Strain Fitness in Pantoea sp. MT58 around IAI47_13060

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
2,759,666	-				-3.4
2,759,678	+				+4.4
2,759,679	-				-0.7
2,759,679	-				-2.2
2,759,679	-				+1.6
2,759,679	-				-0.2
2,759,679	-				-0.4
2,759,679	-				+2.1
2,759,684	-				+0.6
2,759,746	-				+0.6
2,759,806	-				-1.7
2,759,806	-				-2.0
2,759,806	-				-2.7
2,759,851	-		IAI47_13055	0.13	-1.5
2,759,889	+		IAI47_13055	0.17	+0.3
2,759,890	-		IAI47_13055	0.18	+1.6
2,759,972	+		IAI47_13055	0.27	-1.6
2,759,973	-		IAI47_13055	0.27	+1.4
2,760,094	-		IAI47_13055	0.40	-1.0
2,760,096	+		IAI47_13055	0.40	+1.6
2,760,096	+		IAI47_13055	0.40	-2.6
2,760,096	+		IAI47_13055	0.40	-1.2
2,760,096	+		IAI47_13055	0.40	+1.9
2,760,097	-		IAI47_13055	0.41	+2.5
2,760,114	+		IAI47_13055	0.42	-3.0
2,760,114	+		IAI47_13055	0.42	+1.0
2,760,115	-		IAI47_13055	0.43	-0.7
2,760,115	-		IAI47_13055	0.43	-3.1
2,760,144	+		IAI47_13055	0.46	-0.6
2,760,144	+		IAI47_13055	0.46	-0.1
2,760,144	+		IAI47_13055	0.46	+2.0
2,760,144	+		IAI47_13055	0.46	-3.4
2,760,144	+		IAI47_13055	0.46	-0.6
2,760,145	-		IAI47_13055	0.46	+1.1
2,760,145	-		IAI47_13055	0.46	-3.0
2,760,145	-		IAI47_13055	0.46	+1.6
2,760,145	-		IAI47_13055	0.46	+1.0
2,760,145	-		IAI47_13055	0.46	+1.0
2,760,145	-		IAI47_13055	0.46	+1.4
2,760,205	+		IAI47_13055	0.52	+0.4
2,760,206	-		IAI47_13055	0.53	+0.3
2,760,258	+		IAI47_13055	0.58	+1.6
2,760,259	-		IAI47_13055	0.58	-2.3
2,760,259	-		IAI47_13055	0.58	+0.2
2,760,378	-		IAI47_13055	0.72	-1.2
2,760,512	-				-1.6
2,760,513	+		IAI47_13055	0.87	+2.0
2,760,513	+		IAI47_13055	0.87	-1.4
2,760,513	+		IAI47_13055	0.87	-1.0
2,760,513	+		IAI47_13055	0.87	-2.2
2,760,514	-		IAI47_13055	0.87	+0.3
2,760,514	-		IAI47_13055	0.87	-0.5
2,760,514	-		IAI47_13055	0.87	+0.6
2,760,519	+		IAI47_13055	0.87	-1.0
2,760,519	+		IAI47_13055	0.87	+0.9
2,760,519	+		IAI47_13055	0.87	-1.5
2,760,519	+		IAI47_13055	0.87	-0.3
2,760,519	+		IAI47_13055	0.87	+0.2
2,760,519	+		IAI47_13055	0.87	+0.1
2,760,519	+		IAI47_13055	0.87	-1.2
2,760,519	+		IAI47_13055	0.87	-0.7
2,760,519	+		IAI47_13055	0.87	-3.4
2,760,519	+		IAI47_13055	0.87	+2.1
2,760,520	-		IAI47_13055	0.87	-3.3
2,760,520	-		IAI47_13055	0.87	+0.4
2,760,520	-		IAI47_13055	0.87	+1.9
2,760,520	-		IAI47_13055	0.87	+0.0
2,760,520	-		IAI47_13055	0.87	+0.0
2,760,520	-		IAI47_13055	0.87	-3.4
2,760,520	-		IAI47_13055	0.87	-2.5
2,760,520	-		IAI47_13055	0.87	+0.4
2,760,520	-		IAI47_13055	0.87	-2.9
2,760,520	-		IAI47_13055	0.87	+0.0
2,760,520	-		IAI47_13055	0.87	+0.8
2,760,520	-		IAI47_13055	0.87	+1.7
2,760,520	-		IAI47_13055	0.87	+3.3
2,760,520	-		IAI47_13055	0.87	+0.1
2,760,520	-		IAI47_13055	0.87	+0.7
2,760,520	-		IAI47_13055	0.87	+1.1
2,760,521	+		IAI47_13055	0.87	+2.2
2,760,521	+		IAI47_13055	0.87	-1.2
2,760,521	+		IAI47_13055	0.87	-0.8
2,760,521	+		IAI47_13055	0.87	+1.8
2,760,521	+		IAI47_13055	0.87	+0.7
2,760,521	+		IAI47_13055	0.87	-0.1
2,760,521	+		IAI47_13055	0.87	+0.2
2,760,521	+		IAI47_13055	0.87	+1.3
2,760,522	-		IAI47_13055	0.88	-3.1
2,760,522	-		IAI47_13055	0.88	+0.9
2,760,547	+				-0.1
2,760,597	-				-3.7
2,760,597	-				+1.1
2,760,625	+				+0.3
2,760,625	+				+0.7
2,760,625	+				+0.7
2,760,626	-				-2.2
2,760,630	-				-2.3
2,760,656	-				-2.6
2,760,685	+				-2.0
2,760,685	+				-4.3
2,760,686	-				+0.7
2,760,686	-				+0.3
2,760,695	+				+1.7
2,760,713	+				+0.9
2,760,714	-				-0.2
2,760,714	-				+0.1
2,760,732	+		IAI47_13060	0.11	+3.8
2,760,733	-		IAI47_13060	0.11	-0.5
2,760,733	-		IAI47_13060	0.11	+0.5
2,760,733	-		IAI47_13060	0.11	+1.3
2,760,752	+		IAI47_13060	0.14	+1.1
2,760,753	-		IAI47_13060	0.14	+4.6
2,760,762	-		IAI47_13060	0.15	-0.9
2,760,779	-		IAI47_13060	0.17	-1.9
2,760,779	-		IAI47_13060	0.17	+0.7
2,760,779	-		IAI47_13060	0.17	-2.2
2,760,781	+		IAI47_13060	0.18	-0.3
2,760,781	+		IAI47_13060	0.18	-1.7
2,760,781	+		IAI47_13060	0.18	+1.8
2,760,781	+		IAI47_13060	0.18	-0.4
2,760,781	+		IAI47_13060	0.18	+0.2
2,760,781	+		IAI47_13060	0.18	-0.9
2,760,782	-		IAI47_13060	0.18	-2.4
2,760,782	-		IAI47_13060	0.18	-1.2
2,760,782	-		IAI47_13060	0.18	-2.2
2,760,782	-		IAI47_13060	0.18	+1.4
2,760,782	-		IAI47_13060	0.18	+1.3
2,760,782	-		IAI47_13060	0.18	-3.3
2,760,802	+		IAI47_13060	0.20	+1.3
2,760,802	+		IAI47_13060	0.20	+4.8
2,760,802	+		IAI47_13060	0.20	+0.9
2,760,802	+		IAI47_13060	0.20	+0.5
2,760,802	+		IAI47_13060	0.20	+0.3
2,760,803	-		IAI47_13060	0.21	-2.2
2,760,803	-		IAI47_13060	0.21	-0.6
2,760,836	-		IAI47_13060	0.25	-3.3
2,760,849	+		IAI47_13060	0.27	-2.3
2,760,849	+		IAI47_13060	0.27	-3.5
2,760,850	-		IAI47_13060	0.27	+1.8
2,760,869	+		IAI47_13060	0.30	+0.8
2,760,870	-		IAI47_13060	0.30	-0.3
2,760,870	-		IAI47_13060	0.30	+1.1
2,760,977	+		IAI47_13060	0.45	+1.6
2,760,992	+		IAI47_13060	0.47	+1.6
2,761,232	+		IAI47_13060	0.80	-2.1
2,761,233	-		IAI47_13060	0.80	+2.1
2,761,235	+		IAI47_13060	0.80	-2.5
2,761,235	+		IAI47_13060	0.80	+0.8
2,761,235	+		IAI47_13060	0.80	+1.6
2,761,236	-		IAI47_13060	0.80	-1.2
2,761,236	-		IAI47_13060	0.80	-2.5
2,761,248	+		IAI47_13060	0.82	-1.4
2,761,248	+		IAI47_13060	0.82	-2.6
2,761,249	-		IAI47_13060	0.82	+2.6
2,761,249	-		IAI47_13060	0.82	+1.2
2,761,283	+		IAI47_13060	0.87	+1.3
2,761,284	-		IAI47_13060	0.87	+1.9
2,761,326	-				+3.8
2,761,326	-				-1.9
2,761,356	+				+1.3
2,761,356	+				+0.3
2,761,357	-				+2.1
2,761,357	-				-3.0
2,761,376	+				+3.9
2,761,377	-				-1.4
2,761,394	+				-3.4
2,761,395	-				+1.6
2,761,456	+		IAI47_13065	0.25	-1.3
2,761,456	+		IAI47_13065	0.25	-1.7
2,761,456	+		IAI47_13065	0.25	-3.4
2,761,457	-		IAI47_13065	0.25	-1.6
2,761,633	+				-0.9
2,761,633	+				-1.2
2,761,634	-				-0.5
2,761,634	-				-3.2
2,761,660	+				+0.6
2,761,668	+				-1.0
2,761,669	-				-2.9
2,761,669	-				-0.1
2,761,682	+				-0.9
2,761,683	-				+1.5
2,761,683	-				-0.3
2,761,683	-				-2.6
2,761,683	-				+3.1
2,761,712	+				-1.9
2,761,712	+				+1.4
2,761,713	-				+2.2
2,761,713	-				+0.3
2,761,714	+				+1.9
2,761,714	+				-1.7
2,761,714	+				-1.3
2,761,715	-				+1.4
2,761,715	-				-4.3
2,761,715	-				+0.8
2,761,715	-				-3.3
2,761,715	-				-2.1
2,761,715	-				+0.6
2,761,715	-				-2.7
2,761,715	-				-0.7
2,761,771	+				-2.9
2,761,772	-				+1.6
2,761,772	-				+0.9
2,761,790	+				+0.3
2,761,790	+				-0.5
2,761,791	-				+0.7
2,761,791	-				-2.7
2,761,791	-				-2.7
2,761,814	-				+1.2
2,761,814	-				+0.6
2,761,814	-				-2.1
2,761,820	+				+0.7
2,761,866	+				-3.4
2,761,866	+				+1.0
2,761,867	-				-3.0
2,761,867	-				+1.1
2,761,867	-				+1.9
2,761,875	+				-1.0
2,761,875	+				+0.0
2,761,876	-				+0.2
2,761,876	-				-1.2
2,761,876	-				+2.8
2,761,878	+				-0.6
2,761,899	+				-1.6
2,761,899	+				-2.0
2,761,899	+				-0.8
2,761,900	-				+2.2
2,761,900	-				+2.5
2,761,900	-				+0.0
2,761,900	-				+1.6
2,761,936	+		IAI47_13070	0.14	-1.9
2,761,937	-		IAI47_13070	0.14	+1.6
2,761,937	-		IAI47_13070	0.14	-0.3
2,761,937	-		IAI47_13070	0.14	-1.0
2,761,937	-		IAI47_13070	0.14	-1.0
2,761,937	-		IAI47_13070	0.14	+0.6
2,761,992	+		IAI47_13070	0.35	+1.2
2,761,992	+		IAI47_13070	0.35	-1.0
2,761,992	+		IAI47_13070	0.35	+0.4
2,761,993	-		IAI47_13070	0.35	-2.0
2,761,993	-		IAI47_13070	0.35	+2.2
2,761,993	-		IAI47_13070	0.35	-1.9
2,761,993	-		IAI47_13070	0.35	-1.6
2,761,996	+		IAI47_13070	0.36	+0.4
2,761,996	+		IAI47_13070	0.36	-1.5
2,762,002	+		IAI47_13070	0.39	-2.4
2,762,002	+		IAI47_13070	0.39	-4.2
2,762,002	+		IAI47_13070	0.39	-0.1
2,762,003	-		IAI47_13070	0.39	+0.3
2,762,003	-		IAI47_13070	0.39	+2.8
2,762,003	-		IAI47_13070	0.39	+1.3
2,762,003	-		IAI47_13070	0.39	+0.7
2,762,003	-		IAI47_13070	0.39	+0.7
2,762,003	-		IAI47_13070	0.39	-1.9
2,762,010	+		IAI47_13070	0.42	-1.6
2,762,010	+		IAI47_13070	0.42	-1.0
2,762,010	+		IAI47_13070	0.42	-1.1
2,762,010	+		IAI47_13070	0.42	-1.6
2,762,010	+		IAI47_13070	0.42	+0.3
2,762,011	-		IAI47_13070	0.42	-2.2
2,762,011	-		IAI47_13070	0.42	-2.1
2,762,011	-		IAI47_13070	0.42	-0.0
2,762,011	-		IAI47_13070	0.42	-0.2
2,762,013	+		IAI47_13070	0.43	+1.9
2,762,013	+		IAI47_13070	0.43	+0.0
2,762,028	+		IAI47_13070	0.48	+0.2
2,762,028	+		IAI47_13070	0.48	+0.7
2,762,103	+		IAI47_13070	0.77	-3.3
2,762,103	+		IAI47_13070	0.77	-0.1
2,762,103	+		IAI47_13070	0.77	-2.1
2,762,136	+		IAI47_13070	0.89	-1.3
2,762,136	+		IAI47_13070	0.89	+5.7
2,762,137	-				-0.4
2,762,137	-				+0.6
2,762,137	-				-1.9
2,762,137	-				-2.9
2,762,357	-		IAI47_13075	0.29	-1.0
2,762,365	+		IAI47_13075	0.31	-2.8
2,762,366	-		IAI47_13075	0.31	-2.7
2,762,366	-		IAI47_13075	0.31	+0.8
2,762,366	-		IAI47_13075	0.31	-3.1