Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2362

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,458,528	+		DVU2360	0.14	+0.3
2,458,558	+		DVU2360	0.18	-1.1
2,458,627	+		DVU2360	0.26	-0.2
2,458,634	+		DVU2360	0.27	+0.8
2,458,637	-		DVU2360	0.28	-0.6
2,458,677	-		DVU2360	0.32	-0.3
2,458,711	-		DVU2360	0.37	+0.0
2,458,801	+		DVU2360	0.48	+0.1
2,458,839	-		DVU2360	0.53	-0.1
2,458,895	+		DVU2360	0.59	-0.4
2,458,908	-		DVU2360	0.61	-1.2
2,458,930	+		DVU2360	0.64	+0.1
2,458,965	+		DVU2360	0.68	-0.3
2,458,973	-		DVU2360	0.69	+1.1
2,459,022	-		DVU2360	0.75	-0.2
2,459,022	-		DVU2360	0.75	-0.3
2,459,022	-		DVU2360	0.75	+0.7
2,459,086	-		DVU2360	0.83	+0.2
2,459,121	-		DVU2360	0.87	-0.4
2,459,180	+				+1.6
2,459,188	-				+2.2
2,459,204	+				-0.6
2,459,229	+				-1.3
2,459,237	-				+1.1
2,459,237	-				-1.0
2,459,329	+				-0.0
2,459,369	+				+0.6
2,459,370	+				+0.6
2,459,403	-				+2.6
2,459,440	-				-0.1
2,459,485	-				-0.4
2,459,578	+	thiE-2	DVU2362	0.20	+1.8
2,459,578	+	thiE-2	DVU2362	0.20	+3.1
2,459,727	+	thiE-2	DVU2362	0.43	-0.2
2,459,748	-	thiE-2	DVU2362	0.46	+0.3
2,459,978	+	thiE-2	DVU2362	0.81	+1.0
2,460,052	-				-0.8
2,460,061	+				+0.4
2,460,103	-				+0.3
2,460,122	-				+0.1
2,460,314	+	thiM	DVU2363	0.26	-0.3
2,460,322	-	thiM	DVU2363	0.27	+0.6
2,460,322	-	thiM	DVU2363	0.27	-0.3
2,460,412	-	thiM	DVU2363	0.39	-0.2
2,460,468	+	thiM	DVU2363	0.46	-0.4
2,460,477	-	thiM	DVU2363	0.47	-0.2
2,460,487	-	thiM	DVU2363	0.48	+0.8
2,460,494	-	thiM	DVU2363	0.49	-0.6
2,460,494	-	thiM	DVU2363	0.49	-0.2
2,460,504	+	thiM	DVU2363	0.50	+0.1
2,460,571	-	thiM	DVU2363	0.58	+2.1
2,460,597	+	thiM	DVU2363	0.62	-2.2
2,460,597	+	thiM	DVU2363	0.62	-0.6
2,460,605	-	thiM	DVU2363	0.63	+0.5
2,460,637	+	thiM	DVU2363	0.67	+0.0
2,460,675	-	thiM	DVU2363	0.71	-0.0
2,460,791	-	thiM	DVU2363	0.86	+0.3
2,460,827	-				+0.1
2,460,892	-				-0.1
2,460,902	+				+0.0
2,460,902	-				-2.0
2,460,914	+				-0.4
2,460,947	-				-0.1
2,460,947	-				-0.7
2,461,065	+				+0.1