Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0257
Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05% |
---|---|---|---|---|---|
remove | |||||
300,459 | + | +0.1 | |||
300,513 | + | -0.6 | |||
300,544 | + | -1.0 | |||
300,552 | - | -1.6 | |||
300,566 | + | -1.7 | |||
300,574 | - | -1.7 | |||
300,655 | - | +0.2 | |||
300,655 | - | +0.1 | |||
300,718 | + | +1.5 | |||
300,836 | + | -2.8 | |||
300,959 | + | DVU0257 | 0.29 | -0.4 | |
301,113 | + | DVU0257 | 0.63 | -2.0 | |
301,316 | + | -1.1 | |||
301,316 | + | -0.5 | |||
301,361 | + | -1.9 | |||
301,377 | + | -0.1 | |||
301,499 | - | -1.5 | |||
301,508 | + | +1.0 | |||
301,690 | + | DVU0258 | 0.12 | +3.6 | |
301,757 | - | DVU0258 | 0.16 | -1.6 | |
301,757 | - | DVU0258 | 0.16 | -1.7 | |
301,775 | - | DVU0258 | 0.17 | +2.6 | |
301,826 | - | DVU0258 | 0.19 | -0.7 | |
301,840 | - | DVU0258 | 0.20 | +3.0 | |
301,840 | - | DVU0258 | 0.20 | +0.9 | |
301,853 | + | DVU0258 | 0.21 | +0.8 | |
301,983 | - | DVU0258 | 0.27 | -0.1 | |
302,060 | - | DVU0258 | 0.31 | -1.4 | |
302,142 | - | DVU0258 | 0.35 | -1.6 | |
302,157 | - | DVU0258 | 0.36 | +2.3 | |
302,170 | - | DVU0258 | 0.37 | -1.1 | |
302,279 | + | DVU0258 | 0.42 | -1.3 | |
302,279 | - | DVU0258 | 0.42 | -2.1 |
Or see this region's nucleotide sequence