Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2022

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,100,414	+		DVU2020	0.86	+0.1
2,100,528	-				+0.1
2,100,558	-				+0.9
2,100,899	-		DVU2021	0.31	-0.1
2,101,154	-		DVU2021	0.85	+0.1
2,101,330	-				+1.7
2,101,342	-				+0.3
2,101,419	-				+0.4
2,101,484	+				-0.2
2,101,505	+				-0.5
2,101,547	+				-0.7
2,101,547	+				+1.0
2,101,555	-				+0.1
2,101,555	-				-0.6
2,101,572	+		DVU2022	0.10	+0.2
2,101,639	-		DVU2022	0.12	-0.7
2,101,662	+		DVU2022	0.13	+0.1
2,101,679	+		DVU2022	0.13	-0.1
2,101,687	-		DVU2022	0.13	+0.9
2,101,687	-		DVU2022	0.13	-0.7
2,101,816	-		DVU2022	0.17	+0.3
2,101,873	-		DVU2022	0.19	+0.1
2,101,897	-		DVU2022	0.19	-0.2
2,101,936	+		DVU2022	0.21	+0.4
2,102,005	-		DVU2022	0.23	+1.5
2,102,033	-		DVU2022	0.23	+0.2
2,102,038	+		DVU2022	0.23	+0.1
2,102,038	+		DVU2022	0.23	+0.1
2,102,145	+		DVU2022	0.27	-0.4
2,102,195	-		DVU2022	0.28	+0.2
2,102,522	-		DVU2022	0.37	-1.2
2,102,911	-		DVU2022	0.49	-1.2
2,103,450	+		DVU2022	0.64	+0.1
2,103,495	+		DVU2022	0.65	+0.9
2,103,506	+		DVU2022	0.66	+1.0
2,103,509	-		DVU2022	0.66	-1.9
2,103,514	-		DVU2022	0.66	+0.2
2,103,529	-		DVU2022	0.66	+0.5
2,103,646	+		DVU2022	0.70	+0.1
2,103,650	+		DVU2022	0.70	+0.2
2,103,655	+		DVU2022	0.70	+1.7
2,103,660	+		DVU2022	0.70	-0.9
2,103,719	-		DVU2022	0.72	+0.4
2,103,748	+		DVU2022	0.73	+1.1
2,103,773	+		DVU2022	0.73	-0.0
2,103,773	+		DVU2022	0.73	+0.3
2,103,781	-		DVU2022	0.74	+0.1
2,103,781	-		DVU2022	0.74	+0.2
2,103,789	+		DVU2022	0.74	-0.4
2,103,950	-		DVU2022	0.78	-0.0
2,103,995	+		DVU2022	0.80	+0.1
2,104,002	+		DVU2022	0.80	+3.2
2,104,216	-		DVU2022	0.86	-0.6
2,104,289	+		DVU2022	0.88	+1.0
2,104,289	+		DVU2022	0.88	+2.3
2,104,330	-		DVU2022	0.89	+0.2
2,104,388	+				+0.4
2,104,422	+				+0.2
2,104,422	+				+0.0
2,104,470	-				-0.0
2,104,583	+				+0.2
2,104,603	+				+0.7
2,104,727	+				-0.6
2,104,777	+		DVU2023	0.14	-0.4
2,104,799	+		DVU2023	0.18	+0.4
2,104,805	+		DVU2023	0.19	-0.1
2,104,805	+		DVU2023	0.19	-0.4
2,104,805	+		DVU2023	0.19	+0.1
2,104,805	+		DVU2023	0.19	+0.8
2,104,813	-		DVU2023	0.20	+0.3
2,104,813	-		DVU2023	0.20	-2.3
2,105,073	+		DVU2023	0.69	-0.4
2,105,083	-		DVU2023	0.70	+1.1
2,105,197	-				-0.2
2,105,197	-				+1.6
2,105,405	+		DVU2024	0.16	+1.4
2,105,405	+		DVU2024	0.16	-0.1
2,105,455	-		DVU2024	0.20	-0.1
2,105,555	+		DVU2024	0.30	-0.5
2,105,555	+		DVU2024	0.30	-2.5
2,105,563	-		DVU2024	0.30	+0.5