Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2890

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,987,183	-		DVU2888	0.86	-1.2
2,987,230	+				-2.1
2,987,230	+				-1.3
2,987,262	+				+1.4
2,987,289	+				-2.0
2,987,297	-				-1.6
2,987,471	+		DVU2889	0.33	-2.2
2,987,509	-		DVU2889	0.40	-1.4
2,987,574	-		DVU2889	0.52	-2.6
2,987,649	+		DVU2889	0.65	+0.4
2,987,717	+		DVU2889	0.78	-0.1
2,987,899	-				-1.2
2,987,984	-				-1.5
2,988,085	-				-2.4
2,988,086	+				+1.5
2,988,086	+				+3.7
2,988,087	+				+2.5
2,988,224	-		DVU2890	0.25	+2.7
2,988,293	+		DVU2890	0.35	-1.1
2,988,331	+		DVU2890	0.41	+3.1
2,988,370	-		DVU2890	0.46	-2.2
2,988,385	-		DVU2890	0.49	+0.5
2,988,391	-		DVU2890	0.49	+3.7
2,988,396	-		DVU2890	0.50	-1.6
2,988,396	-		DVU2890	0.50	+2.4
2,988,443	+		DVU2890	0.57	-1.1
2,988,451	-		DVU2890	0.58	-1.7
2,988,480	+		DVU2890	0.62	-0.5
2,988,586	+		DVU2890	0.78	-1.3
2,988,702	-				-2.3
2,988,715	+				-2.4
2,988,846	+	nikR	DVU2891	0.22	-0.2
2,988,937	+	nikR	DVU2891	0.43	-1.3
2,988,949	+	nikR	DVU2891	0.46	-1.7
2,988,957	-	nikR	DVU2891	0.48	-0.1
2,988,968	-	nikR	DVU2891	0.51	+0.8
2,989,055	-	nikR	DVU2891	0.71	+2.0
2,989,104	+	nikR	DVU2891	0.83	-1.9
2,989,113	-	nikR	DVU2891	0.85	+1.5
2,989,140	-				+1.4
2,989,162	+				+3.7
2,989,162	+				+0.7