Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2705

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,809,874	-		DVU2702	0.11	+1.4
2,809,904	+		DVU2702	0.21	+1.7
2,809,937	+		DVU2702	0.33	+2.1
2,809,947	+		DVU2702	0.37	+0.5
2,809,985	-		DVU2702	0.50	-2.2
2,809,991	-		DVU2702	0.52	+0.5
2,810,021	-		DVU2702	0.63	-1.8
2,810,038	+		DVU2702	0.69	-1.2
2,810,067	-		DVU2702	0.79	-1.3
2,810,084	+		DVU2702	0.85	-1.4
2,810,092	-		DVU2702	0.88	-1.5
2,810,212	+		DVU2703	0.46	+0.7
2,810,303	+		DVU2703	0.88	+0.1
2,810,375	+				-2.1
2,810,383	-		DVU2704	0.10	+0.6
2,810,505	+		DVU2704	0.34	+1.2
2,810,562	+		DVU2704	0.45	+2.4
2,810,570	-		DVU2704	0.46	-1.3
2,810,576	+		DVU2704	0.48	+1.2
2,810,681	+		DVU2704	0.68	+0.5
2,810,720	+		DVU2704	0.75	+4.7
2,810,787	+		DVU2704	0.88	-1.0
2,810,787	+		DVU2704	0.88	+2.1
2,810,795	-		DVU2704	0.90	+0.3
2,810,804	-				-0.6
2,810,811	-				+3.1
2,810,843	+				-1.1
2,810,900	+				+1.5
2,810,915	-				-0.8
2,811,024	-		DVU2705	0.11	-1.4
2,811,069	+		DVU2705	0.13	+2.1
2,811,069	+		DVU2705	0.13	-3.1
2,811,077	-		DVU2705	0.14	+0.9
2,811,077	-		DVU2705	0.14	-0.2
2,811,110	+		DVU2705	0.16	+2.7
2,811,197	-		DVU2705	0.21	+1.4
2,811,252	-		DVU2705	0.24	+1.2
2,811,252	-		DVU2705	0.24	+2.7
2,811,309	+		DVU2705	0.28	+3.1
2,811,418	-		DVU2705	0.34	+0.5
2,811,433	+		DVU2705	0.35	-3.1
2,811,437	+		DVU2705	0.35	-1.4
2,811,460	-		DVU2705	0.37	-1.2
2,811,493	+		DVU2705	0.39	-2.3
2,811,493	+		DVU2705	0.39	-0.1
2,811,501	-		DVU2705	0.39	-2.5
2,811,555	+		DVU2705	0.42	-1.4
2,811,574	+		DVU2705	0.44	-1.7
2,811,605	-		DVU2705	0.45	+1.7
2,811,612	-		DVU2705	0.46	+3.7
2,811,633	+		DVU2705	0.47	-2.9
2,811,633	+		DVU2705	0.47	+0.6
2,811,641	-		DVU2705	0.48	-1.5
2,811,643	+		DVU2705	0.48	+1.9
2,811,671	-		DVU2705	0.49	-1.6
2,811,671	-		DVU2705	0.49	-1.6
2,811,700	+		DVU2705	0.51	+0.1
2,811,700	+		DVU2705	0.51	-1.0
2,811,708	-		DVU2705	0.52	-0.2
2,811,709	-		DVU2705	0.52	-0.8
2,811,709	-		DVU2705	0.52	+0.1
2,811,728	+		DVU2705	0.53	-1.1
2,811,764	-		DVU2705	0.55	-1.6
2,811,774	+		DVU2705	0.55	-0.8
2,811,789	-		DVU2705	0.56	-1.1
2,811,789	-		DVU2705	0.56	-1.6
2,811,815	+		DVU2705	0.58	-1.8
2,811,815	-		DVU2705	0.58	-0.0
2,811,823	+		DVU2705	0.58	+2.1
2,811,823	-		DVU2705	0.58	+0.2
2,811,823	-		DVU2705	0.58	-1.8
2,812,160	+		DVU2705	0.78	+2.4
2,812,206	-		DVU2705	0.81	-0.9
2,812,208	+		DVU2705	0.81	-1.2
2,812,208	+		DVU2705	0.81	+1.4
2,812,216	-		DVU2705	0.82	+0.5
2,812,217	-		DVU2705	0.82	+0.8
2,812,287	+		DVU2705	0.86	+2.1
2,812,287	+		DVU2705	0.86	+4.7
2,812,287	+		DVU2705	0.86	-1.4
2,812,295	-		DVU2705	0.87	+3.7
2,812,295	-		DVU2705	0.87	-1.7
2,812,300	-		DVU2705	0.87	+1.0
2,812,300	-		DVU2705	0.87	-2.3
2,812,302	+		DVU2705	0.87	-1.7
2,812,349	+		DVU2705	0.90	-1.7
2,812,357	-				-1.0
2,812,486	-				+1.9
2,812,576	+				-1.6
2,812,576	+				+1.0
2,812,576	+				+1.9
2,812,576	+				-1.1
2,812,584	-				+1.0
2,812,605	+				-0.6
2,812,610	+				+0.5
2,812,628	-				-1.9
2,812,643	+				+0.7
2,812,676	+				-1.7
2,812,740	+		DVU2706	0.14	-0.5
2,812,789	+		DVU2706	0.16	+1.6
2,812,841	-		DVU2706	0.19	+1.7
2,812,841	-		DVU2706	0.19	-1.6
2,813,011	-		DVU2706	0.29	-0.4
2,813,016	+		DVU2706	0.30	+3.7
2,813,024	-		DVU2706	0.30	+2.7
2,813,024	-		DVU2706	0.30	-0.3
2,813,024	-		DVU2706	0.30	-0.9
2,813,091	-		DVU2706	0.34	-0.7
2,813,097	-		DVU2706	0.34	-0.9
2,813,111	-		DVU2706	0.35	-2.1
2,813,146	+		DVU2706	0.37	-1.6
2,813,192	+		DVU2706	0.40	-1.3
2,813,213	+		DVU2706	0.41	-1.4
2,813,213	+		DVU2706	0.41	-1.4
2,813,245	+		DVU2706	0.43	-0.6
2,813,277	-		DVU2706	0.45	+0.4
2,813,279	+		DVU2706	0.45	-0.8
2,813,304	-		DVU2706	0.46	-1.0
2,813,305	-		DVU2706	0.46	+0.5
2,813,328	-		DVU2706	0.48	+0.7
2,813,380	+		DVU2706	0.51	-1.6
2,813,418	+		DVU2706	0.53	+1.9
2,813,455	+		DVU2706	0.55	-2.0