Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0493
Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 561,521 | - | argC | DVU0492 | 0.24 | -0.4 |
| 561,582 | - | argC | DVU0492 | 0.30 | +1.0 |
| 561,700 | + | argC | DVU0492 | 0.41 | -1.5 |
| 561,708 | - | argC | DVU0492 | 0.42 | -1.2 |
| 561,709 | - | argC | DVU0492 | 0.42 | +1.0 |
| 561,719 | + | argC | DVU0492 | 0.43 | -0.6 |
| 561,727 | - | argC | DVU0492 | 0.44 | -1.8 |
| 561,737 | - | argC | DVU0492 | 0.45 | -0.8 |
| 561,830 | - | argC | DVU0492 | 0.53 | -2.1 |
| 561,832 | - | argC | DVU0492 | 0.53 | -1.5 |
| 561,841 | + | argC | DVU0492 | 0.54 | +0.1 |
| 561,858 | - | argC | DVU0492 | 0.56 | -0.9 |
| 561,885 | + | argC | DVU0492 | 0.58 | -1.4 |
| 561,944 | - | argC | DVU0492 | 0.64 | -1.2 |
| 561,959 | + | argC | DVU0492 | 0.65 | -2.5 |
| 562,163 | + | argC | DVU0492 | 0.85 | -1.3 |
| 562,182 | + | argC | DVU0492 | 0.86 | +1.2 |
| 562,190 | - | argC | DVU0492 | 0.87 | -1.5 |
| 562,324 | + | -0.0 | |||
| 562,379 | - | DVU0493 | 0.14 | -0.8 | |
| 562,425 | + | DVU0493 | 0.28 | -1.2 | |
| 562,475 | - | DVU0493 | 0.45 | -0.5 | |
| 562,625 | + | +0.6 | |||
| 562,641 | + | -0.9 | |||
| 562,655 | + | -0.2 | |||
| 562,700 | + | -0.2 | |||
| 562,708 | - | +0.0 |
Or see this region's nucleotide sequence