Strain Fitness in Pantoea sp. MT58 around IAI47_12145

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
2,571,630	+		IAI47_12135	0.83	+2.0
2,571,630	+		IAI47_12135	0.83	-0.9
2,571,631	-		IAI47_12135	0.83	+0.6
2,571,631	-		IAI47_12135	0.83	+0.9
2,571,631	-		IAI47_12135	0.83	-1.0
2,571,631	-		IAI47_12135	0.83	-0.8
2,571,631	-		IAI47_12135	0.83	-3.2
2,571,631	-		IAI47_12135	0.83	-1.8
2,571,691	-				-0.8
2,571,715	+				+1.6
2,571,767	+				+1.1
2,571,767	+				-1.0
2,571,767	+				+2.2
2,571,767	+				-2.9
2,571,767	+				+4.4
2,571,768	-				+1.4
2,571,768	-				-0.7
2,571,768	-				+0.0
2,571,768	-				+0.6
2,571,768	-				-0.6
2,571,768	-				+0.9
2,571,770	+				-0.6
2,571,770	+				-2.1
2,571,770	+				-1.3
2,571,770	+				-0.1
2,571,770	+				+0.4
2,571,770	+				-1.2
2,571,770	+				-0.8
2,571,771	-				+1.8
2,571,771	-				+0.5
2,571,771	-				+0.8
2,571,771	-				+0.3
2,571,826	+				-1.2
2,571,826	+				-3.2
2,571,920	-		IAI47_12140	0.14	+4.0
2,571,944	+		IAI47_12140	0.17	-1.4
2,571,954	-		IAI47_12140	0.18	+0.2
2,571,954	-		IAI47_12140	0.18	-2.3
2,572,062	+		IAI47_12140	0.32	-0.5
2,572,062	+		IAI47_12140	0.32	-0.7
2,572,062	+		IAI47_12140	0.32	-2.7
2,572,062	+		IAI47_12140	0.32	+2.4
2,572,078	+		IAI47_12140	0.34	+0.4
2,572,079	-		IAI47_12140	0.34	+0.0
2,572,149	+		IAI47_12140	0.43	+1.0
2,572,149	+		IAI47_12140	0.43	-0.7
2,572,149	+		IAI47_12140	0.43	-2.7
2,572,149	+		IAI47_12140	0.43	-1.7
2,572,255	-		IAI47_12140	0.56	+1.6
2,572,256	+		IAI47_12140	0.56	+1.4
2,572,256	+		IAI47_12140	0.56	+1.5
2,572,257	-		IAI47_12140	0.57	-2.8
2,572,257	-		IAI47_12140	0.57	-0.3
2,572,257	-		IAI47_12140	0.57	-0.7
2,572,257	-		IAI47_12140	0.57	-0.2
2,572,257	-		IAI47_12140	0.57	+1.4
2,572,257	-		IAI47_12140	0.57	-2.1
2,572,293	-		IAI47_12140	0.61	+0.2
2,572,314	+		IAI47_12140	0.64	+2.6
2,572,315	-		IAI47_12140	0.64	+0.2
2,572,315	-		IAI47_12140	0.64	+0.2
2,572,315	-		IAI47_12140	0.64	+1.3
2,572,353	+		IAI47_12140	0.69	+1.5
2,572,353	+		IAI47_12140	0.69	+2.4
2,572,354	-		IAI47_12140	0.69	-1.8
2,572,460	+		IAI47_12140	0.83	+2.0
2,572,461	-		IAI47_12140	0.83	+1.0
2,572,494	+		IAI47_12140	0.87	+0.0
2,572,572	+				-0.3
2,572,573	-				-0.7
2,572,573	-				-2.8
2,572,582	+				+1.4
2,572,582	+				+0.7
2,572,583	-				-2.3
2,572,603	-				+1.6
2,572,712	+		IAI47_12145	0.13	+0.7
2,572,713	-		IAI47_12145	0.13	-1.4
2,572,713	-		IAI47_12145	0.13	+1.6
2,572,755	+		IAI47_12145	0.19	+1.4
2,572,756	-		IAI47_12145	0.19	+3.6
2,572,756	-		IAI47_12145	0.19	+0.4
2,572,766	+		IAI47_12145	0.20	+0.2
2,572,766	+		IAI47_12145	0.20	+1.5
2,572,766	+		IAI47_12145	0.20	+0.9
2,572,792	-		IAI47_12145	0.24	+0.4
2,572,827	-		IAI47_12145	0.28	-0.3
2,573,057	+		IAI47_12145	0.59	+1.2
2,573,058	-		IAI47_12145	0.59	+2.2
2,573,074	+		IAI47_12145	0.61	-2.3
2,573,075	-		IAI47_12145	0.61	+2.6
2,573,075	-		IAI47_12145	0.61	+1.5
2,573,075	-		IAI47_12145	0.61	+1.5
2,573,152	+		IAI47_12145	0.71	+0.8
2,573,152	+		IAI47_12145	0.71	-1.2
2,573,152	+		IAI47_12145	0.71	-1.8
2,573,153	-		IAI47_12145	0.71	-1.3
2,573,189	+		IAI47_12145	0.76	+1.0
2,573,207	+		IAI47_12145	0.78	-1.4
2,573,208	-		IAI47_12145	0.79	-0.4
2,573,279	+		IAI47_12145	0.88	+3.0
2,573,280	-		IAI47_12145	0.88	-0.1
2,573,280	-		IAI47_12145	0.88	-3.2
2,573,351	+				+0.2
2,573,351	+				+0.8
2,573,351	+				+1.4
2,573,352	-				+0.9
2,573,352	-				-2.5
2,573,352	-				-0.9
2,573,352	-				-3.0
2,573,352	-				+0.0
2,573,353	+				-1.7
2,573,353	+				+1.2
2,573,353	+				-0.5
2,573,353	+				+0.5
2,573,353	+				+1.9
2,573,353	+				+1.0
2,573,354	-				-1.2
2,573,354	-				+0.0
2,573,354	-				+2.0
2,573,354	-				-2.1
2,573,354	-				+0.3
2,573,354	-				+1.6
2,573,355	+				+0.6
2,573,355	+				+1.7
2,573,355	+				-1.7
2,573,355	+				-0.8
2,573,355	+				-1.2
2,573,356	-				-0.2
2,573,356	-				-1.5
2,573,356	-				+1.1
2,573,356	-				+1.5
2,573,369	+				+0.8
2,573,383	+				-0.4
2,573,391	+				-0.6
2,573,392	-				-0.8
2,573,396	+				+1.0
2,573,396	+				-2.0
2,573,396	+				-0.1
2,573,396	+				+0.3
2,573,397	-				+1.6
2,573,397	-				-2.6
2,573,397	-				-1.5
2,573,397	-				+0.2
2,573,401	+				-1.4
2,573,457	+				+1.1
2,573,457	+				-0.1
2,573,458	-				+0.1
2,573,458	-				-3.7
2,573,458	-				+1.9
2,573,458	-				-0.8
2,573,461	+				-0.4
2,573,461	+				-1.4
2,573,461	+				+1.6
2,573,462	-				-1.8
2,573,462	-				+3.1
2,573,462	-				-3.1
2,573,462	-				+1.6
2,573,494	+				+0.1
2,573,494	+				+1.4
2,573,494	+				-1.8
2,573,495	-				-1.0
2,573,495	-				-2.3
2,573,495	-				+1.6
2,573,557	+		IAI47_12150	0.13	+2.8
2,573,557	+		IAI47_12150	0.13	-2.1
2,573,624	+		IAI47_12150	0.19	+0.5
2,573,624	+		IAI47_12150	0.19	+1.0
2,573,625	-		IAI47_12150	0.19	-0.3
2,573,691	+		IAI47_12150	0.24	+0.8
2,573,692	-		IAI47_12150	0.24	+1.6
2,573,692	-		IAI47_12150	0.24	-1.7
2,573,716	+		IAI47_12150	0.26	-0.3
2,573,716	+		IAI47_12150	0.26	+0.4
2,573,716	+		IAI47_12150	0.26	+2.5
2,573,716	+		IAI47_12150	0.26	-0.8
2,573,717	-		IAI47_12150	0.26	+0.1
2,573,717	-		IAI47_12150	0.26	-2.7
2,573,719	+		IAI47_12150	0.26	+2.3
2,573,719	+		IAI47_12150	0.26	+0.5
2,573,719	+		IAI47_12150	0.26	+0.0
2,573,720	-		IAI47_12150	0.26	+0.3
2,573,727	+		IAI47_12150	0.27	-0.3
2,573,728	-		IAI47_12150	0.27	+1.3
2,573,728	-		IAI47_12150	0.27	-1.2
2,573,751	+		IAI47_12150	0.29	+2.3
2,573,751	+		IAI47_12150	0.29	+0.0
2,573,821	+		IAI47_12150	0.34	+0.2
2,573,821	+		IAI47_12150	0.34	+0.3
2,573,821	+		IAI47_12150	0.34	+2.4
2,573,821	+		IAI47_12150	0.34	-3.0
2,573,821	+		IAI47_12150	0.34	-0.4
2,573,821	+		IAI47_12150	0.34	-1.4
2,573,822	-		IAI47_12150	0.34	-0.2
2,573,822	-		IAI47_12150	0.34	+1.9
2,573,822	-		IAI47_12150	0.34	-0.7
2,573,822	-		IAI47_12150	0.34	+0.1
2,573,822	-		IAI47_12150	0.34	-1.3
2,573,822	-		IAI47_12150	0.34	+0.6
2,573,822	-		IAI47_12150	0.34	+0.9
2,573,822	-		IAI47_12150	0.34	+1.1
2,573,929	+		IAI47_12150	0.43	+0.2
2,573,929	+		IAI47_12150	0.43	-0.5
2,573,947	+		IAI47_12150	0.44	-0.4
2,573,947	+		IAI47_12150	0.44	+0.0
2,573,948	-		IAI47_12150	0.44	-0.6
2,573,948	-		IAI47_12150	0.44	+2.6
2,573,995	+		IAI47_12150	0.48	+1.6
2,574,051	+		IAI47_12150	0.53	-2.8
2,574,051	+		IAI47_12150	0.53	-4.0
2,574,051	+		IAI47_12150	0.53	-0.7
2,574,051	+		IAI47_12150	0.53	+1.2
2,574,051	+		IAI47_12150	0.53	+1.7
2,574,051	+		IAI47_12150	0.53	-0.2
2,574,051	+		IAI47_12150	0.53	-1.8
2,574,052	-		IAI47_12150	0.53	+0.6
2,574,052	-		IAI47_12150	0.53	-0.8
2,574,052	-		IAI47_12150	0.53	-0.9
2,574,052	-		IAI47_12150	0.53	-0.7
2,574,052	-		IAI47_12150	0.53	+1.3
2,574,074	-		IAI47_12150	0.54	+0.0
2,574,114	+		IAI47_12150	0.58	+1.9
2,574,114	+		IAI47_12150	0.58	-0.3
2,574,114	+		IAI47_12150	0.58	-0.0
2,574,114	+		IAI47_12150	0.58	-1.8
2,574,114	+		IAI47_12150	0.58	+3.2
2,574,114	+		IAI47_12150	0.58	+0.6
2,574,114	+		IAI47_12150	0.58	+1.3
2,574,115	-		IAI47_12150	0.58	-2.8
2,574,115	-		IAI47_12150	0.58	+0.4
2,574,115	-		IAI47_12150	0.58	+0.1
2,574,142	+		IAI47_12150	0.60	+0.8
2,574,142	+		IAI47_12150	0.60	+1.6
2,574,143	-		IAI47_12150	0.60	+2.5
2,574,143	-		IAI47_12150	0.60	-1.8
2,574,199	+		IAI47_12150	0.64	-1.6
2,574,199	+		IAI47_12150	0.64	+1.0
2,574,200	-		IAI47_12150	0.64	-3.5
2,574,226	+		IAI47_12150	0.67	+2.9
2,574,227	-		IAI47_12150	0.67	+0.0
2,574,233	-		IAI47_12150	0.67	+1.6
2,574,233	-		IAI47_12150	0.67	+2.7
2,574,233	-		IAI47_12150	0.67	-0.3
2,574,328	+		IAI47_12150	0.75	-1.7
2,574,328	+		IAI47_12150	0.75	-0.3
2,574,328	+		IAI47_12150	0.75	-2.6
2,574,329	-		IAI47_12150	0.75	+1.3
2,574,329	-		IAI47_12150	0.75	+1.4
2,574,366	+		IAI47_12150	0.78	-1.0
2,574,367	-		IAI47_12150	0.78	-1.5
2,574,367	-		IAI47_12150	0.78	-2.4
2,574,367	-		IAI47_12150	0.78	-1.0