Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2188

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,285,234	-				-2.4
2,285,297	+				-0.5
2,285,442	-		DVU2187	0.30	-0.7
2,285,443	-		DVU2187	0.30	-2.8
2,285,453	-		DVU2187	0.32	+0.6
2,285,480	+		DVU2187	0.37	+0.5
2,285,530	-		DVU2187	0.46	-1.8
2,285,550	-		DVU2187	0.50	-1.2
2,285,572	+		DVU2187	0.54	+2.2
2,285,658	+		DVU2187	0.70	+2.0
2,285,658	+		DVU2187	0.70	-2.5
2,285,904	-				+4.8
2,285,936	+				+0.2
2,285,937	-				+1.1
2,285,944	-				-0.5
2,286,061	-				+3.2
2,286,061	-				+4.8
2,286,061	-				-1.4
2,286,141	+				+1.2
2,286,151	-				+3.2
2,286,213	+				-0.1
2,286,255	-				-2.9
2,286,255	-				-2.0
2,286,335	-				+0.9
2,286,386	+				-1.4
2,286,386	+				-0.9
2,286,386	+				+2.2
2,286,433	+				+1.6
2,286,484	+		DVU2188	0.10	-0.4
2,286,566	-		DVU2188	0.13	-2.3
2,286,660	-		DVU2188	0.17	-2.5
2,286,691	+		DVU2188	0.18	-1.0
2,286,751	+		DVU2188	0.21	-0.2
2,286,799	-		DVU2188	0.23	+0.5
2,286,802	+		DVU2188	0.23	-3.4
2,286,923	+		DVU2188	0.28	+2.0
2,286,926	-		DVU2188	0.28	+1.6
2,286,947	+		DVU2188	0.29	-1.8
2,286,950	-		DVU2188	0.29	+0.6
2,286,969	-		DVU2188	0.30	-1.2
2,287,002	-		DVU2188	0.31	-1.7
2,287,089	-		DVU2188	0.34	+2.2
2,287,217	+		DVU2188	0.40	+2.0
2,287,250	-		DVU2188	0.41	-0.4
2,287,323	-		DVU2188	0.44	-0.3
2,287,337	+		DVU2188	0.44	-0.9
2,287,381	-		DVU2188	0.46	-1.3
2,287,443	-		DVU2188	0.49	+1.8
2,287,471	+		DVU2188	0.50	-0.8
2,287,480	+		DVU2188	0.50	+1.0
2,287,633	+		DVU2188	0.56	+2.5
2,287,688	+		DVU2188	0.58	-2.8
2,287,789	-		DVU2188	0.62	-1.6
2,287,838	-		DVU2188	0.64	+0.8
2,287,838	-		DVU2188	0.64	-0.8
2,287,838	-		DVU2188	0.64	+0.1
2,287,838	-		DVU2188	0.64	-1.1
2,287,936	+		DVU2188	0.68	+2.5
2,287,991	+		DVU2188	0.71	-0.5
2,288,068	+		DVU2188	0.74	-1.1
2,288,097	-		DVU2188	0.75	-2.1
2,288,137	-		DVU2188	0.76	+0.2
2,288,203	-		DVU2188	0.79	-1.5
2,288,231	+		DVU2188	0.80	-1.9
2,288,249	+		DVU2188	0.81	-1.8
2,288,268	-		DVU2188	0.82	+2.0
2,288,290	-		DVU2188	0.83	-1.8
2,288,295	-		DVU2188	0.83	-0.7
2,288,315	-		DVU2188	0.84	+0.6
2,288,467	+		DVU2188	0.90	-0.1
2,288,467	+		DVU2188	0.90	-1.4
2,288,475	-				+1.3
2,288,475	-				-1.5
2,288,475	-				+4.8
2,288,549	+				+1.7
2,288,557	-				-2.7
2,288,695	+				+2.0
2,288,739	-				-1.6
2,288,855	+		DVU2189	0.12	+2.2
2,288,856	-		DVU2189	0.12	-0.7
2,288,869	+		DVU2189	0.15	-0.7
2,288,910	-		DVU2189	0.24	+3.8
2,288,913	-		DVU2189	0.25	-2.1
2,288,997	-		DVU2189	0.44	-0.0
2,289,052	+		DVU2189	0.56	-0.7
2,289,298	+				+2.2
2,289,447	-		DVU2190	0.66	+1.6