Strain Fitness in Pantoea sp. MT58 around IAI47_06470

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
1,321,485	+				-3.3
1,321,485	+				-0.7
1,321,485	+				-0.6
1,321,486	-				-2.6
1,321,825	+				+2.1
1,321,825	+				+5.9
1,321,826	-				-1.1
1,322,076	+				-0.8
1,322,076	+				-0.6
1,322,076	+				-0.2
1,322,191	-				+1.3
1,322,268	+				+1.3
1,322,268	+				-3.1
1,322,269	-				+2.7
1,322,291	-				-3.2
1,322,291	-				+4.7
1,322,346	+				-0.3
1,322,352	+				-0.8
1,322,352	+				+0.1
1,322,353	-				-0.6
1,322,353	-				-0.2
1,322,353	-				+1.1
1,322,353	-				+1.7
1,322,357	+				+1.5
1,322,357	+				-0.8
1,322,357	+				-1.7
1,322,357	+				+1.1
1,322,357	+				+0.7
1,322,357	+				+1.5
1,322,357	+				-3.3
1,322,357	+				+0.1
1,322,357	+				-0.0
1,322,358	-				+0.7
1,322,358	-				-0.8
1,322,358	-				+0.9
1,322,358	-				+1.9
1,322,480	+				+1.7
1,322,480	+				-1.3
1,322,481	-				-1.6
1,322,481	-				+2.7
1,322,481	-				-0.6
1,322,515	+				-0.4
1,322,515	+				+0.6
1,322,515	+				-2.4
1,322,516	-				-2.1
1,322,516	-				-1.5
1,322,517	+				+1.7
1,322,517	+				+2.7
1,322,520	+				+0.4
1,322,520	+				+2.7
1,322,520	+				+0.6
1,322,528	+				+1.0
1,322,529	-				-1.3
1,322,529	-				+0.7
1,322,529	-				+0.3
1,322,536	-				+3.4
1,322,538	+				+3.2
1,322,575	+				+1.5
1,322,575	+				-0.0
1,322,576	-				+1.1
1,322,576	-				+2.5
1,322,576	-				+3.3
1,322,593	+				-1.8
1,322,593	+				-1.3
1,322,593	+				+1.8
1,322,593	+				+0.1
1,322,632	+				+0.2
1,322,632	+				+1.7
1,322,633	-				-0.9
1,322,634	+				+3.7
1,322,634	+				+1.7
1,322,635	-				+1.9
1,322,651	+				+0.3
1,322,651	+				-0.6
1,322,678	+				+0.8
1,322,678	+				-2.7
1,322,679	-				-0.3
1,322,722	-		IAI47_06470	0.11	+3.0
1,322,749	-		IAI47_06470	0.12	+0.1
1,322,763	+		IAI47_06470	0.12	-0.9
1,322,763	+		IAI47_06470	0.12	+0.7
1,322,763	+		IAI47_06470	0.12	-1.8
1,322,763	+		IAI47_06470	0.12	+2.0
1,322,763	+		IAI47_06470	0.12	+4.5
1,322,763	+		IAI47_06470	0.12	-2.6
1,322,794	+		IAI47_06470	0.13	-0.3
1,322,794	+		IAI47_06470	0.13	+1.6
1,322,794	+		IAI47_06470	0.13	+4.7
1,322,794	+		IAI47_06470	0.13	+1.7
1,322,794	+		IAI47_06470	0.13	+5.5
1,322,795	-		IAI47_06470	0.13	+0.1
1,322,795	-		IAI47_06470	0.13	-1.1
1,322,795	-		IAI47_06470	0.13	-0.9
1,322,795	-		IAI47_06470	0.13	+1.3
1,322,797	+		IAI47_06470	0.14	+0.7
1,322,797	+		IAI47_06470	0.14	+1.7
1,322,798	-		IAI47_06470	0.14	+1.7
1,322,798	-		IAI47_06470	0.14	-1.8
1,322,798	-		IAI47_06470	0.14	+2.2
1,322,807	-		IAI47_06470	0.14	+1.1
1,322,807	-		IAI47_06470	0.14	-1.1
1,322,833	+		IAI47_06470	0.15	-2.0
1,322,834	-		IAI47_06470	0.15	+1.1
1,322,856	+		IAI47_06470	0.16	+0.9
1,322,890	-		IAI47_06470	0.17	+0.7
1,323,037	+		IAI47_06470	0.22	+1.1
1,323,037	+		IAI47_06470	0.22	+0.5
1,323,037	+		IAI47_06470	0.22	-1.8
1,323,037	+		IAI47_06470	0.22	+2.3
1,323,038	-		IAI47_06470	0.22	+2.7
1,323,038	-		IAI47_06470	0.22	-2.5
1,323,038	-		IAI47_06470	0.22	+3.2
1,323,039	+		IAI47_06470	0.22	-0.6
1,323,040	-		IAI47_06470	0.22	+3.0
1,323,055	+		IAI47_06470	0.23	+1.7
1,323,056	-		IAI47_06470	0.23	+4.7
1,323,100	-		IAI47_06470	0.24	-1.6
1,323,118	-		IAI47_06470	0.25	-1.6
1,323,166	+		IAI47_06470	0.26	+2.0
1,323,180	+		IAI47_06470	0.27	+2.5
1,323,180	+		IAI47_06470	0.27	+0.4
1,323,180	+		IAI47_06470	0.27	-0.1
1,323,181	-		IAI47_06470	0.27	+2.2
1,323,181	-		IAI47_06470	0.27	+0.9
1,323,181	-		IAI47_06470	0.27	+0.7
1,323,231	+		IAI47_06470	0.29	+2.7
1,323,232	-		IAI47_06470	0.29	-0.3
1,323,232	-		IAI47_06470	0.29	-2.4
1,323,232	-		IAI47_06470	0.29	+2.7
1,323,320	+		IAI47_06470	0.32	+2.0
1,323,320	+		IAI47_06470	0.32	+1.7
1,323,321	-		IAI47_06470	0.32	+3.4
1,323,321	-		IAI47_06470	0.32	+1.7
1,323,325	-		IAI47_06470	0.32	+2.2
1,323,325	-		IAI47_06470	0.32	+2.0
1,323,325	-		IAI47_06470	0.32	+0.7
1,323,327	-		IAI47_06470	0.32	+0.3
1,323,406	-		IAI47_06470	0.35	+0.4
1,323,486	+		IAI47_06470	0.38	+1.4
1,323,492	+		IAI47_06470	0.38	+3.2
1,323,493	-		IAI47_06470	0.38	-0.6
1,323,525	+		IAI47_06470	0.39	+2.5
1,323,525	+		IAI47_06470	0.39	+0.2
1,323,525	+		IAI47_06470	0.39	+0.5
1,323,525	+		IAI47_06470	0.39	+2.5
1,323,530	+		IAI47_06470	0.39	+1.2
1,323,530	+		IAI47_06470	0.39	-0.3
1,323,530	+		IAI47_06470	0.39	-0.0
1,323,531	-		IAI47_06470	0.39	-1.6
1,323,552	+		IAI47_06470	0.40	+0.7
1,323,562	-		IAI47_06470	0.40	+0.9
1,323,576	+		IAI47_06470	0.41	+0.4
1,323,576	+		IAI47_06470	0.41	+1.3
1,323,576	+		IAI47_06470	0.41	-1.3
1,323,576	+		IAI47_06470	0.41	-0.0
1,323,576	+		IAI47_06470	0.41	-0.3
1,323,576	+		IAI47_06470	0.41	-0.6
1,323,576	+		IAI47_06470	0.41	+1.1
1,323,576	+		IAI47_06470	0.41	+0.5
1,323,576	+		IAI47_06470	0.41	+1.9
1,323,577	-		IAI47_06470	0.41	-2.8
1,323,577	-		IAI47_06470	0.41	-2.6
1,323,577	-		IAI47_06470	0.41	+1.3
1,323,577	-		IAI47_06470	0.41	-1.5
1,323,577	-		IAI47_06470	0.41	-0.8
1,323,577	-		IAI47_06470	0.41	-0.1
1,323,577	-		IAI47_06470	0.41	-2.2
1,323,577	-		IAI47_06470	0.41	-1.3
1,323,580	+		IAI47_06470	0.41	-0.5
1,323,581	-		IAI47_06470	0.41	-1.6
1,323,581	-		IAI47_06470	0.41	-2.6
1,323,675	+		IAI47_06470	0.44	-3.0
1,323,676	-		IAI47_06470	0.44	-0.6
1,323,676	-		IAI47_06470	0.44	-3.1
1,323,762	-		IAI47_06470	0.47	+0.7
1,323,868	+		IAI47_06470	0.51	-0.3
1,323,869	-		IAI47_06470	0.51	+0.3
1,323,912	-		IAI47_06470	0.53	+2.1
1,323,948	+		IAI47_06470	0.54	+2.1
1,323,948	+		IAI47_06470	0.54	-0.6
1,323,949	-		IAI47_06470	0.54	-1.3
1,323,949	-		IAI47_06470	0.54	+1.3
1,323,984	+		IAI47_06470	0.55	+2.7
1,324,078	+		IAI47_06470	0.58	+2.4
1,324,078	+		IAI47_06470	0.58	-0.6
1,324,078	+		IAI47_06470	0.58	+1.7
1,324,078	+		IAI47_06470	0.58	-1.8
1,324,078	+		IAI47_06470	0.58	-0.9
1,324,078	+		IAI47_06470	0.58	-0.3
1,324,079	-		IAI47_06470	0.58	-2.6
1,324,079	-		IAI47_06470	0.58	-1.1
1,324,079	-		IAI47_06470	0.58	-1.6
1,324,114	+		IAI47_06470	0.60	+2.1
1,324,195	-		IAI47_06470	0.63	+0.1
1,324,206	+		IAI47_06470	0.63	-0.3
1,324,207	-		IAI47_06470	0.63	-1.8
1,324,212	+		IAI47_06470	0.63	-2.1
1,324,227	+		IAI47_06470	0.64	-2.7
1,324,228	-		IAI47_06470	0.64	+1.5
1,324,230	+		IAI47_06470	0.64	-1.3
1,324,244	-		IAI47_06470	0.64	-1.3
1,324,259	-		IAI47_06470	0.65	-0.3
1,324,410	+		IAI47_06470	0.70	+0.9
1,324,410	+		IAI47_06470	0.70	-1.9
1,324,410	+		IAI47_06470	0.70	-2.6
1,324,411	-		IAI47_06470	0.70	-2.9
1,324,465	-		IAI47_06470	0.72	-0.3
1,324,473	+		IAI47_06470	0.72	-1.1
1,324,473	+		IAI47_06470	0.72	+0.5
1,324,474	-		IAI47_06470	0.72	+1.7
1,324,474	-		IAI47_06470	0.72	-0.6
1,324,483	+		IAI47_06470	0.73	-2.1
1,324,483	+		IAI47_06470	0.73	+2.0
1,324,523	+		IAI47_06470	0.74	+3.0
1,324,523	+		IAI47_06470	0.74	-2.1
1,324,523	+		IAI47_06470	0.74	-1.1
1,324,523	+		IAI47_06470	0.74	-3.1
1,324,531	-		IAI47_06470	0.74	+1.5
1,324,562	-		IAI47_06470	0.75	-1.6
1,324,611	-		IAI47_06470	0.77	+0.7
1,324,618	+		IAI47_06470	0.77	+4.9
1,324,621	-		IAI47_06470	0.77	-1.9
1,324,626	+		IAI47_06470	0.78	-1.9
1,324,723	-		IAI47_06470	0.81	-2.9
1,324,805	-		IAI47_06470	0.84	+1.7
1,324,875	+		IAI47_06470	0.86	-0.2
1,324,876	-		IAI47_06470	0.86	-0.9
1,324,914	+		IAI47_06470	0.88	+2.3
1,324,914	+		IAI47_06470	0.88	-1.8
1,324,914	+		IAI47_06470	0.88	+0.7
1,324,914	+		IAI47_06470	0.88	+0.1
1,324,915	-		IAI47_06470	0.88	-0.2
1,324,915	-		IAI47_06470	0.88	+1.7
1,324,915	-		IAI47_06470	0.88	+1.7
1,325,010	+				-0.6
1,325,010	+				-1.6
1,325,010	+				+0.5
1,325,044	-				-2.2
1,325,044	-				+1.5
1,325,044	-				+1.1
1,325,082	-				-0.6
1,325,082	-				-1.0
1,325,154	+				+2.3
1,325,154	+				+1.4
1,325,154	+				-0.4
1,325,154	+				+0.8
1,325,154	+				-1.9
1,325,155	-				+1.4
1,325,155	-				-2.2
1,325,166	+				-1.5
1,325,167	-				+0.6
1,325,167	-				-2.2
1,325,172	+				+2.1
1,325,172	+				+2.9
1,325,173	-				-0.1
1,325,198	+				+3.1
1,325,198	+				+0.9
1,325,198	+				-1.4
1,325,227	+				+2.3
1,325,227	+				-0.5
1,325,227	+				+1.7
1,325,227	+				-0.0
1,325,227	+				-2.3
1,325,227	+				+0.4
1,325,228	-				+0.8
1,325,228	-				-0.7
1,325,316	+				-0.6
1,325,316	+				-1.8
1,325,316	+				-1.1
1,325,316	+				-1.8
1,325,316	+				-0.3
1,325,316	+				-1.1
1,325,317	-				-0.2
1,325,317	-				+0.7
1,325,317	-				-0.3
1,325,317	-				+2.4
1,325,317	-				+1.1
1,325,317	-				-1.8
1,325,317	-				-2.8
1,325,317	-				-1.6
1,325,317	-				+0.2
1,325,355	+				-1.6
1,325,355	+				-1.1
1,325,356	-				+1.7
1,325,356	-				-2.0
1,325,432	-		IAI47_06475	0.18	-3.2
1,325,432	-		IAI47_06475	0.18	-0.3
1,325,529	+		IAI47_06475	0.33	+0.7
1,325,619	-		IAI47_06475	0.47	-2.8
1,325,696	-		IAI47_06475	0.59	-2.0
1,325,716	+		IAI47_06475	0.62	-2.8
1,325,716	+		IAI47_06475	0.62	+0.7
1,325,716	+		IAI47_06475	0.62	-2.6
1,325,717	-				+4.0
1,325,717	-		IAI47_06475	0.62	-0.9
1,325,747	-		IAI47_06475	0.66	-1.8
1,325,748	+		IAI47_06475	0.67	-1.3
1,325,752	+		IAI47_06475	0.67	+1.7
1,325,752	+		IAI47_06475	0.67	-1.8
1,325,761	+		IAI47_06475	0.69	+0.1
1,325,762	-		IAI47_06475	0.69	+0.1
1,325,762	-		IAI47_06475	0.69	+0.1
1,325,762	-		IAI47_06475	0.69	+0.7
1,325,762	-		IAI47_06475	0.69	+1.1
1,325,762	-		IAI47_06475	0.69	-2.0
1,325,762	-		IAI47_06475	0.69	+2.9
1,325,764	+		IAI47_06475	0.69	-0.3
1,325,765	-		IAI47_06475	0.69	+1.7
1,325,776	-		IAI47_06475	0.71	+1.7
1,325,791	+		IAI47_06475	0.73	-2.0
1,325,791	+		IAI47_06475	0.73	+3.7
1,325,791	+		IAI47_06475	0.73	-1.3
1,325,791	+		IAI47_06475	0.73	-1.1
1,325,836	+		IAI47_06475	0.80	-1.6
1,325,837	-		IAI47_06475	0.80	-1.9
1,325,837	-		IAI47_06475	0.80	+1.7
1,325,837	-		IAI47_06475	0.80	+1.7
1,325,870	+		IAI47_06475	0.85	+0.1
1,325,870	+		IAI47_06475	0.85	-0.9
1,325,871	-		IAI47_06475	0.85	-1.6
1,325,871	-		IAI47_06475	0.85	-3.3
1,325,955	-				-1.6
1,325,959	+				-2.3
1,325,959	+				+0.7
1,325,968	+				-2.6
1,325,969	-				-0.9
1,325,976	-				-3.2
1,326,001	+				-0.3
1,326,001	+				+0.1
1,326,001	+				-2.0
1,326,001	+				+1.7
1,326,002	-				+2.1
1,326,002	-				-0.0
1,326,012	-				+1.1
1,326,012	-				+3.2
1,326,023	+				-0.6
1,326,023	+				-0.9
1,326,029	+				-0.6
1,326,030	-				+0.8
1,326,030	-				+1.7
1,326,030	-				-1.1
1,326,053	+				-1.9
1,326,053	+				-0.6
1,326,053	+				+0.1
1,326,054	-				+1.5
1,326,067	-				+1.9
1,326,067	-				+1.4
1,326,124	-				-1.6
1,326,154	+				+0.1
1,326,155	-				+0.1
1,326,177	-				+1.8
1,326,177	-				+0.5
1,326,178	+				+0.1
1,326,178	+				-1.8
1,326,178	+				+2.1
1,326,178	+				+0.7
1,326,179	-				-0.9
1,326,179	-				-0.9
1,326,179	-				+2.7
1,326,179	-				+1.0
1,326,179	-				+1.7
1,326,180	-				+2.6
1,326,201	+				-2.6
1,326,241	-		IAI47_06480	0.10	+0.7