Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06145

Experiment: McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
1,175,091	-		MMP_RS06140	0.75	-1.1
1,175,271	+				+0.7
1,175,819	-				+0.3
1,175,916	+				-2.9
1,176,022	-				-1.0
1,176,023	+				-0.8
1,176,071	-				+0.2
1,176,074	-				-1.1
1,176,075	+				-0.7
1,176,118	-				+0.2
1,176,131	-				+0.4
1,176,132	+				-0.8
1,176,146	-				+0.7
1,176,165	+				-0.0
1,176,167	-				+0.6
1,176,167	-				+1.7
1,176,234	-				-1.0
1,176,234	-				-0.5
1,176,235	+				+0.5
1,176,265	-				+0.6
1,176,265	-				-0.7
1,176,266	+				+2.5
1,176,276	-				+0.6
1,176,277	+				-0.3
1,176,471	-		MMP_RS06145	0.11	-0.1
1,176,550	-		MMP_RS06145	0.12	-0.0
1,176,631	-		MMP_RS06145	0.14	+0.4
1,176,645	-		MMP_RS06145	0.15	-0.4
1,176,646	+		MMP_RS06145	0.15	-1.6
1,176,646	+		MMP_RS06145	0.15	+0.5
1,176,647	-		MMP_RS06145	0.15	-1.3
1,176,665	-		MMP_RS06145	0.15	+0.5
1,176,692	-		MMP_RS06145	0.16	+1.1
1,176,693	+		MMP_RS06145	0.16	-3.9
1,176,693	+		MMP_RS06145	0.16	+0.0
1,176,709	+		MMP_RS06145	0.16	+0.3
1,176,799	+		MMP_RS06145	0.18	+0.4
1,176,802	-		MMP_RS06145	0.18	-2.4
1,176,843	+		MMP_RS06145	0.19	-0.6
1,176,846	-		MMP_RS06145	0.19	-0.2
1,176,920	+		MMP_RS06145	0.21	+1.7
1,176,986	-		MMP_RS06145	0.22	-0.6
1,176,991	-		MMP_RS06145	0.22	-0.3
1,176,992	+		MMP_RS06145	0.22	+1.8
1,176,992	+		MMP_RS06145	0.22	+0.9
1,177,193	-		MMP_RS06145	0.27	+1.4
1,177,208	+		MMP_RS06145	0.27	+0.9
1,177,281	+		MMP_RS06145	0.29	+1.0
1,177,312	+		MMP_RS06145	0.29	-1.9
1,177,312	+		MMP_RS06145	0.29	+0.5
1,177,343	+		MMP_RS06145	0.30	+1.9
1,177,344	-		MMP_RS06145	0.30	-0.4
1,177,345	+		MMP_RS06145	0.30	-0.2
1,177,348	-		MMP_RS06145	0.30	-1.7
1,177,365	+		MMP_RS06145	0.31	-2.4
1,177,385	-		MMP_RS06145	0.31	-1.7
1,177,423	+		MMP_RS06145	0.32	-2.1
1,177,429	-		MMP_RS06145	0.32	+0.5
1,177,438	-		MMP_RS06145	0.32	-0.1
1,177,439	+		MMP_RS06145	0.32	+2.2
1,177,449	+		MMP_RS06145	0.32	-0.1
1,177,541	+		MMP_RS06145	0.34	-0.1
1,177,579	-		MMP_RS06145	0.35	-0.9
1,177,582	+		MMP_RS06145	0.35	-0.6
1,177,588	-		MMP_RS06145	0.36	-1.0
1,177,622	-		MMP_RS06145	0.36	+2.0
1,177,623	+		MMP_RS06145	0.36	-2.2
1,177,686	+		MMP_RS06145	0.38	+0.5
1,177,751	-		MMP_RS06145	0.39	-1.8
1,177,777	+		MMP_RS06145	0.40	-0.5
1,177,858	+		MMP_RS06145	0.42	-0.2
1,177,858	+		MMP_RS06145	0.42	+0.3
1,177,862	+		MMP_RS06145	0.42	-2.9
1,177,929	-		MMP_RS06145	0.43	-1.8
1,177,930	+		MMP_RS06145	0.43	-1.0
1,177,930	+		MMP_RS06145	0.43	-0.3
1,177,980	-		MMP_RS06145	0.44	+0.4
1,177,981	+		MMP_RS06145	0.44	-0.5
1,177,994	-		MMP_RS06145	0.45	+1.1
1,177,996	-		MMP_RS06145	0.45	+0.7
1,177,997	+		MMP_RS06145	0.45	+0.8
1,178,051	-		MMP_RS06145	0.46	-0.9
1,178,081	+		MMP_RS06145	0.47	+0.1
1,178,163	-		MMP_RS06145	0.48	+1.0
1,178,164	+		MMP_RS06145	0.48	+0.4
1,178,235	-		MMP_RS06145	0.50	+0.3
1,178,235	-		MMP_RS06145	0.50	+1.2
1,178,242	+		MMP_RS06145	0.50	-0.4
1,178,272	-		MMP_RS06145	0.51	+0.1
1,178,314	-		MMP_RS06145	0.52	+1.5
1,178,486	+		MMP_RS06145	0.56	+1.2
1,178,493	-		MMP_RS06145	0.56	-1.8
1,178,493	-		MMP_RS06145	0.56	-2.0
1,178,494	+		MMP_RS06145	0.56	-0.9
1,178,494	+		MMP_RS06145	0.56	+0.7
1,178,527	+		MMP_RS06145	0.56	-0.3
1,178,527	+		MMP_RS06145	0.56	+0.9
1,178,770	-		MMP_RS06145	0.62	+1.3
1,178,833	-		MMP_RS06145	0.63	-0.2
1,178,900	-		MMP_RS06145	0.65	-3.4
1,178,900	-		MMP_RS06145	0.65	-1.3
1,178,900	-		MMP_RS06145	0.65	-0.4
1,178,900	-		MMP_RS06145	0.65	-0.8
1,178,928	-		MMP_RS06145	0.65	-0.5
1,178,929	+		MMP_RS06145	0.65	-2.1
1,178,961	-		MMP_RS06145	0.66	-0.5
1,178,992	-		MMP_RS06145	0.67	+0.1
1,178,992	-		MMP_RS06145	0.67	+2.2
1,178,993	+		MMP_RS06145	0.67	-1.8
1,179,047	-		MMP_RS06145	0.68	+0.5
1,179,097	-		MMP_RS06145	0.69	+0.4
1,179,128	+		MMP_RS06145	0.70	+0.6
1,179,189	-		MMP_RS06145	0.71	-0.2
1,179,197	-		MMP_RS06145	0.71	+0.4
1,179,239	-		MMP_RS06145	0.72	+0.0
1,179,242	-		MMP_RS06145	0.72	+1.2
1,179,243	+		MMP_RS06145	0.72	-0.7
1,179,321	+		MMP_RS06145	0.74	+1.1
1,179,361	-		MMP_RS06145	0.75	+0.7
1,179,404	+		MMP_RS06145	0.76	-3.0
1,179,447	+		MMP_RS06145	0.77	+0.6
1,179,454	-		MMP_RS06145	0.77	+1.0
1,179,455	+		MMP_RS06145	0.77	+0.3
1,179,455	+		MMP_RS06145	0.77	+1.8
1,179,525	-		MMP_RS06145	0.79	-1.0
1,179,547	-		MMP_RS06145	0.79	+1.5
1,179,628	-		MMP_RS06145	0.81	-0.9
1,179,677	-		MMP_RS06145	0.82	+0.3
1,179,683	+		MMP_RS06145	0.82	+0.0
1,179,842	-		MMP_RS06145	0.86	+2.8
1,179,896	-		MMP_RS06145	0.87	+1.2
1,179,899	-		MMP_RS06145	0.87	-0.9
1,179,899	-		MMP_RS06145	0.87	+1.1
1,179,903	+		MMP_RS06145	0.87	-0.7
1,179,976	-		MMP_RS06145	0.89	+0.3
1,180,078	-				-2.2
1,180,079	+				+1.4
1,180,157	+				-0.2
1,180,185	-				-0.2
1,180,186	+				+0.8
1,180,189	-				-1.2
1,180,189	-				+1.2
1,180,189	-				+0.5
1,180,189	-				-3.0
1,180,189	-				+0.2
1,180,190	+				+0.2
1,180,190	+				-2.6
1,180,190	+				+0.9
1,180,190	+				-1.7
1,180,223	+				+0.5
1,180,224	-				-1.3
1,180,251	+				-1.2
1,180,251	+				+1.2
1,180,270	-				-1.4
1,180,270	-				+1.5
1,180,271	+				-1.0
1,180,271	+				-0.9
1,180,292	+				-0.5
1,180,292	+				+3.4
1,180,301	-				-0.2
1,180,301	-				-0.1
1,180,301	-				+1.6
1,180,305	-				+0.9
1,180,330	-				-0.1
1,180,364	-				-1.1
1,180,441	+				-0.1
1,180,567	+				-0.2
1,180,653	-				-0.6
1,180,853	+		MMP_RS06150	0.15	-2.1
1,180,868	-		MMP_RS06150	0.16	+0.0
1,180,869	+		MMP_RS06150	0.16	-0.7
1,181,415	+		MMP_RS06150	0.43	-0.7
1,181,422	+		MMP_RS06150	0.43	+0.5