Strain Fitness in Pantoea sp. MT58 around IAI47_04775

Experiment: TNT (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TNT (N)
1,003,251	-		IAI47_04770	0.50	+1.0
1,003,309	+		IAI47_04770	0.53	+0.2
1,003,310	-		IAI47_04770	0.53	+3.9
1,003,323	+		IAI47_04770	0.54	-0.3
1,003,654	+		IAI47_04770	0.72	-1.5
1,003,686	-		IAI47_04770	0.74	+1.4
1,003,810	-		IAI47_04770	0.81	+0.3
1,003,841	-		IAI47_04770	0.83	-0.7
1,003,852	-		IAI47_04770	0.84	-0.7
1,003,877	+		IAI47_04770	0.85	-1.6
1,003,880	+		IAI47_04770	0.85	-0.3
1,003,880	+		IAI47_04770	0.85	+2.7
1,003,920	-		IAI47_04770	0.87	+0.2
1,003,967	+				+0.6
1,003,980	-				-0.5
1,003,980	-				-1.3
1,003,982	-				-0.3
1,004,020	+				-0.1
1,004,020	+				-0.2
1,004,020	+				+0.8
1,004,024	+				+0.3
1,004,024	+				+0.8
1,004,025	-				+0.8
1,004,025	-				+0.2
1,004,027	-				-0.3
1,004,041	+				+1.9
1,004,042	-				+0.4
1,004,042	-				-1.1
1,004,042	-				-1.2
1,004,042	-				+0.0
1,004,055	+				-1.7
1,004,056	-				+0.3
1,004,067	+				-0.2
1,004,067	+				-1.1
1,004,068	-				-1.1
1,004,068	-				-1.6
1,004,068	-				+0.1
1,004,068	-				-1.3
1,004,108	+				+0.4
1,004,109	-				+0.9
1,004,109	-				-0.6
1,004,116	+				-3.4
1,004,121	+				-1.2
1,004,122	-				-0.1
1,004,179	-				-0.3
1,004,205	+				-1.3
1,004,226	-				+1.4
1,004,230	-				+0.4
1,004,277	+		IAI47_04775	0.13	+2.5
1,004,609	-		IAI47_04775	0.43	-0.5
1,004,895	-		IAI47_04775	0.68	-1.0
1,004,901	+		IAI47_04775	0.69	+0.5
1,004,902	-		IAI47_04775	0.69	-0.5
1,005,131	+		IAI47_04775	0.89	-2.1
1,005,155	-				-1.9
1,005,159	+				-3.5
1,005,163	+				-0.5
1,005,164	-				-0.6
1,005,164	-				-1.6
1,005,168	-				+0.4
1,005,168	-				-1.0
1,005,168	-				+0.8
1,005,168	-				+0.6
1,005,220	-				-0.1
1,005,253	+				+0.8
1,005,253	+				-2.1
1,005,258	+				+1.5
1,005,272	+				+0.3
1,005,273	-				+0.9
1,005,273	-				-0.5
1,005,300	+				-0.6
1,005,335	+				-0.8
1,005,337	+				-0.3
1,005,360	-				+0.3
1,005,373	-		IAI47_04780	0.10	+0.5
1,005,384	+		IAI47_04780	0.11	+0.2
1,005,388	-		IAI47_04780	0.11	+0.2
1,005,388	-		IAI47_04780	0.11	+0.4
1,005,438	+		IAI47_04780	0.15	+1.3
1,005,439	-		IAI47_04780	0.16	-0.7
1,005,451	-		IAI47_04780	0.17	-1.8
1,005,458	+		IAI47_04780	0.17	+0.9
1,005,473	+		IAI47_04780	0.18	+0.3
1,005,473	+		IAI47_04780	0.18	+0.9
1,005,474	-		IAI47_04780	0.18	-0.3
1,005,480	+		IAI47_04780	0.19	-0.1
1,005,491	+		IAI47_04780	0.20	-1.6
1,005,491	+		IAI47_04780	0.20	+0.3
1,005,491	+		IAI47_04780	0.20	-0.3
1,005,492	-		IAI47_04780	0.20	-2.8
1,005,492	-		IAI47_04780	0.20	+0.4
1,005,509	+		IAI47_04780	0.21	+0.2
1,005,509	+		IAI47_04780	0.21	-1.5
1,005,509	+		IAI47_04780	0.21	-1.5
1,005,510	-		IAI47_04780	0.21	-1.4
1,005,510	-		IAI47_04780	0.21	+0.3
1,005,542	+		IAI47_04780	0.24	-0.6
1,005,543	-		IAI47_04780	0.24	+0.2
1,005,543	-		IAI47_04780	0.24	+0.5
1,005,563	+		IAI47_04780	0.26	+0.5
1,005,563	+		IAI47_04780	0.26	+0.4
1,005,563	+		IAI47_04780	0.26	-0.5
1,005,564	-		IAI47_04780	0.26	-0.7
1,005,564	-		IAI47_04780	0.26	-1.0
1,005,564	-		IAI47_04780	0.26	-0.7
1,005,564	-		IAI47_04780	0.26	-0.0
1,005,564	-		IAI47_04780	0.26	+0.4
1,005,564	-		IAI47_04780	0.26	+0.5
1,005,603	+		IAI47_04780	0.29	-0.8
1,005,603	+		IAI47_04780	0.29	-1.1
1,005,609	+		IAI47_04780	0.30	+0.5
1,005,609	+		IAI47_04780	0.30	-0.5
1,005,609	+		IAI47_04780	0.30	+2.3
1,005,609	+		IAI47_04780	0.30	+0.4
1,005,609	+		IAI47_04780	0.30	+0.4
1,005,610	-		IAI47_04780	0.30	-1.5
1,005,610	-		IAI47_04780	0.30	+0.5
1,005,715	-		IAI47_04780	0.38	-0.8
1,005,715	-		IAI47_04780	0.38	+0.9
1,005,740	+		IAI47_04780	0.41	-0.8
1,005,740	+		IAI47_04780	0.41	+0.0
1,005,741	-		IAI47_04780	0.41	-1.3
1,005,775	-		IAI47_04780	0.43	+0.0
1,005,789	+		IAI47_04780	0.45	+1.5
1,005,789	+		IAI47_04780	0.45	+1.1
1,005,789	+		IAI47_04780	0.45	+0.5
1,005,789	+		IAI47_04780	0.45	-0.6
1,005,790	-		IAI47_04780	0.45	+1.6
1,005,790	-		IAI47_04780	0.45	+0.3
1,005,790	-		IAI47_04780	0.45	+0.2
1,005,876	-		IAI47_04780	0.52	+0.5
1,005,904	+		IAI47_04780	0.54	-0.6
1,005,904	+		IAI47_04780	0.54	-0.8
1,005,905	-		IAI47_04780	0.54	+0.0
1,005,923	+		IAI47_04780	0.56	-0.1
1,005,969	+		IAI47_04780	0.60	+0.2
1,006,043	+		IAI47_04780	0.66	-0.2
1,006,043	+		IAI47_04780	0.66	-0.9
1,006,043	+		IAI47_04780	0.66	-1.1
1,006,043	+		IAI47_04780	0.66	-0.6
1,006,043	+		IAI47_04780	0.66	-0.2
1,006,044	-		IAI47_04780	0.66	-1.6
1,006,044	-		IAI47_04780	0.66	-0.9
1,006,044	-		IAI47_04780	0.66	+0.7
1,006,044	-		IAI47_04780	0.66	-1.1
1,006,044	-		IAI47_04780	0.66	+2.3
1,006,067	+		IAI47_04780	0.68	-0.6
1,006,067	+		IAI47_04780	0.68	+0.3
1,006,068	-		IAI47_04780	0.68	+0.1
1,006,078	+		IAI47_04780	0.69	+0.3
1,006,079	-		IAI47_04780	0.69	-0.4
1,006,079	-		IAI47_04780	0.69	+0.2
1,006,103	+		IAI47_04780	0.71	+0.2
1,006,103	+		IAI47_04780	0.71	-1.1
1,006,104	-		IAI47_04780	0.71	-0.0
1,006,104	-		IAI47_04780	0.71	-0.4
1,006,104	-		IAI47_04780	0.71	-0.0
1,006,104	-		IAI47_04780	0.71	+1.5
1,006,142	+		IAI47_04780	0.74	-0.7
1,006,143	-		IAI47_04780	0.74	-0.8
1,006,170	+		IAI47_04780	0.76	+0.2
1,006,170	+		IAI47_04780	0.76	+1.5
1,006,170	+		IAI47_04780	0.76	-0.3
1,006,170	+		IAI47_04780	0.76	-0.1
1,006,170	+		IAI47_04780	0.76	-0.1
1,006,170	+		IAI47_04780	0.76	-0.4
1,006,170	+		IAI47_04780	0.76	-0.7
1,006,170	+		IAI47_04780	0.76	+0.1
1,006,170	+		IAI47_04780	0.76	+0.4
1,006,170	+		IAI47_04780	0.76	+2.3
1,006,171	-		IAI47_04780	0.76	+1.9
1,006,213	-		IAI47_04780	0.80	-0.1
1,006,213	-		IAI47_04780	0.80	+0.2
1,006,222	+		IAI47_04780	0.81	+0.7
1,006,222	+		IAI47_04780	0.81	+0.1
1,006,223	-		IAI47_04780	0.81	-0.7
1,006,223	-		IAI47_04780	0.81	+2.1
1,006,223	-		IAI47_04780	0.81	-0.8
1,006,223	-		IAI47_04780	0.81	-0.4
1,006,246	-		IAI47_04780	0.83	+1.9