Strain Fitness in Pantoea sp. MT58 around IAI47_21805

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
106,193	+				+2.3
106,206	-				+0.7
106,290	+				-1.0
106,298	+				+1.8
106,298	+				+0.5
106,298	+				+0.7
106,299	-				-1.5
106,299	-				-3.0
106,320	-				-0.0
106,326	+				-1.8
106,326	+				-2.6
106,326	+				+1.4
106,326	+				-0.2
106,326	+				-1.2
106,327	-				-1.5
106,335	+				+1.0
106,335	+				-2.5
106,336	-				-1.7
106,390	+				-1.9
106,391	-				-0.7
106,391	-				-2.4
106,432	+		IAI47_21800	0.15	-2.8
106,433	-		IAI47_21800	0.16	+1.1
106,530	+		IAI47_21800	0.33	+3.7
106,531	-		IAI47_21800	0.33	+2.8
106,531	-		IAI47_21800	0.33	+1.3
106,531	-		IAI47_21800	0.33	-1.6
106,555	+		IAI47_21800	0.37	+0.9
106,556	-		IAI47_21800	0.37	-2.2
106,556	-		IAI47_21800	0.37	-3.0
106,556	-		IAI47_21800	0.37	+3.3
106,556	-		IAI47_21800	0.37	-2.0
106,556	-		IAI47_21800	0.37	+3.2
106,568	+		IAI47_21800	0.39	+0.7
106,568	+		IAI47_21800	0.39	-4.0
106,568	+		IAI47_21800	0.39	-2.0
106,569	-		IAI47_21800	0.39	-0.1
106,569	-		IAI47_21800	0.39	-0.0
106,569	-		IAI47_21800	0.39	+1.7
106,569	-		IAI47_21800	0.39	-2.9
106,569	-		IAI47_21800	0.39	+1.3
106,569	-		IAI47_21800	0.39	-0.6
106,579	-		IAI47_21800	0.41	-0.3
106,621	+		IAI47_21800	0.49	+2.1
106,621	+		IAI47_21800	0.49	+0.2
106,621	+		IAI47_21800	0.49	+0.3
106,621	+		IAI47_21800	0.49	+1.4
106,621	+		IAI47_21800	0.49	+0.7
106,621	+		IAI47_21800	0.49	-0.6
106,622	-		IAI47_21800	0.49	+0.2
106,672	+		IAI47_21800	0.58	-1.5
106,672	+		IAI47_21800	0.58	+1.5
106,673	-		IAI47_21800	0.58	-0.7
106,673	-		IAI47_21800	0.58	+1.3
106,686	-		IAI47_21800	0.60	-1.7
106,736	+		IAI47_21800	0.69	-3.6
106,737	-		IAI47_21800	0.69	-3.5
106,811	+		IAI47_21800	0.82	-2.5
106,811	+		IAI47_21800	0.82	-0.7
106,811	+		IAI47_21800	0.82	+1.9
106,811	+		IAI47_21800	0.82	-2.0
106,812	-		IAI47_21800	0.82	-0.1
106,812	-		IAI47_21800	0.82	+0.3
106,815	+		IAI47_21800	0.83	+1.1
106,815	+		IAI47_21800	0.83	+0.6
106,815	+		IAI47_21800	0.83	+1.3
106,815	+		IAI47_21800	0.83	+1.1
106,815	+		IAI47_21800	0.83	-2.5
106,815	+		IAI47_21800	0.83	+2.5
106,816	-		IAI47_21800	0.83	+3.9
106,816	-		IAI47_21800	0.83	+0.6
106,816	-		IAI47_21800	0.83	-0.2
106,816	-		IAI47_21800	0.83	-2.4
106,820	+		IAI47_21800	0.84	+3.3
106,820	+		IAI47_21800	0.84	+2.9
106,918	+				+1.6
106,918	+				-0.2
106,919	-				-1.2
106,921	+				+1.9
106,921	+				-2.2
106,922	-				-0.2
106,922	-				+0.3
106,922	-				-0.2
106,922	-				-0.4
106,956	-				+1.3
106,963	+				-2.8
106,964	-				+1.6
106,964	-				-0.6
107,064	-				-1.0
107,132	+				+0.2
107,133	-				-1.0
107,133	-				+1.1
107,133	-				+0.6
107,133	-				-2.9
107,133	-				+1.5
107,174	+				-1.0
107,174	+				-2.2
107,174	+				+4.8
107,175	-				+0.9
107,175	-				-2.0
107,175	-				+1.0
107,175	-				+1.5
107,175	-				-1.6
107,175	-				+0.7
107,175	-				+1.3
107,175	-				-3.5
107,175	-				-0.3
107,236	-		IAI47_21805	0.10	-1.5
107,268	+		IAI47_21805	0.16	-0.2
107,268	+		IAI47_21805	0.16	+1.3
107,269	-		IAI47_21805	0.16	+0.3
107,269	-		IAI47_21805	0.16	+0.3
107,269	-		IAI47_21805	0.16	+4.3
107,304	+		IAI47_21805	0.22	-2.0
107,304	+		IAI47_21805	0.22	+1.3
107,304	+		IAI47_21805	0.22	+1.7
107,304	+		IAI47_21805	0.22	+1.1
107,304	+				-0.2
107,304	+		IAI47_21805	0.22	-1.2
107,304	+		IAI47_21805	0.22	-1.2
107,304	+		IAI47_21805	0.22	-0.2
107,305	-		IAI47_21805	0.22	-3.0
107,305	-		IAI47_21805	0.22	+0.3
107,305	-		IAI47_21805	0.22	+0.8
107,305	-		IAI47_21805	0.22	+3.0
107,309	+		IAI47_21805	0.23	+0.7
107,309	+		IAI47_21805	0.23	+0.5
107,385	-		IAI47_21805	0.37	+3.3
107,385	-		IAI47_21805	0.37	-1.2
107,385	-		IAI47_21805	0.37	-1.5
107,385	-		IAI47_21805	0.37	+1.3
107,486	+		IAI47_21805	0.54	+0.2
107,487	-		IAI47_21805	0.54	+2.6
107,487	-		IAI47_21805	0.54	+1.7
107,487	-		IAI47_21805	0.54	+1.4
107,517	+		IAI47_21805	0.60	+0.3
107,517	+		IAI47_21805	0.60	+0.3
107,518	-		IAI47_21805	0.60	+0.2
107,518	-		IAI47_21805	0.60	-3.7
107,572	-		IAI47_21805	0.69	+2.7
107,659	+		IAI47_21805	0.85	-0.9
107,660	-		IAI47_21805	0.85	+0.2
107,660	-		IAI47_21805	0.85	-0.2
107,704	+				+1.8
107,704	+				-2.6
107,705	-				-0.0
107,705	-				-0.6
107,705	-				+0.3
107,727	+				+1.5
107,807	+				+0.3
107,807	+				+2.7
107,807	+				-2.0
107,807	+				-1.5
107,849	+				+0.3
107,850	-				+0.1
107,850	-				+1.3
107,922	+				+2.6
107,922	+				+0.2
107,922	+				-0.4
107,922	+				-1.2
107,922	+				+4.5
107,923	-				-0.2
107,923	-				+0.9
107,923	-				+1.3
107,940	+				+1.3
108,019	-		IAI47_21810	0.10	-2.6
108,087	+		IAI47_21810	0.13	+5.2
108,088	-		IAI47_21810	0.13	+2.9
108,097	+		IAI47_21810	0.14	+0.3
108,098	-		IAI47_21810	0.14	+0.6
108,105	+		IAI47_21810	0.14	-2.7
108,105	+		IAI47_21810	0.14	-0.5
108,105	+		IAI47_21810	0.14	-0.6
108,106	-		IAI47_21810	0.14	+1.9
108,106	-		IAI47_21810	0.14	-1.3
108,106	-		IAI47_21810	0.14	+0.9
108,106	-		IAI47_21810	0.14	-3.2
108,108	-		IAI47_21810	0.14	+0.6
108,120	+		IAI47_21810	0.15	-1.5
108,121	-		IAI47_21810	0.15	-1.8
108,135	+		IAI47_21810	0.15	+0.5
108,135	+		IAI47_21810	0.15	-2.6
108,135	+		IAI47_21810	0.15	+0.3
108,135	+		IAI47_21810	0.15	-1.5
108,135	+		IAI47_21810	0.15	+3.2
108,135	+		IAI47_21810	0.15	+1.9
108,135	+		IAI47_21810	0.15	-0.5
108,136	-		IAI47_21810	0.15	+0.9
108,136	-		IAI47_21810	0.15	-2.2
108,136	-		IAI47_21810	0.15	-1.2
108,144	-		IAI47_21810	0.16	-0.7
108,144	-		IAI47_21810	0.16	-3.0
108,144	-		IAI47_21810	0.16	+0.9
108,154	-		IAI47_21810	0.16	+0.3
108,214	+		IAI47_21810	0.19	+1.7
108,214	+		IAI47_21810	0.19	+0.9
108,215	-		IAI47_21810	0.19	+1.8
108,215	-		IAI47_21810	0.19	+3.9
108,215	-		IAI47_21810	0.19	+4.2
108,297	+		IAI47_21810	0.23	-3.0
108,297	+		IAI47_21810	0.23	+1.7
108,297	+		IAI47_21810	0.23	+0.2
108,298	-		IAI47_21810	0.23	+4.5
108,300	+		IAI47_21810	0.23	-3.1
108,301	-		IAI47_21810	0.23	+0.3
108,301	-		IAI47_21810	0.23	+1.9
108,330	+		IAI47_21810	0.25	+0.9
108,330	+		IAI47_21810	0.25	+1.8
108,331	-		IAI47_21810	0.25	-0.9
108,331	-		IAI47_21810	0.25	+1.3
108,331	-		IAI47_21810	0.25	-3.3
108,430	+		IAI47_21810	0.29	+3.5
108,431	-		IAI47_21810	0.29	-1.1
108,444	+		IAI47_21810	0.30	-0.5
108,490	+		IAI47_21810	0.32	+3.3
108,533	+		IAI47_21810	0.34	-3.5
108,545	+		IAI47_21810	0.35	-3.3
108,545	+		IAI47_21810	0.35	-0.6
108,546	-		IAI47_21810	0.35	+0.9
108,548	+		IAI47_21810	0.35	-0.1
108,548	+		IAI47_21810	0.35	+2.6
108,548	+		IAI47_21810	0.35	+1.0
108,548	+		IAI47_21810	0.35	-3.6
108,549	-		IAI47_21810	0.35	+2.3
108,556	-		IAI47_21810	0.35	+2.2
108,636	+		IAI47_21810	0.39	-1.2
108,636	+		IAI47_21810	0.39	+0.7
108,637	-		IAI47_21810	0.39	-1.0
108,637	-		IAI47_21810	0.39	+0.9
108,637	-		IAI47_21810	0.39	+0.2
108,637	-		IAI47_21810	0.39	-0.2
108,637	-		IAI47_21810	0.39	-2.2
108,640	+		IAI47_21810	0.39	-1.5
108,640	+		IAI47_21810	0.39	+3.7
108,641	-		IAI47_21810	0.39	-2.0
108,641	-		IAI47_21810	0.39	-1.2
108,641	-		IAI47_21810	0.39	-0.6
108,641	-		IAI47_21810	0.39	-3.2
108,641	-		IAI47_21810	0.39	+0.6
108,641	-		IAI47_21810	0.39	+1.7
108,641	-		IAI47_21810	0.39	-1.5
108,641	-		IAI47_21810	0.39	+3.0
108,641	-		IAI47_21810	0.39	-2.0
108,641	-		IAI47_21810	0.39	+1.3
108,641	-		IAI47_21810	0.39	+1.8
108,641	-		IAI47_21810	0.39	-3.0
108,645	+		IAI47_21810	0.39	+0.8
108,645	+		IAI47_21810	0.39	+1.1
108,645	+		IAI47_21810	0.39	+2.8
108,645	+		IAI47_21810	0.39	-1.5
108,645	+		IAI47_21810	0.39	-2.2
108,645	+		IAI47_21810	0.39	-1.3
108,646	-		IAI47_21810	0.39	+0.5
108,646	-		IAI47_21810	0.39	+0.0
108,646	-		IAI47_21810	0.39	-3.5
108,646	-		IAI47_21810	0.39	-3.4
108,646	-		IAI47_21810	0.39	+0.7
108,646	-		IAI47_21810	0.39	-2.5
108,646	-		IAI47_21810	0.39	-2.6
108,646	-		IAI47_21810	0.39	+0.6
108,646	-		IAI47_21810	0.39	-2.0
108,646	-		IAI47_21810	0.39	+0.8
108,646	-		IAI47_21810	0.39	+1.5
108,647	-		IAI47_21810	0.39	+1.0