Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_20685 and IAI47_20690 are separated by 225 nucleotides IAI47_20690 and IAI47_20695 are separated by 9 nucleotides IAI47_20695 and IAI47_20700 are separated by 9 nucleotides IAI47_20700 and IAI47_20705 are separated by 2 nucleotides IAI47_20705 and IAI47_20710 overlap by 17 nucleotides
IAI47_20685: IAI47_20685 - thioredoxin domain-containing protein, at 386,684 to 387,226
_20685
IAI47_20690: IAI47_20690 - ASCH domain-containing protein, at 387,452 to 387,865
_20690
IAI47_20695: IAI47_20695 - HesA/MoeB/ThiF family protein, at 387,875 to 388,843
_20695
IAI47_20700: IAI47_20700 - thiazole synthase, at 388,853 to 389,608
_20700
IAI47_20705: IAI47_20705 - sulfur carrier protein ThiS, at 389,611 to 389,808
_20705
IAI47_20710: IAI47_20710 - FAD-dependent oxidoreductase, at 389,792 to 390,736
_20710
Position (kb) 387
388
389 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 386.885 kb on + strand, within IAI47_20685 at 386.886 kb on - strand, within IAI47_20685 at 386.886 kb on - strand, within IAI47_20685 at 386.886 kb on - strand, within IAI47_20685 at 386.886 kb on - strand, within IAI47_20685 at 386.886 kb on - strand, within IAI47_20685 at 386.887 kb on + strand, within IAI47_20685 at 386.887 kb on + strand, within IAI47_20685 at 386.887 kb on + strand, within IAI47_20685 at 386.888 kb on - strand, within IAI47_20685 at 386.888 kb on - strand, within IAI47_20685 at 386.888 kb on - strand, within IAI47_20685 at 386.888 kb on - strand, within IAI47_20685 at 386.912 kb on - strand, within IAI47_20685 at 387.031 kb on + strand, within IAI47_20685 at 387.032 kb on - strand, within IAI47_20685 at 387.038 kb on + strand, within IAI47_20685 at 387.038 kb on + strand, within IAI47_20685 at 387.039 kb on - strand, within IAI47_20685 at 387.039 kb on - strand, within IAI47_20685 at 387.039 kb on - strand, within IAI47_20685 at 387.048 kb on + strand, within IAI47_20685 at 387.048 kb on + strand, within IAI47_20685 at 387.048 kb on + strand, within IAI47_20685 at 387.049 kb on - strand, within IAI47_20685 at 387.049 kb on - strand, within IAI47_20685 at 387.049 kb on - strand, within IAI47_20685 at 387.094 kb on + strand, within IAI47_20685 at 387.095 kb on - strand, within IAI47_20685 at 387.110 kb on + strand, within IAI47_20685 at 387.110 kb on + strand, within IAI47_20685 at 387.110 kb on + strand, within IAI47_20685 at 387.110 kb on + strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.111 kb on - strand, within IAI47_20685 at 387.128 kb on - strand, within IAI47_20685 at 387.148 kb on + strand, within IAI47_20685 at 387.148 kb on + strand, within IAI47_20685 at 387.149 kb on - strand, within IAI47_20685 at 387.165 kb on + strand, within IAI47_20685 at 387.166 kb on - strand, within IAI47_20685 at 387.166 kb on - strand, within IAI47_20685 at 387.225 kb on - strand at 387.230 kb on + strand at 387.230 kb on + strand at 387.231 kb on - strand at 387.263 kb on + strand at 387.264 kb on - strand at 387.311 kb on + strand at 387.311 kb on + strand at 387.312 kb on - strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.315 kb on + strand at 387.316 kb on - strand at 387.316 kb on - strand at 387.316 kb on - strand at 387.316 kb on - strand at 387.316 kb on - strand at 387.316 kb on - strand at 387.316 kb on - strand at 387.357 kb on + strand at 387.358 kb on - strand at 387.358 kb on - strand at 387.360 kb on + strand at 387.360 kb on + strand at 387.360 kb on + strand at 387.381 kb on + strand at 387.381 kb on + strand at 387.382 kb on - strand at 387.382 kb on - strand at 387.391 kb on - strand at 387.414 kb on + strand at 387.414 kb on + strand at 387.414 kb on + strand at 387.415 kb on - strand at 387.415 kb on - strand at 387.431 kb on + strand at 387.432 kb on - strand at 387.474 kb on + strand at 387.474 kb on + strand at 387.475 kb on - strand at 387.475 kb on - strand at 387.475 kb on - strand at 387.499 kb on + strand, within IAI47_20690 at 387.500 kb on - strand, within IAI47_20690 at 387.500 kb on - strand, within IAI47_20690 at 387.529 kb on - strand, within IAI47_20690 at 387.575 kb on - strand, within IAI47_20690 at 387.691 kb on - strand, within IAI47_20690 at 387.691 kb on - strand, within IAI47_20690 at 387.765 kb on - strand, within IAI47_20690 at 387.788 kb on + strand, within IAI47_20690 at 387.788 kb on + strand, within IAI47_20690 at 387.788 kb on + strand, within IAI47_20690 at 387.788 kb on + strand, within IAI47_20690 at 387.789 kb on - strand, within IAI47_20690 at 387.806 kb on + strand, within IAI47_20690 at 387.806 kb on + strand, within IAI47_20690 at 387.807 kb on - strand, within IAI47_20690 at 387.863 kb on + strand at 387.877 kb on - strand at 387.877 kb on - strand at 387.884 kb on - strand at 387.884 kb on - strand at 387.884 kb on - strand at 387.884 kb on - strand at 388.010 kb on + strand, within IAI47_20695 at 388.010 kb on + strand, within IAI47_20695 at 388.010 kb on + strand, within IAI47_20695 at 388.010 kb on + strand, within IAI47_20695 at 388.040 kb on - strand, within IAI47_20695 at 388.073 kb on - strand, within IAI47_20695 at 388.073 kb on - strand, within IAI47_20695 at 388.073 kb on - strand, within IAI47_20695 at 388.073 kb on - strand, within IAI47_20695 at 388.073 kb on - strand, within IAI47_20695 at 388.120 kb on + strand, within IAI47_20695 at 388.120 kb on + strand, within IAI47_20695 at 388.239 kb on - strand, within IAI47_20695 at 388.239 kb on - strand, within IAI47_20695 at 388.239 kb on - strand, within IAI47_20695 at 388.241 kb on + strand, within IAI47_20695 at 388.241 kb on + strand, within IAI47_20695 at 388.241 kb on + strand, within IAI47_20695 at 388.241 kb on + strand, within IAI47_20695 at 388.241 kb on + strand, within IAI47_20695 at 388.242 kb on - strand, within IAI47_20695 at 388.242 kb on - strand, within IAI47_20695 at 388.242 kb on - strand, within IAI47_20695 at 388.242 kb on - strand, within IAI47_20695 at 388.242 kb on - strand, within IAI47_20695 at 388.242 kb on - strand, within IAI47_20695 at 388.298 kb on + strand, within IAI47_20695 at 388.298 kb on + strand, within IAI47_20695 at 388.298 kb on + strand, within IAI47_20695 at 388.319 kb on - strand, within IAI47_20695 at 388.389 kb on + strand, within IAI47_20695 at 388.389 kb on + strand, within IAI47_20695 at 388.389 kb on + strand, within IAI47_20695 at 388.389 kb on + strand, within IAI47_20695 at 388.390 kb on - strand, within IAI47_20695 at 388.390 kb on - strand, within IAI47_20695 at 388.390 kb on - strand, within IAI47_20695 at 388.396 kb on + strand, within IAI47_20695 at 388.396 kb on + strand, within IAI47_20695 at 388.397 kb on - strand, within IAI47_20695 at 388.461 kb on + strand, within IAI47_20695 at 388.462 kb on - strand, within IAI47_20695 at 388.462 kb on - strand, within IAI47_20695 at 388.462 kb on - strand, within IAI47_20695 at 388.462 kb on - strand, within IAI47_20695 at 388.462 kb on - strand, within IAI47_20695 at 388.465 kb on + strand, within IAI47_20695 at 388.465 kb on + strand, within IAI47_20695 at 388.465 kb on + strand, within IAI47_20695 at 388.465 kb on + strand, within IAI47_20695 at 388.466 kb on - strand, within IAI47_20695 at 388.466 kb on - strand, within IAI47_20695 at 388.466 kb on - strand, within IAI47_20695 at 388.466 kb on - strand, within IAI47_20695 at 388.466 kb on - strand, within IAI47_20695 at 388.523 kb on + strand, within IAI47_20695 at 388.612 kb on + strand, within IAI47_20695 at 388.687 kb on - strand, within IAI47_20695 at 388.697 kb on - strand, within IAI47_20695 at 388.898 kb on - strand at 388.898 kb on - strand at 388.898 kb on - strand at 388.898 kb on - strand at 389.081 kb on - strand, within IAI47_20700 at 389.098 kb on + strand, within IAI47_20700 at 389.099 kb on - strand, within IAI47_20700 at 389.131 kb on + strand, within IAI47_20700 at 389.233 kb on + strand, within IAI47_20700 at 389.233 kb on + strand, within IAI47_20700 at 389.235 kb on + strand, within IAI47_20700 at 389.236 kb on - strand, within IAI47_20700 at 389.415 kb on + strand, within IAI47_20700 at 389.416 kb on + strand, within IAI47_20700 at 389.416 kb on + strand, within IAI47_20700 at 389.416 kb on + strand, within IAI47_20700 at 389.450 kb on + strand, within IAI47_20700 at 389.450 kb on + strand, within IAI47_20700 at 389.450 kb on + strand, within IAI47_20700 at 389.500 kb on + strand, within IAI47_20700 at 389.500 kb on + strand, within IAI47_20700 at 389.556 kb on + strand at 389.567 kb on - strand at 389.601 kb on + strand at 389.612 kb on + strand at 389.613 kb on - strand at 389.676 kb on - strand, within IAI47_20705 at 389.793 kb on + strand at 389.794 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 386,885 + IAI47_20685 0.37 -1.5 386,886 - IAI47_20685 0.37 +3.2 386,886 - IAI47_20685 0.37 +1.1 386,886 - IAI47_20685 0.37 -1.9 386,886 - IAI47_20685 0.37 -1.6 386,886 - IAI47_20685 0.37 -0.1 386,887 + IAI47_20685 0.37 -3.7 386,887 + IAI47_20685 0.37 -1.2 386,887 + IAI47_20685 0.37 +0.9 386,888 - IAI47_20685 0.38 +0.4 386,888 - IAI47_20685 0.38 +0.9 386,888 - IAI47_20685 0.38 +1.3 386,888 - IAI47_20685 0.38 +1.1 386,912 - IAI47_20685 0.42 -0.4 387,031 + IAI47_20685 0.64 -1.8 387,032 - IAI47_20685 0.64 -1.2 387,038 + IAI47_20685 0.65 -2.4 387,038 + IAI47_20685 0.65 +1.0 387,039 - IAI47_20685 0.65 +1.1 387,039 - IAI47_20685 0.65 +1.3 387,039 - IAI47_20685 0.65 +2.6 387,048 + IAI47_20685 0.67 -1.7 387,048 + IAI47_20685 0.67 -2.2 387,048 + IAI47_20685 0.67 +1.3 387,049 - IAI47_20685 0.67 +1.2 387,049 - IAI47_20685 0.67 +2.3 387,049 - IAI47_20685 0.67 +3.9 387,094 + IAI47_20685 0.76 -3.6 387,095 - IAI47_20685 0.76 +1.0 387,110 + IAI47_20685 0.78 -2.8 387,110 + IAI47_20685 0.78 +1.0 387,110 + IAI47_20685 0.78 +1.2 387,110 + IAI47_20685 0.78 -1.7 387,111 - IAI47_20685 0.79 +0.9 387,111 - IAI47_20685 0.79 +2.5 387,111 - IAI47_20685 0.79 -1.0 387,111 - IAI47_20685 0.79 +0.1 387,111 - IAI47_20685 0.79 -3.1 387,111 - IAI47_20685 0.79 -2.2 387,111 - IAI47_20685 0.79 +3.5 387,111 - IAI47_20685 0.79 -2.2 387,111 - IAI47_20685 0.79 -3.5 387,111 - IAI47_20685 0.79 -0.2 387,111 - IAI47_20685 0.79 +3.3 387,128 - IAI47_20685 0.82 -3.3 387,148 + IAI47_20685 0.85 -1.2 387,148 + IAI47_20685 0.85 +0.3 387,149 - IAI47_20685 0.86 -2.1 387,165 + IAI47_20685 0.89 -0.2 387,166 - IAI47_20685 0.89 -1.8 387,166 - IAI47_20685 0.89 +1.0 387,225 - -3.1 387,230 + -0.5 387,230 + -1.8 387,231 - +1.3 387,263 + -1.5 387,264 - -2.7 387,311 + +1.3 387,311 + +2.9 387,312 - +0.8 387,315 + -3.4 387,315 + -1.7 387,315 + -3.7 387,315 + +1.3 387,315 + +1.0 387,315 + +1.0 387,315 + +0.0 387,315 + -2.5 387,316 - +0.4 387,316 - +1.3 387,316 - +3.5 387,316 - -2.4 387,316 - -2.0 387,316 - +1.3 387,316 - +0.3 387,357 + -2.0 387,358 - -3.3 387,358 - +0.9 387,360 + -0.8 387,360 + +2.0 387,360 + -1.0 387,381 + -0.6 387,381 + +1.7 387,382 - -2.1 387,382 - -0.1 387,391 - +1.6 387,414 + -1.0 387,414 + -4.3 387,414 + +0.6 387,415 - +1.3 387,415 - +0.3 387,431 + -2.5 387,432 - +1.7 387,474 + +0.8 387,474 + +1.2 387,475 - -0.4 387,475 - +1.3 387,475 - -0.9 387,499 + IAI47_20690 0.11 -1.0 387,500 - IAI47_20690 0.12 +1.3 387,500 - IAI47_20690 0.12 -3.2 387,529 - IAI47_20690 0.19 +0.2 387,575 - IAI47_20690 0.30 +1.3 387,691 - IAI47_20690 0.58 +1.8 387,691 - IAI47_20690 0.58 -0.2 387,765 - IAI47_20690 0.76 -1.8 387,788 + IAI47_20690 0.81 -1.7 387,788 + IAI47_20690 0.81 +0.1 387,788 + IAI47_20690 0.81 +0.7 387,788 + IAI47_20690 0.81 +0.3 387,789 - IAI47_20690 0.81 -2.6 387,806 + IAI47_20690 0.86 +1.2 387,806 + IAI47_20690 0.86 +0.5 387,807 - IAI47_20690 0.86 -0.6 387,863 + -1.2 387,877 - -2.5 387,877 - -2.9 387,884 - +2.8 387,884 - -1.8 387,884 - -0.5 387,884 - +0.3 388,010 + IAI47_20695 0.14 -2.4 388,010 + IAI47_20695 0.14 -1.0 388,010 + IAI47_20695 0.14 -1.0 388,010 + IAI47_20695 0.14 -1.8 388,040 - IAI47_20695 0.17 +0.1 388,073 - IAI47_20695 0.20 +0.9 388,073 - IAI47_20695 0.20 -3.0 388,073 - IAI47_20695 0.20 -1.0 388,073 - IAI47_20695 0.20 -1.8 388,073 - IAI47_20695 0.20 +2.5 388,120 + IAI47_20695 0.25 -0.7 388,120 + IAI47_20695 0.25 -3.1 388,239 - IAI47_20695 0.38 -0.7 388,239 - IAI47_20695 0.38 -1.5 388,239 - IAI47_20695 0.38 -3.4 388,241 + IAI47_20695 0.38 -3.9 388,241 + IAI47_20695 0.38 -2.1 388,241 + IAI47_20695 0.38 -2.0 388,241 + IAI47_20695 0.38 +0.6 388,241 + IAI47_20695 0.38 -1.5 388,242 - IAI47_20695 0.38 -0.2 388,242 - IAI47_20695 0.38 -2.9 388,242 - IAI47_20695 0.38 -3.0 388,242 - IAI47_20695 0.38 +2.3 388,242 - IAI47_20695 0.38 -0.9 388,242 - IAI47_20695 0.38 -3.6 388,298 + IAI47_20695 0.44 +1.2 388,298 + IAI47_20695 0.44 -1.2 388,298 + IAI47_20695 0.44 -0.2 388,319 - IAI47_20695 0.46 -2.0 388,389 + IAI47_20695 0.53 +1.3 388,389 + IAI47_20695 0.53 +0.4 388,389 + IAI47_20695 0.53 -3.0 388,389 + IAI47_20695 0.53 -2.1 388,390 - IAI47_20695 0.53 -1.0 388,390 - IAI47_20695 0.53 -2.0 388,390 - IAI47_20695 0.53 -3.6 388,396 + IAI47_20695 0.54 -1.5 388,396 + IAI47_20695 0.54 -0.1 388,397 - IAI47_20695 0.54 -1.0 388,461 + IAI47_20695 0.60 +1.7 388,462 - IAI47_20695 0.61 -1.2 388,462 - IAI47_20695 0.61 -1.4 388,462 - IAI47_20695 0.61 -1.5 388,462 - IAI47_20695 0.61 -0.4 388,462 - IAI47_20695 0.61 -0.7 388,465 + IAI47_20695 0.61 +0.8 388,465 + IAI47_20695 0.61 -3.1 388,465 + IAI47_20695 0.61 -3.2 388,465 + IAI47_20695 0.61 -0.2 388,466 - IAI47_20695 0.61 -3.7 388,466 - IAI47_20695 0.61 -2.5 388,466 - IAI47_20695 0.61 -3.2 388,466 - IAI47_20695 0.61 -1.8 388,466 - IAI47_20695 0.61 -3.2 388,523 + IAI47_20695 0.67 +2.3 388,612 + IAI47_20695 0.76 -0.2 388,687 - IAI47_20695 0.84 -2.5 388,697 - IAI47_20695 0.85 -3.4 388,898 - +1.0 388,898 - +0.3 388,898 - -2.6 388,898 - -0.1 389,081 - IAI47_20700 0.30 -3.5 389,098 + IAI47_20700 0.32 -2.2 389,099 - IAI47_20700 0.33 -1.5 389,131 + IAI47_20700 0.37 -2.1 389,233 + IAI47_20700 0.50 +1.0 389,233 + IAI47_20700 0.50 +1.2 389,235 + IAI47_20700 0.51 -1.7 389,236 - IAI47_20700 0.51 -3.1 389,415 + IAI47_20700 0.74 -0.0 389,416 + IAI47_20700 0.74 +1.1 389,416 + IAI47_20700 0.74 -2.7 389,416 + IAI47_20700 0.74 -3.0 389,450 + IAI47_20700 0.79 +1.2 389,450 + IAI47_20700 0.79 -2.4 389,450 + IAI47_20700 0.79 -1.5 389,500 + IAI47_20700 0.86 +0.3 389,500 + IAI47_20700 0.86 -0.2 389,556 + -2.0 389,567 - -3.7 389,601 + +1.3 389,612 + -2.4 389,613 - -2.5 389,676 - IAI47_20705 0.33 -4.3 389,793 + -1.3 389,794 - +1.2
Or see this region's nucleotide sequence