Strain Fitness in Pantoea sp. MT58 around IAI47_00670

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
143,567	+		IAI47_00665	0.33	+2.0
143,567	+		IAI47_00665	0.33	-1.8
143,567	+		IAI47_00665	0.33	+1.3
143,567	+		IAI47_00665	0.33	-0.4
143,567	+		IAI47_00665	0.33	-0.7
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	+0.4
143,567	+		IAI47_00665	0.33	-1.4
143,567	+		IAI47_00665	0.33	+0.6
143,567	+		IAI47_00665	0.33	+1.6
143,567	+		IAI47_00665	0.33	-1.6
143,567	+		IAI47_00665	0.33	-3.8
143,567	+		IAI47_00665	0.33	+0.1
143,567	+		IAI47_00665	0.33	+0.8
143,567	+		IAI47_00665	0.33	-3.8
143,567	+		IAI47_00665	0.33	+1.8
143,567	+		IAI47_00665	0.33	+0.5
143,567	+		IAI47_00665	0.33	-1.8
143,567	+		IAI47_00665	0.33	+0.6
143,568	-		IAI47_00665	0.33	-4.2
143,568	-		IAI47_00665	0.33	-2.0
143,568	-		IAI47_00665	0.33	+0.2
143,568	-		IAI47_00665	0.33	+2.4
143,568	-		IAI47_00665	0.33	+0.7
143,568	-		IAI47_00665	0.33	-2.4
143,568	-		IAI47_00665	0.33	-2.3
143,568	-		IAI47_00665	0.33	-2.3
143,568	-		IAI47_00665	0.33	+1.7
143,568	-		IAI47_00665	0.33	+0.9
143,568	-		IAI47_00665	0.33	+0.7
143,568	-		IAI47_00665	0.33	+0.8
143,568	-		IAI47_00665	0.33	+0.6
143,568	-		IAI47_00665	0.33	-2.2
143,568	-		IAI47_00665	0.33	-0.0
143,568	-		IAI47_00665	0.33	+0.2
143,568	-		IAI47_00665	0.33	-1.6
143,569	+		IAI47_00665	0.33	-0.9
143,569	+		IAI47_00665	0.33	-2.6
143,569	+		IAI47_00665	0.33	-0.4
143,569	+		IAI47_00665	0.33	-3.0
143,569	+		IAI47_00665	0.33	-0.8
143,569	+		IAI47_00665	0.33	-2.3
143,569	+		IAI47_00665	0.33	+1.2
143,569	+		IAI47_00665	0.33	+0.8
143,569	+		IAI47_00665	0.33	-0.7
143,569	+		IAI47_00665	0.33	+1.1
143,569	+		IAI47_00665	0.33	-2.9
143,569	+		IAI47_00665	0.33	+3.9
143,569	+		IAI47_00665	0.33	+0.3
143,569	+		IAI47_00665	0.33	+1.2
143,569	+		IAI47_00665	0.33	-0.5
143,569	+		IAI47_00665	0.33	+0.1
143,569	+		IAI47_00665	0.33	-2.0
143,569	+		IAI47_00665	0.33	-3.2
143,570	-		IAI47_00665	0.33	-3.6
143,570	-		IAI47_00665	0.33	+0.4
143,570	-		IAI47_00665	0.33	+3.0
143,570	-		IAI47_00665	0.33	+1.3
143,570	-		IAI47_00665	0.33	-3.2
143,570	-		IAI47_00665	0.33	-0.8
143,570	-		IAI47_00665	0.33	+1.1
143,570	-		IAI47_00665	0.33	-3.0
143,570	-		IAI47_00665	0.33	-0.7
143,570	-		IAI47_00665	0.33	-1.6
143,570	-		IAI47_00665	0.33	+1.6
143,570	-		IAI47_00665	0.33	+1.8
143,570	-		IAI47_00665	0.33	+0.4
143,572	+		IAI47_00665	0.33	-2.5
143,572	+		IAI47_00665	0.33	-2.6
143,573	-		IAI47_00665	0.33	+0.4
143,573	-		IAI47_00665	0.33	+0.3
143,573	-		IAI47_00665	0.33	-4.0
143,573	-		IAI47_00665	0.33	+1.0
143,573	-		IAI47_00665	0.33	-0.8
143,573	-		IAI47_00665	0.33	+1.6
143,578	+		IAI47_00665	0.34	-3.3
143,578	+		IAI47_00665	0.34	+0.4
143,578	+		IAI47_00665	0.34	-0.0
143,578	+		IAI47_00665	0.34	-2.1
143,579	-		IAI47_00665	0.34	+2.0
143,583	+		IAI47_00665	0.34	-2.4
143,583	+		IAI47_00665	0.34	-1.2
143,584	-		IAI47_00665	0.34	+1.5
143,584	-		IAI47_00665	0.34	+0.5
143,584	-		IAI47_00665	0.34	-2.2
143,584	-		IAI47_00665	0.34	-0.0
143,584	-		IAI47_00665	0.34	+0.8
143,594	+		IAI47_00665	0.35	-2.1
143,621	+		IAI47_00665	0.38	+1.8
143,621	+		IAI47_00665	0.38	-0.6
143,621	+		IAI47_00665	0.38	-0.9
143,621	+		IAI47_00665	0.38	-0.5
143,621	+		IAI47_00665	0.38	-0.0
143,621	+		IAI47_00665	0.38	-2.2
143,622	-		IAI47_00665	0.38	+0.1
143,622	-		IAI47_00665	0.38	-0.5
143,642	+		IAI47_00665	0.40	-3.1
143,642	+		IAI47_00665	0.40	+1.8
143,643	-		IAI47_00665	0.40	-3.1
143,704	+		IAI47_00665	0.46	-1.2
143,729	+		IAI47_00665	0.48	+1.2
143,729	+		IAI47_00665	0.48	-2.8
143,729	+		IAI47_00665	0.48	+1.8
143,729	+		IAI47_00665	0.48	+1.0
143,729	+		IAI47_00665	0.48	-0.5
143,729	+		IAI47_00665	0.48	-1.4
143,729	+		IAI47_00665	0.48	+1.6
143,729	+		IAI47_00665	0.48	-1.5
143,729	+		IAI47_00665	0.48	-1.0
143,729	+		IAI47_00665	0.48	+0.1
143,729	+		IAI47_00665	0.48	-1.2
143,729	+		IAI47_00665	0.48	-0.3
143,729	+		IAI47_00665	0.48	-1.1
143,729	+		IAI47_00665	0.48	-1.6
143,729	+		IAI47_00665	0.48	+1.3
143,729	+		IAI47_00665	0.48	+3.2
143,730	-		IAI47_00665	0.48	-1.0
143,730	-		IAI47_00665	0.48	-0.1
143,730	-		IAI47_00665	0.48	+0.8
143,730	-		IAI47_00665	0.48	-0.5
143,730	-		IAI47_00665	0.48	+1.4
143,730	-		IAI47_00665	0.48	-1.2
143,730	-		IAI47_00665	0.48	-2.2
143,730	-		IAI47_00665	0.48	-0.4
143,730	-		IAI47_00665	0.48	+3.6
143,730	-		IAI47_00665	0.48	+0.8
143,730	-		IAI47_00665	0.48	+1.6
143,730	-		IAI47_00665	0.48	-1.6
143,731	+		IAI47_00665	0.48	-3.6
143,731	+		IAI47_00665	0.48	-3.3
143,731	+		IAI47_00665	0.48	+0.5
143,732	-		IAI47_00665	0.48	-0.8
143,732	-		IAI47_00665	0.48	+1.6
143,732	-		IAI47_00665	0.48	-2.4
143,732	-		IAI47_00665	0.48	+0.9
143,732	-		IAI47_00665	0.48	+1.6
143,732	-		IAI47_00665	0.48	+0.8
143,732	-		IAI47_00665	0.48	+1.4
143,821	-		IAI47_00665	0.57	-1.0
143,831	+		IAI47_00665	0.58	-1.4
143,831	+		IAI47_00665	0.58	-0.0
143,831	+		IAI47_00665	0.58	-4.3
143,832	-		IAI47_00665	0.58	-0.0
143,908	+		IAI47_00665	0.65	-3.2
143,908	+		IAI47_00665	0.65	-0.4
143,908	+		IAI47_00665	0.65	-1.3
143,908	+		IAI47_00665	0.65	-1.1
143,908	+		IAI47_00665	0.65	-2.1
143,908	+		IAI47_00665	0.65	+0.1
143,908	+		IAI47_00665	0.65	+2.0
143,908	+		IAI47_00665	0.65	+1.0
143,908	+		IAI47_00665	0.65	-0.8
143,908	+		IAI47_00665	0.65	+1.1
143,908	+		IAI47_00665	0.65	-1.5
143,909	-		IAI47_00665	0.65	-0.1
143,909	-		IAI47_00665	0.65	+0.0
143,909	-		IAI47_00665	0.65	+0.6
143,909	-		IAI47_00665	0.65	-0.7
143,909	-		IAI47_00665	0.65	-0.9
143,909	-		IAI47_00665	0.65	-1.0
143,909	-		IAI47_00665	0.65	+2.1
143,909	-		IAI47_00665	0.65	-1.0
143,909	-		IAI47_00665	0.65	+1.6
143,909	-		IAI47_00665	0.65	-2.3
143,909	-		IAI47_00665	0.65	+0.4
143,912	+		IAI47_00665	0.66	+2.1
143,912	+		IAI47_00665	0.66	+3.1
143,912	+		IAI47_00665	0.66	-3.8
143,913	-		IAI47_00665	0.66	-3.0
143,913	-		IAI47_00665	0.66	+3.4
143,913	-		IAI47_00665	0.66	+0.4
143,953	+		IAI47_00665	0.69	-1.7
143,953	+		IAI47_00665	0.69	-1.5
143,953	+		IAI47_00665	0.69	+0.4
143,954	-		IAI47_00665	0.70	+4.4
143,954	-		IAI47_00665	0.70	+1.6
143,954	-		IAI47_00665	0.70	-2.2
143,954	-		IAI47_00665	0.70	-3.5
143,967	+		IAI47_00665	0.71	-0.9
143,997	+		IAI47_00665	0.74	+1.2
143,998	-		IAI47_00665	0.74	-1.9
144,029	+		IAI47_00665	0.77	-0.9
144,029	+		IAI47_00665	0.77	+0.0
144,029	+		IAI47_00665	0.77	+0.8
144,029	+		IAI47_00665	0.77	+0.5
144,029	+		IAI47_00665	0.77	-0.7
144,030	-		IAI47_00665	0.77	-2.9
144,030	-		IAI47_00665	0.77	+0.2
144,030	-		IAI47_00665	0.77	-2.7
144,049	+		IAI47_00665	0.79	+2.4
144,049	+		IAI47_00665	0.79	-3.4
144,049	+		IAI47_00665	0.79	-2.8
144,049	+		IAI47_00665	0.79	+1.6
144,049	+		IAI47_00665	0.79	-0.8
144,050	-		IAI47_00665	0.79	+0.6
144,050	-		IAI47_00665	0.79	-0.6
144,050	-		IAI47_00665	0.79	-3.0
144,050	-		IAI47_00665	0.79	+3.4
144,050	-		IAI47_00665	0.79	-2.1
144,050	-		IAI47_00665	0.79	-1.4
144,050	-		IAI47_00665	0.79	+1.4
144,113	+		IAI47_00665	0.85	-2.2
144,113	+		IAI47_00665	0.85	+0.2
144,113	+		IAI47_00665	0.85	-1.9
144,113	+		IAI47_00665	0.85	-1.0
144,113	+		IAI47_00665	0.85	-1.9
144,113	+		IAI47_00665	0.85	-2.5
144,113	+		IAI47_00665	0.85	-2.6
144,114	-		IAI47_00665	0.85	-2.1
144,114	-		IAI47_00665	0.85	-0.1
144,114	-		IAI47_00665	0.85	-2.3
144,114	-		IAI47_00665	0.85	-3.1
144,114	-		IAI47_00665	0.85	+0.6
144,114	-		IAI47_00665	0.85	+0.6
144,133	-		IAI47_00665	0.87	+2.3
144,170	+				+0.7
144,172	+				+2.0
144,172	+				+2.9
144,172	+				+0.5
144,172	+				-1.2
144,172	+				+1.3
144,172	+				-2.3
144,172	+				+0.3
144,172	+				+0.8
144,172	+				-3.6
144,172	+				+1.0
144,172	+				+1.4
144,172	+				-0.8
144,172	+				+0.7
144,172	+				-1.4
144,172	+				+0.6
144,173	-				+0.3
144,173	-				-1.0
144,173	-				+1.1
144,173	-				-0.4
144,173	-				-1.6
144,173	-				+0.7
144,183	-				-2.2
144,188	+				+0.8
144,188	+				-3.4
144,188	+				-0.8
144,189	-				-1.4
144,206	+				-1.8
144,206	+				-2.9
144,206	+				+0.3
144,206	+				+1.7
144,206	+				-0.4
144,206	+				-0.5
144,207	-				-1.6
144,207	-				-2.3
144,207	-				-0.9
144,207	-				-1.8
144,207	-				-2.3
144,207	-				-1.4
144,207	-				-0.4
144,218	+				+2.1
144,218	+				+0.8
144,218	+				-0.4
144,218	+				+0.1
144,218	+				+1.1
144,218	+				+1.0
144,219	-				+2.6
144,219	-				+2.4
144,219	-				-0.1
144,219	-				+0.3
144,219	-				-1.2
144,235	+				+1.5
144,235	+				+0.6
144,235	+				+1.6
144,235	+				-2.3
144,235	+				+1.7
144,235	+				-0.2
144,236	-				-2.5
144,265	+				-1.0
144,266	-				-0.7
144,310	+				-1.6
144,310	+				-2.9
144,310	+				-1.4
144,310	+				-1.9
144,310	+				-2.5
144,310	+				+1.4
144,311	-				-3.1
144,311	-				-1.0
144,311	-				-1.4
144,312	+				-0.9
144,312	+				+1.1
144,312	+				-0.2
144,312	+				+0.3
144,312	+				+0.2
144,312	+				-0.2
144,313	-				+0.8
144,313	-				+1.6
144,313	-				-2.2
144,336	+				-0.5
144,336	+				-2.1
144,337	-				+0.6
144,339	+				+0.8
144,340	-				+0.6
144,358	+				-2.7
144,358	+				+0.4
144,358	+				-0.4
144,359	-				-1.4
144,359	-				+1.1
144,359	-				+0.1
144,359	-				-1.8
144,360	-				-0.8
144,361	+				-2.9
144,361	+				+3.1
144,361	+				-3.1
144,361	+				-0.2
144,362	-				+1.8
144,362	-				-0.8
144,362	-				-0.4
144,372	-				-2.1
144,372	-				-0.0
144,384	+				+1.0
144,385	-				-2.0
144,399	+				+0.4
144,399	+				+0.7
144,400	-				-2.8
144,406	-				-1.3
144,406	-				+1.1
144,414	+				+1.0
144,414	+				+0.7
144,414	+				-0.6
144,414	+				+1.2
144,414	+				+2.4
144,414	+				+0.1
144,414	+				+0.9
144,415	-				-1.6
144,415	-				-2.1
144,415	-				-1.2
144,415	-				-0.2
144,415	-				-1.6
144,415	-				-0.3
144,415	-				-1.5
144,415	-				+3.1
144,417	+				-2.8
144,417	+				+1.1
144,418	-				-0.3
144,441	+				-3.4
144,441	+				+1.2
144,441	+				+2.1
144,442	-				+1.0
144,443	+				-3.0
144,443	+				+2.0
144,443	+				-1.0
144,444	-				+1.6
144,472	+				-2.4
144,472	+				-2.5
144,473	-				-3.6
144,500	+				-1.0
144,500	+				-0.4
144,500	+				+2.5
144,501	-				-0.1
144,501	-				+0.5
144,501	-				-1.8
144,501	-				+2.0
144,523	+				-1.8
144,523	+				-1.0
144,524	-				-0.4
144,538	+				+0.8
144,538	+				-0.3
144,538	+				+0.2
144,574	+				+2.6
144,574	+				-0.3
144,574	+				-0.8
144,574	+				+1.7
144,574	+				+1.2
144,574	+				+1.6
144,574	+				+1.5
144,574	+				-0.0
144,574	+				+0.2
144,574	+				+1.8
144,574	+				+3.9
144,575	-				+1.1
144,575	-				+0.9
144,575	-				+0.2
144,575	-				+1.3
144,575	-				+1.0
144,575	-				-1.2
144,575	-				+2.2
144,575	-				-0.1
144,575	-				+1.1
144,575	-				+0.4
144,604	+				-0.5
144,604	+				+0.2
144,605	-				+1.6
144,623	+				-1.6
144,623	+				+0.9
144,623	+				+1.6
144,623	+				-1.4
144,624	-				+1.5
144,624	-				+1.6
144,624	-				+1.1
144,624	-				+1.2
144,624	-				+0.6
144,653	-		IAI47_00670	0.12	-0.2
144,678	+		IAI47_00670	0.14	-0.1
144,678	+		IAI47_00670	0.14	+1.1
144,679	-		IAI47_00670	0.14	+1.4
144,700	+		IAI47_00670	0.16	+1.1
144,701	-		IAI47_00670	0.16	+1.4
144,701	-		IAI47_00670	0.16	+3.6
144,703	+		IAI47_00670	0.17	+0.1
144,761	+		IAI47_00670	0.22	+0.1
144,761	+		IAI47_00670	0.22	-1.3
144,770	-		IAI47_00670	0.23	+0.4
144,781	-		IAI47_00670	0.24	+3.0
144,800	+		IAI47_00670	0.26	-0.4
144,800	+		IAI47_00670	0.26	+0.2
144,800	+		IAI47_00670	0.26	-2.2
144,800	+		IAI47_00670	0.26	+2.4
144,800	+		IAI47_00670	0.26	+1.4
144,800	+		IAI47_00670	0.26	+1.2
144,800	+		IAI47_00670	0.26	+0.0
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