Strain Fitness in Pantoea sp. MT58 around IAI47_06925

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
1,455,662	-		IAI47_06920	0.89	-3.1
1,455,662	-		IAI47_06920	0.89	-2.5
1,455,673	+		IAI47_06920	0.89	-0.1
1,455,673	+		IAI47_06920	0.89	-1.6
1,455,691	+				-0.1
1,455,691	+				+2.5
1,455,692	-				+1.0
1,455,748	-				+1.6
1,455,748	-				-2.4
1,455,753	+				+1.7
1,455,753	+				-2.5
1,455,754	-				+1.8
1,455,754	-				+0.4
1,455,769	+				+0.8
1,455,769	+				+1.5
1,455,770	-				+0.5
1,455,791	-				+2.8
1,455,797	-				+0.6
1,455,797	-				-2.9
1,455,799	+				-0.6
1,455,800	-				-0.4
1,455,800	-				+0.7
1,455,829	+				+1.5
1,455,830	-				-0.7
1,455,830	-				-1.9
1,455,883	+				+1.7
1,455,884	-				+4.5
1,455,884	-				-0.3
1,455,903	+				+1.0
1,455,959	+				+0.9
1,455,960	-				+0.1
1,455,967	+				+0.5
1,455,967	+				+3.7
1,455,967	+				+0.9
1,455,967	+				-0.4
1,455,967	+				+3.7
1,455,968	-				+1.3
1,455,968	-				+0.3
1,455,968	-				-1.5
1,455,968	-				-0.2
1,455,968	-				+1.7
1,456,012	+				+1.5
1,456,044	-				-1.7
1,456,044	-				-0.6
1,456,044	-				-0.9
1,456,070	-				-1.9
1,456,070	-				-0.3
1,456,070	-				-1.7
1,456,084	-				+0.4
1,456,092	-				+0.2
1,456,092	-				+3.7
1,456,137	+				-0.9
1,456,137	+				-1.2
1,456,138	-				+1.6
1,456,138	-				-2.5
1,456,150	+				+3.0
1,456,150	+				-0.7
1,456,209	+				+4.3
1,456,209	+				-2.7
1,456,209	+				-1.4
1,456,209	+				+4.2
1,456,210	-				+1.4
1,456,213	+				-1.7
1,456,213	+				+1.0
1,456,213	+				-2.0
1,456,213	+				+2.0
1,456,213	+				-1.4
1,456,213	+				+1.6
1,456,213	+				+0.3
1,456,213	+				-1.9
1,456,214	-				+2.3
1,456,216	+				-2.5
1,456,217	-				-1.7
1,456,217	-				-0.9
1,456,218	+				+2.5
1,456,265	+				-2.0
1,456,265	+				-0.4
1,456,359	+				-2.1
1,456,359	+				-0.9
1,456,359	+				+0.1
1,456,360	-				-1.5
1,456,360	-				-1.3
1,456,360	-				-0.3
1,456,360	-				-1.4
1,456,367	-				-0.8
1,456,455	+				+0.4
1,456,465	+				+3.7
1,456,465	+				-1.1
1,456,465	+				+1.2
1,456,476	+				-1.7
1,456,476	+				+0.2
1,456,476	+				-2.6
1,456,477	-				+1.7
1,456,488	+				+1.6
1,456,488	+				+1.0
1,456,488	+				+1.8
1,456,488	+				+0.8
1,456,488	+				+1.4
1,456,488	+				+0.4
1,456,489	-				+0.1
1,456,489	-				-2.5
1,456,499	+				+1.5
1,456,499	+				+0.7
1,456,506	-				+0.3
1,456,541	+				+1.3
1,456,622	-				-1.3
1,456,737	+				-1.5
1,456,771	+				-0.8
1,456,864	+		IAI47_06925	0.16	-1.6
1,456,918	+		IAI47_06925	0.20	-2.5
1,457,038	+		IAI47_06925	0.28	+1.3
1,457,039	-		IAI47_06925	0.28	+0.9
1,457,158	+		IAI47_06925	0.37	-1.9
1,457,168	+		IAI47_06925	0.37	+1.3
1,457,169	-		IAI47_06925	0.37	+1.6
1,457,169	-		IAI47_06925	0.37	-2.0
1,457,169	-		IAI47_06925	0.37	+1.7
1,457,251	+		IAI47_06925	0.43	+1.6
1,457,251	+		IAI47_06925	0.43	-2.0
1,457,286	-		IAI47_06925	0.45	-0.3
1,457,300	+		IAI47_06925	0.46	-2.3
1,457,308	+		IAI47_06925	0.47	-2.4
1,457,317	+		IAI47_06925	0.48	-2.2
1,457,335	+		IAI47_06925	0.49	-2.4
1,457,335	+		IAI47_06925	0.49	+0.8
1,457,336	-		IAI47_06925	0.49	-1.5
1,457,336	-		IAI47_06925	0.49	-1.5
1,457,336	-		IAI47_06925	0.49	+1.7
1,457,349	+		IAI47_06925	0.50	-2.1
1,457,384	+		IAI47_06925	0.52	-1.7
1,457,389	+		IAI47_06925	0.53	-1.2
1,457,402	+		IAI47_06925	0.54	-3.7
1,457,402	+		IAI47_06925	0.54	-3.1
1,457,402	+		IAI47_06925	0.54	-1.9
1,457,402	+		IAI47_06925	0.54	+0.6
1,457,402	+		IAI47_06925	0.54	-2.1
1,457,403	-		IAI47_06925	0.54	+0.7
1,457,403	-		IAI47_06925	0.54	+0.2
1,457,403	-		IAI47_06925	0.54	+1.6
1,457,403	-		IAI47_06925	0.54	-3.1
1,457,404	+		IAI47_06925	0.54	-0.9
1,457,404	+		IAI47_06925	0.54	+1.1
1,457,404	+		IAI47_06925	0.54	+0.1
1,457,405	-		IAI47_06925	0.54	-2.8
1,457,405	-		IAI47_06925	0.54	+0.2
1,457,405	-		IAI47_06925	0.54	-0.6
1,457,410	+		IAI47_06925	0.54	-2.4
1,457,411	-		IAI47_06925	0.54	-2.0
1,457,443	+		IAI47_06925	0.56	-2.2
1,457,453	-		IAI47_06925	0.57	-2.2
1,457,493	+		IAI47_06925	0.60	-3.4
1,457,493	+		IAI47_06925	0.60	+0.0
1,457,493	+		IAI47_06925	0.60	+0.1
1,457,493	+		IAI47_06925	0.60	+1.2
1,457,494	-		IAI47_06925	0.60	-1.3
1,457,494	-		IAI47_06925	0.60	-1.7
1,457,579	+		IAI47_06925	0.66	-2.3
1,457,579	+		IAI47_06925	0.66	+0.4
1,457,617	+		IAI47_06925	0.69	-3.2
1,457,618	-		IAI47_06925	0.69	-1.3
1,457,740	+		IAI47_06925	0.77	-0.3
1,457,740	+		IAI47_06925	0.77	-3.6
1,457,740	+		IAI47_06925	0.77	-1.7
1,457,740	+		IAI47_06925	0.77	-2.9
1,457,743	+		IAI47_06925	0.77	+0.0
1,457,743	+		IAI47_06925	0.77	-0.3
1,457,744	-		IAI47_06925	0.77	-3.5
1,457,818	+		IAI47_06925	0.83	-2.5
1,457,819	-		IAI47_06925	0.83	+1.7
1,457,867	+		IAI47_06925	0.86	+2.3
1,457,885	+		IAI47_06925	0.87	+1.4
1,457,938	+				-0.7
1,457,939	-				-1.1
1,457,951	+				-2.7
1,457,967	-				+0.6
1,457,981	+				+1.1
1,457,981	+				-1.1
1,457,985	+				+0.8
1,457,985	+				-0.5
1,458,062	+				-0.6
1,458,065	+				+1.2
1,458,133	+				-2.5
1,458,136	+				-2.4
1,458,136	+				+0.4
1,458,155	+				+1.0
1,458,169	+				-2.2
1,458,169	+				-1.1
1,458,169	+				+1.7
1,458,169	+				-0.0
1,458,169	+				-0.0
1,458,169	+				+0.6
1,458,169	+				-1.7
1,458,169	+				-1.1
1,458,169	+				+0.7
1,458,169	+				-0.7
1,458,169	+				-1.1
1,458,171	+				-3.2
1,458,200	+				-1.5
1,458,210	+				+0.1
1,458,221	+				-0.3
1,458,221	+				+0.1
1,458,221	+				-0.0
1,458,221	+				-0.1
1,458,225	+				-0.5
1,458,225	+				-0.5
1,458,225	+				-1.9
1,458,225	+				+0.6
1,458,225	+				-0.8
1,458,225	+				+0.5
1,458,225	+				-0.6
1,458,225	+				-2.3
1,458,225	+				+0.7
1,458,225	+				-3.3
1,458,225	+				-2.4
1,458,225	+				+1.3
1,458,227	+				-0.3
1,458,227	+				-1.0
1,458,268	+				-3.3
1,458,276	+				+0.1
1,458,276	+				+1.7
1,458,309	+				-0.9
1,458,337	+				+1.0
1,458,341	+				+4.3