Experiment: McCas_H2_complete Econazole nitrate salt 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02610 and MMP_RS02615 are separated by 355 nucleotides MMP_RS02615 and MMP_RS02620 are separated by 598 nucleotides
MMP_RS02610: MMP_RS02610 - DUF2162 domain-containing protein, at 488,162 to 488,881
_RS02610
MMP_RS02615: MMP_RS02615 - cobaltochelatase subunit CobN, at 489,237 to 495,425
_RS02615
MMP_RS02620: MMP_RS02620 - DEAD/DEAH box helicase, at 496,024 to 498,303
_RS02620
Position (kb) 489
490
491
492
493
494
495
496 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 488.278 kb on + strand, within MMP_RS02610 at 488.660 kb on - strand, within MMP_RS02610 at 488.762 kb on - strand, within MMP_RS02610 at 488.762 kb on - strand, within MMP_RS02610 at 488.769 kb on + strand, within MMP_RS02610 at 488.921 kb on + strand at 489.039 kb on - strand at 489.095 kb on - strand at 489.115 kb on + strand at 489.115 kb on + strand at 489.115 kb on + strand at 489.118 kb on + strand at 489.119 kb on - strand at 489.120 kb on + strand at 489.121 kb on - strand at 489.136 kb on + strand at 489.137 kb on - strand at 489.137 kb on - strand at 489.148 kb on - strand at 489.198 kb on - strand at 489.309 kb on + strand at 489.309 kb on + strand at 489.440 kb on - strand at 489.443 kb on - strand at 489.488 kb on - strand at 489.488 kb on - strand at 489.489 kb on + strand at 489.495 kb on + strand at 489.590 kb on - strand at 489.597 kb on + strand at 489.649 kb on - strand at 489.651 kb on - strand at 489.651 kb on - strand at 489.685 kb on + strand at 489.685 kb on + strand at 489.699 kb on - strand at 489.714 kb on + strand at 489.843 kb on - strand at 489.918 kb on - strand, within MMP_RS02615 at 489.922 kb on - strand, within MMP_RS02615 at 489.922 kb on - strand, within MMP_RS02615 at 489.922 kb on - strand, within MMP_RS02615 at 489.922 kb on - strand, within MMP_RS02615 at 489.922 kb on - strand, within MMP_RS02615 at 489.922 kb on - strand, within MMP_RS02615 at 489.923 kb on + strand, within MMP_RS02615 at 489.923 kb on + strand, within MMP_RS02615 at 489.938 kb on - strand, within MMP_RS02615 at 489.963 kb on + strand, within MMP_RS02615 at 489.973 kb on + strand, within MMP_RS02615 at 490.062 kb on + strand, within MMP_RS02615 at 490.067 kb on - strand, within MMP_RS02615 at 490.068 kb on + strand, within MMP_RS02615 at 490.069 kb on - strand, within MMP_RS02615 at 490.070 kb on + strand, within MMP_RS02615 at 490.070 kb on + strand, within MMP_RS02615 at 490.070 kb on + strand, within MMP_RS02615 at 490.100 kb on + strand, within MMP_RS02615 at 490.180 kb on - strand, within MMP_RS02615 at 490.185 kb on - strand, within MMP_RS02615 at 490.247 kb on - strand, within MMP_RS02615 at 490.270 kb on + strand, within MMP_RS02615 at 490.279 kb on + strand, within MMP_RS02615 at 490.287 kb on - strand, within MMP_RS02615 at 490.302 kb on - strand, within MMP_RS02615 at 490.303 kb on + strand, within MMP_RS02615 at 490.310 kb on - strand, within MMP_RS02615 at 490.311 kb on + strand, within MMP_RS02615 at 490.317 kb on + strand, within MMP_RS02615 at 490.323 kb on - strand, within MMP_RS02615 at 490.341 kb on - strand, within MMP_RS02615 at 490.387 kb on - strand, within MMP_RS02615 at 490.388 kb on + strand, within MMP_RS02615 at 490.755 kb on + strand, within MMP_RS02615 at 490.859 kb on - strand, within MMP_RS02615 at 490.859 kb on - strand, within MMP_RS02615 at 490.860 kb on + strand, within MMP_RS02615 at 490.861 kb on - strand, within MMP_RS02615 at 490.861 kb on - strand, within MMP_RS02615 at 490.862 kb on + strand, within MMP_RS02615 at 490.862 kb on + strand, within MMP_RS02615 at 490.866 kb on - strand, within MMP_RS02615 at 490.867 kb on + strand, within MMP_RS02615 at 490.897 kb on - strand, within MMP_RS02615 at 490.907 kb on - strand, within MMP_RS02615 at 490.962 kb on - strand, within MMP_RS02615 at 490.962 kb on - strand, within MMP_RS02615 at 491.120 kb on - strand, within MMP_RS02615 at 491.121 kb on + strand, within MMP_RS02615 at 491.198 kb on - strand, within MMP_RS02615 at 491.249 kb on - strand, within MMP_RS02615 at 491.250 kb on + strand, within MMP_RS02615 at 491.254 kb on - strand, within MMP_RS02615 at 491.254 kb on - strand, within MMP_RS02615 at 491.255 kb on + strand, within MMP_RS02615 at 491.262 kb on - strand, within MMP_RS02615 at 491.298 kb on - strand, within MMP_RS02615 at 491.298 kb on - strand, within MMP_RS02615 at 491.374 kb on + strand, within MMP_RS02615 at 491.444 kb on - strand, within MMP_RS02615 at 491.610 kb on - strand, within MMP_RS02615 at 491.624 kb on - strand, within MMP_RS02615 at 491.830 kb on - strand, within MMP_RS02615 at 491.830 kb on - strand, within MMP_RS02615 at 491.876 kb on + strand, within MMP_RS02615 at 491.929 kb on + strand, within MMP_RS02615 at 491.965 kb on - strand, within MMP_RS02615 at 491.983 kb on - strand, within MMP_RS02615 at 492.028 kb on + strand, within MMP_RS02615 at 492.076 kb on - strand, within MMP_RS02615 at 492.077 kb on + strand, within MMP_RS02615 at 492.318 kb on + strand, within MMP_RS02615 at 492.319 kb on - strand, within MMP_RS02615 at 492.322 kb on - strand, within MMP_RS02615 at 492.323 kb on + strand, within MMP_RS02615 at 492.323 kb on + strand, within MMP_RS02615 at 492.323 kb on + strand, within MMP_RS02615 at 492.325 kb on + strand, within MMP_RS02615 at 492.392 kb on - strand, within MMP_RS02615 at 492.424 kb on - strand, within MMP_RS02615 at 492.425 kb on + strand, within MMP_RS02615 at 492.425 kb on + strand, within MMP_RS02615 at 492.437 kb on - strand, within MMP_RS02615 at 492.437 kb on - strand, within MMP_RS02615 at 492.472 kb on + strand, within MMP_RS02615 at 492.480 kb on + strand, within MMP_RS02615 at 492.518 kb on - strand, within MMP_RS02615 at 492.569 kb on - strand, within MMP_RS02615 at 492.598 kb on + strand, within MMP_RS02615 at 492.598 kb on + strand, within MMP_RS02615 at 492.598 kb on + strand, within MMP_RS02615 at 492.606 kb on - strand, within MMP_RS02615 at 492.631 kb on - strand, within MMP_RS02615 at 492.646 kb on + strand, within MMP_RS02615 at 492.646 kb on + strand, within MMP_RS02615 at 492.666 kb on - strand, within MMP_RS02615 at 492.674 kb on - strand, within MMP_RS02615 at 492.677 kb on - strand, within MMP_RS02615 at 492.686 kb on + strand, within MMP_RS02615 at 492.689 kb on - strand, within MMP_RS02615 at 492.690 kb on + strand, within MMP_RS02615 at 492.741 kb on - strand, within MMP_RS02615 at 492.810 kb on + strand, within MMP_RS02615 at 492.812 kb on + strand, within MMP_RS02615 at 493.024 kb on + strand, within MMP_RS02615 at 493.079 kb on + strand, within MMP_RS02615 at 493.137 kb on - strand, within MMP_RS02615 at 493.189 kb on + strand, within MMP_RS02615 at 493.221 kb on + strand, within MMP_RS02615 at 493.232 kb on - strand, within MMP_RS02615 at 493.234 kb on - strand, within MMP_RS02615 at 493.234 kb on - strand, within MMP_RS02615 at 493.234 kb on - strand, within MMP_RS02615 at 493.235 kb on + strand, within MMP_RS02615 at 493.239 kb on + strand, within MMP_RS02615 at 493.239 kb on + strand, within MMP_RS02615 at 493.239 kb on + strand, within MMP_RS02615 at 493.299 kb on - strand, within MMP_RS02615 at 493.305 kb on + strand, within MMP_RS02615 at 493.327 kb on + strand, within MMP_RS02615 at 493.415 kb on - strand, within MMP_RS02615 at 493.416 kb on + strand, within MMP_RS02615 at 493.417 kb on - strand, within MMP_RS02615 at 493.418 kb on + strand, within MMP_RS02615 at 494.386 kb on + strand, within MMP_RS02615 at 495.360 kb on + strand at 495.378 kb on + strand at 495.379 kb on - strand at 495.435 kb on - strand at 495.469 kb on + strand at 495.483 kb on + strand at 495.486 kb on - strand at 495.572 kb on - strand at 495.612 kb on - strand at 495.613 kb on + strand at 495.640 kb on - strand at 495.641 kb on + strand at 495.725 kb on + strand at 495.744 kb on - strand at 495.744 kb on - strand at 495.745 kb on + strand at 495.745 kb on + strand at 495.745 kb on + strand at 495.746 kb on - strand at 495.746 kb on - strand at 495.746 kb on - strand at 495.747 kb on + strand at 495.747 kb on + strand at 495.747 kb on + strand at 495.748 kb on - strand at 495.749 kb on + strand at 495.830 kb on + strand at 495.850 kb on - strand at 495.850 kb on - strand at 495.851 kb on + strand at 495.960 kb on + strand at 495.983 kb on - strand at 495.989 kb on + strand at 495.991 kb on + strand at 496.015 kb on - strand at 496.015 kb on - strand at 496.279 kb on + strand, within MMP_RS02620 at 496.318 kb on - strand, within MMP_RS02620 at 496.320 kb on - strand, within MMP_RS02620
Per-strain Table
Position Strand Gene LocusTag Fraction McCas_H2_complete Econazole nitrate salt 0.02 mM remove 488,278 + MMP_RS02610 0.16 -1.0 488,660 - MMP_RS02610 0.69 -1.1 488,762 - MMP_RS02610 0.83 +0.5 488,762 - MMP_RS02610 0.83 -0.5 488,769 + MMP_RS02610 0.84 +0.0 488,921 + +0.1 489,039 - -0.3 489,095 - +0.8 489,115 + +1.2 489,115 + -0.6 489,115 + +0.2 489,118 + -0.5 489,119 - +1.7 489,120 + -0.9 489,121 - +0.7 489,136 + +0.3 489,137 - +0.5 489,137 - -0.2 489,148 - +0.5 489,198 - +0.6 489,309 + -0.2 489,309 + +0.2 489,440 - -0.8 489,443 - +2.9 489,488 - -0.1 489,488 - -0.8 489,489 + +0.9 489,495 + +0.0 489,590 - -0.7 489,597 + +0.0 489,649 - -1.7 489,651 - +0.7 489,651 - +0.2 489,685 + -0.5 489,685 + -0.6 489,699 - +0.7 489,714 + +2.3 489,843 - -1.2 489,918 - MMP_RS02615 0.11 +0.9 489,922 - MMP_RS02615 0.11 +1.9 489,922 - MMP_RS02615 0.11 +0.5 489,922 - MMP_RS02615 0.11 +0.1 489,922 - MMP_RS02615 0.11 -0.4 489,922 - MMP_RS02615 0.11 -0.7 489,922 - MMP_RS02615 0.11 -1.0 489,923 + MMP_RS02615 0.11 -0.5 489,923 + MMP_RS02615 0.11 +0.4 489,938 - MMP_RS02615 0.11 +0.3 489,963 + MMP_RS02615 0.12 -0.2 489,973 + MMP_RS02615 0.12 +0.1 490,062 + MMP_RS02615 0.13 -0.6 490,067 - MMP_RS02615 0.13 +0.2 490,068 + MMP_RS02615 0.13 +0.8 490,069 - MMP_RS02615 0.13 -0.8 490,070 + MMP_RS02615 0.13 +1.3 490,070 + MMP_RS02615 0.13 +0.7 490,070 + MMP_RS02615 0.13 -0.7 490,100 + MMP_RS02615 0.14 -0.4 490,180 - MMP_RS02615 0.15 -1.2 490,185 - MMP_RS02615 0.15 +0.4 490,247 - MMP_RS02615 0.16 +0.3 490,270 + MMP_RS02615 0.17 -1.5 490,279 + MMP_RS02615 0.17 +0.4 490,287 - MMP_RS02615 0.17 +0.2 490,302 - MMP_RS02615 0.17 -0.1 490,303 + MMP_RS02615 0.17 -0.3 490,310 - MMP_RS02615 0.17 +1.0 490,311 + MMP_RS02615 0.17 -0.1 490,317 + MMP_RS02615 0.17 +0.2 490,323 - MMP_RS02615 0.18 -0.3 490,341 - MMP_RS02615 0.18 +1.7 490,387 - MMP_RS02615 0.19 +0.6 490,388 + MMP_RS02615 0.19 -2.2 490,755 + MMP_RS02615 0.25 +0.1 490,859 - MMP_RS02615 0.26 +0.6 490,859 - MMP_RS02615 0.26 -1.3 490,860 + MMP_RS02615 0.26 +0.0 490,861 - MMP_RS02615 0.26 -0.7 490,861 - MMP_RS02615 0.26 -1.1 490,862 + MMP_RS02615 0.26 -0.1 490,862 + MMP_RS02615 0.26 -1.0 490,866 - MMP_RS02615 0.26 +2.4 490,867 + MMP_RS02615 0.26 -0.5 490,897 - MMP_RS02615 0.27 +0.5 490,907 - MMP_RS02615 0.27 +0.3 490,962 - MMP_RS02615 0.28 -1.1 490,962 - MMP_RS02615 0.28 +0.8 491,120 - MMP_RS02615 0.30 +0.4 491,121 + MMP_RS02615 0.30 -1.0 491,198 - MMP_RS02615 0.32 +0.6 491,249 - MMP_RS02615 0.33 +1.0 491,250 + MMP_RS02615 0.33 -0.9 491,254 - MMP_RS02615 0.33 +0.5 491,254 - MMP_RS02615 0.33 +1.7 491,255 + MMP_RS02615 0.33 -0.5 491,262 - MMP_RS02615 0.33 -0.2 491,298 - MMP_RS02615 0.33 -0.5 491,298 - MMP_RS02615 0.33 +0.3 491,374 + MMP_RS02615 0.35 -0.3 491,444 - MMP_RS02615 0.36 +0.3 491,610 - MMP_RS02615 0.38 +0.7 491,624 - MMP_RS02615 0.39 +0.9 491,830 - MMP_RS02615 0.42 +0.3 491,830 - MMP_RS02615 0.42 -0.1 491,876 + MMP_RS02615 0.43 +0.5 491,929 + MMP_RS02615 0.43 +2.0 491,965 - MMP_RS02615 0.44 +0.3 491,983 - MMP_RS02615 0.44 +0.2 492,028 + MMP_RS02615 0.45 -0.3 492,076 - MMP_RS02615 0.46 -0.6 492,077 + MMP_RS02615 0.46 +0.7 492,318 + MMP_RS02615 0.50 -0.6 492,319 - MMP_RS02615 0.50 -0.4 492,322 - MMP_RS02615 0.50 -0.1 492,323 + MMP_RS02615 0.50 -0.5 492,323 + MMP_RS02615 0.50 -0.5 492,323 + MMP_RS02615 0.50 +0.6 492,325 + MMP_RS02615 0.50 -1.0 492,392 - MMP_RS02615 0.51 +0.2 492,424 - MMP_RS02615 0.51 -1.0 492,425 + MMP_RS02615 0.52 +0.1 492,425 + MMP_RS02615 0.52 +0.0 492,437 - MMP_RS02615 0.52 -0.6 492,437 - MMP_RS02615 0.52 +0.1 492,472 + MMP_RS02615 0.52 +0.0 492,480 + MMP_RS02615 0.52 +1.2 492,518 - MMP_RS02615 0.53 +0.4 492,569 - MMP_RS02615 0.54 -1.7 492,598 + MMP_RS02615 0.54 -0.1 492,598 + MMP_RS02615 0.54 -0.8 492,598 + MMP_RS02615 0.54 -0.2 492,606 - MMP_RS02615 0.54 -0.6 492,631 - MMP_RS02615 0.55 -2.3 492,646 + MMP_RS02615 0.55 -0.6 492,646 + MMP_RS02615 0.55 +0.5 492,666 - MMP_RS02615 0.55 -0.5 492,674 - MMP_RS02615 0.56 -0.5 492,677 - MMP_RS02615 0.56 -0.4 492,686 + MMP_RS02615 0.56 -0.5 492,689 - MMP_RS02615 0.56 -0.3 492,690 + MMP_RS02615 0.56 -3.2 492,741 - MMP_RS02615 0.57 +0.4 492,810 + MMP_RS02615 0.58 -0.6 492,812 + MMP_RS02615 0.58 +2.4 493,024 + MMP_RS02615 0.61 +0.4 493,079 + MMP_RS02615 0.62 +0.1 493,137 - MMP_RS02615 0.63 +0.4 493,189 + MMP_RS02615 0.64 -0.0 493,221 + MMP_RS02615 0.64 -0.7 493,232 - MMP_RS02615 0.65 -0.2 493,234 - MMP_RS02615 0.65 -0.8 493,234 - MMP_RS02615 0.65 -0.0 493,234 - MMP_RS02615 0.65 +0.8 493,235 + MMP_RS02615 0.65 -1.3 493,239 + MMP_RS02615 0.65 +0.7 493,239 + MMP_RS02615 0.65 -0.1 493,239 + MMP_RS02615 0.65 +1.6 493,299 - MMP_RS02615 0.66 +1.1 493,305 + MMP_RS02615 0.66 -0.9 493,327 + MMP_RS02615 0.66 +1.9 493,415 - MMP_RS02615 0.68 +0.3 493,416 + MMP_RS02615 0.68 -1.0 493,417 - MMP_RS02615 0.68 +1.1 493,418 + MMP_RS02615 0.68 -1.2 494,386 + MMP_RS02615 0.83 -0.5 495,360 + +0.7 495,378 + +0.1 495,379 - +0.9 495,435 - +0.2 495,469 + +1.6 495,483 + +0.8 495,486 - +0.5 495,572 - -0.5 495,612 - -0.3 495,613 + +1.0 495,640 - +0.7 495,641 + +1.6 495,725 + +1.0 495,744 - +0.8 495,744 - -0.4 495,745 + -0.8 495,745 + -0.9 495,745 + +0.8 495,746 - +0.2 495,746 - +0.2 495,746 - +0.6 495,747 + +0.3 495,747 + +0.5 495,747 + +0.7 495,748 - -1.1 495,749 + +2.5 495,830 + +1.3 495,850 - +1.0 495,850 - +1.3 495,851 + +0.7 495,960 + +0.5 495,983 - -0.2 495,989 + +0.6 495,991 + +0.7 496,015 - +0.2 496,015 - +1.0 496,279 + MMP_RS02620 0.11 +0.8 496,318 - MMP_RS02620 0.13 -0.4 496,320 - MMP_RS02620 0.13 +1.8
Or see this region's nucleotide sequence