31	+2.0
2,370,906	-		IAI47_11210	0.31	+3.3
2,370,906	-		IAI47_11210	0.31	-0.8
2,370,906	-		IAI47_11210	0.31	+1.7
2,370,906	-		IAI47_11210	0.31	+0.7
2,370,920	+		IAI47_11210	0.33	+2.8
2,370,921	-		IAI47_11210	0.33	+0.1
2,371,052	+		IAI47_11210	0.52	-1.0
2,371,052	+		IAI47_11210	0.52	+0.5
2,371,052	+		IAI47_11210	0.52	+2.4
2,371,052	+		IAI47_11210	0.52	+3.2
2,371,053	-		IAI47_11210	0.52	+0.6
2,371,088	+		IAI47_11210	0.57	+1.7
2,371,088	+		IAI47_11210	0.57	+1.3
2,371,089	-		IAI47_11210	0.57	+0.9
2,371,149	+		IAI47_11210	0.66	-0.0
2,371,149	+		IAI47_11210	0.66	+0.3
2,371,150	-		IAI47_11210	0.66	+0.4
2,371,150	-		IAI47_11210	0.66	-0.3
2,371,237	+		IAI47_11210	0.79	+0.9
2,371,237	+		IAI47_11210	0.79	+2.5
2,371,237	+		IAI47_11210	0.79	-0.4
2,371,237	+		IAI47_11210	0.79	+0.2
2,371,238	-		IAI47_11210	0.79	+1.6
2,371,238	-		IAI47_11210	0.79	+1.0
2,371,238	-		IAI47_11210	0.79	+0.7
2,371,238	-		IAI47_11210	0.79	+0.9
2,371,238	-		IAI47_11210	0.79	+0.5
2,371,248	+		IAI47_11210	0.80	+1.5
2,371,248	+		IAI47_11210	0.80	+1.3
2,371,249	-		IAI47_11210	0.80	+0.7
2,371,249	-		IAI47_11210	0.80	+0.6
2,371,249	-		IAI47_11210	0.80	+0.7
2,371,254	+		IAI47_11210	0.81	+2.5
2,371,254	+		IAI47_11210	0.81	+1.2
2,371,254	+		IAI47_11210	0.81	+2.0
2,371,254	+		IAI47_11210	0.81	+1.4
2,371,254	+		IAI47_11210	0.81	-0.1
2,371,255	-		IAI47_11210	0.81	-0.9
2,371,320	-				+0.4
2,371,356	+				+1.5
2,371,356	+				+1.2
2,371,356	+				+1.1
2,371,356	+				+0.6
2,371,357	-				-0.2
2,371,357	-				+2.2
2,371,357	-				+0.4
2,371,357	-				-0.7
2,371,366	+				+1.6
2,371,367	-				+0.0
2,371,417	+				+0.6
2,371,418	-				-0.4
2,371,549	-		IAI47_11215	0.11	-1.8
2,371,628	+		IAI47_11215	0.18	-0.7
2,371,635	+		IAI47_11215	0.19	-0.6
2,371,635	+		IAI47_11215	0.19	+0.0
2,371,635	+		IAI47_11215	0.19	+0.7
2,371,636	-		IAI47_11215	0.19	+0.5
2,371,636	-		IAI47_11215	0.19	+0.1
2,371,636	-		IAI47_11215	0.19	+2.2