Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3058

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
3,184,215	+		DVU3057	0.36	+2.7
3,184,250	+		DVU3057	0.38	+1.7
3,184,294	+		DVU3057	0.41	+0.1
3,184,323	+		DVU3057	0.43	-1.8
3,184,342	-		DVU3057	0.45	+1.4
3,184,536	-		DVU3057	0.58	-0.0
3,184,536	-		DVU3057	0.58	-1.2
3,184,573	+		DVU3057	0.60	-2.0
3,184,687	-		DVU3057	0.68	-1.4
3,184,711	+		DVU3057	0.69	+1.9
3,184,719	+		DVU3057	0.70	+1.0
3,184,770	-		DVU3057	0.73	-0.3
3,184,834	-		DVU3057	0.78	+1.7
3,184,857	-		DVU3057	0.79	+0.7
3,184,857	-		DVU3057	0.79	+0.7
3,185,063	+				-1.3
3,185,082	-				+0.7
3,185,084	+				-2.5
3,185,104	-				-1.6
3,185,161	+				-0.3
3,185,161	+				-2.3
3,185,161	+				-3.1
3,185,161	+				-2.4
3,185,169	-				-0.6
3,185,169	-				-0.5
3,185,186	+				-0.1
3,185,455	+				-0.8
3,185,476	-				+1.1
3,185,509	-				+1.2
3,185,544	-		DVU3058	0.10	-1.9
3,185,639	+		DVU3058	0.13	-2.2
3,185,639	+		DVU3058	0.13	+2.0
3,185,647	-		DVU3058	0.13	-0.5
3,185,698	+		DVU3058	0.15	+2.1
3,185,706	-		DVU3058	0.15	-0.3
3,185,791	+		DVU3058	0.17	-0.5
3,185,799	-		DVU3058	0.17	+0.5
3,185,810	+		DVU3058	0.18	+1.1
3,185,810	+		DVU3058	0.18	+1.7
3,185,818	-		DVU3058	0.18	-2.2
3,185,876	+		DVU3058	0.19	-1.1
3,185,922	+		DVU3058	0.21	-1.0
3,185,930	-		DVU3058	0.21	+1.1
3,185,958	+		DVU3058	0.22	+0.3
3,186,052	-		DVU3058	0.24	-0.3
3,186,149	-		DVU3058	0.27	-2.1
3,186,243	+		DVU3058	0.29	+1.1
3,186,251	-		DVU3058	0.30	+1.5
3,186,294	+		DVU3058	0.31	+0.4
3,186,349	-		DVU3058	0.32	-1.3
3,186,358	+		DVU3058	0.32	-0.2
3,186,367	+		DVU3058	0.33	-0.4
3,186,451	+		DVU3058	0.35	-2.2
3,186,676	+		DVU3058	0.41	-0.4
3,186,710	+		DVU3058	0.42	-2.2
3,186,720	+		DVU3058	0.42	-0.5
3,186,934	-		DVU3058	0.48	+0.1
3,186,934	-		DVU3058	0.48	-3.6
3,186,934	-		DVU3058	0.48	+1.9
3,187,008	-		DVU3058	0.50	-0.2
3,187,080	-		DVU3058	0.52	-1.1
3,187,087	-		DVU3058	0.52	-2.2
3,187,106	-		DVU3058	0.53	-1.8
3,187,116	-		DVU3058	0.53	-1.0
3,187,145	+		DVU3058	0.54	-2.1
3,187,151	-		DVU3058	0.54	-1.7
3,187,197	+		DVU3058	0.55	-1.1
3,187,262	-		DVU3058	0.57	-1.7
3,187,283	+		DVU3058	0.58	-0.2
3,187,288	+		DVU3058	0.58	-2.0
3,187,296	-		DVU3058	0.58	-0.9
3,187,386	+		DVU3058	0.60	-1.6
3,187,399	-		DVU3058	0.61	-1.4
3,187,438	+		DVU3058	0.62	-1.4
3,187,644	-		DVU3058	0.68	-1.5
3,187,646	-		DVU3058	0.68	+1.2
3,187,654	-		DVU3058	0.68	-0.4
3,187,775	-		DVU3058	0.71	+0.3
3,187,792	+		DVU3058	0.72	-1.6
3,187,837	-		DVU3058	0.73	-0.3
3,187,837	-		DVU3058	0.73	-1.3
3,187,837	-		DVU3058	0.73	+0.7
3,187,879	-		DVU3058	0.74	-0.4
3,187,927	-		DVU3058	0.75	+0.1
3,187,933	+		DVU3058	0.75	-1.8
3,187,938	+		DVU3058	0.76	-1.4
3,187,940	+		DVU3058	0.76	-1.5
3,187,941	-		DVU3058	0.76	-1.1
3,187,941	-		DVU3058	0.76	-0.4
3,187,995	+		DVU3058	0.77	+0.4
3,187,996	-		DVU3058	0.77	+0.8
3,188,019	+		DVU3058	0.78	-0.7
3,188,058	+		DVU3058	0.79	+2.3
3,188,110	-		DVU3058	0.80	+1.7
3,188,110	-		DVU3058	0.80	+0.2
3,188,223	-		DVU3058	0.83	+0.3
3,188,225	+		DVU3058	0.83	+1.1
3,188,232	+		DVU3058	0.84	-0.6
3,188,250	-		DVU3058	0.84	-2.7
3,188,277	-		DVU3058	0.85	-1.7
3,188,279	+		DVU3058	0.85	+1.3
3,188,287	-		DVU3058	0.85	-0.2
3,188,336	+		DVU3058	0.86	+3.1
3,188,344	-		DVU3058	0.87	+0.7
3,188,359	-		DVU3058	0.87	-0.9
3,188,388	+		DVU3058	0.88	-0.4
3,188,430	+		DVU3058	0.89	-1.0
3,188,537	+				-0.5
3,188,556	+				-0.4
3,188,564	-				+1.3
3,188,754	-				-1.0
3,188,794	+				-2.4
3,188,853	+				-0.9
3,188,877	-				+1.7
3,188,886	+				+1.6
3,188,886	-				-0.8
3,188,906	-				+3.1
3,188,931	+				-1.0