Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2133

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,227,944	+		DVU2131	0.25	-2.6
2,227,959	+		DVU2131	0.28	+2.5
2,227,961	+		DVU2131	0.29	-0.4
2,227,969	-		DVU2131	0.30	+3.8
2,227,983	+		DVU2131	0.33	-0.8
2,227,985	+		DVU2131	0.34	-1.3
2,227,998	-		DVU2131	0.36	-0.6
2,227,998	-		DVU2131	0.36	+1.0
2,228,084	-		DVU2131	0.54	-1.3
2,228,091	-		DVU2131	0.56	-0.7
2,228,091	-		DVU2131	0.56	-0.7
2,228,213	+		DVU2131	0.81	-1.6
2,228,239	+		DVU2131	0.87	-1.9
2,228,239	+		DVU2131	0.87	-0.3
2,228,247	-		DVU2131	0.88	-1.3
2,228,247	-		DVU2131	0.88	+0.6
2,228,274	-				+1.2
2,228,382	-				+0.8
2,228,459	-				+0.5
2,228,500	+				-0.2
2,228,645	-		DVU2132	0.29	-1.9
2,228,778	+		DVU2132	0.81	+1.2
2,228,786	-		DVU2132	0.84	-1.4
2,228,792	-		DVU2132	0.86	+2.2
2,228,810	+				-1.9
2,228,823	-				-0.9
2,228,917	+				-1.2
2,228,952	+				-1.1
2,228,973	+				-1.9
2,229,037	+				+3.8
2,229,102	-		DVU2133	0.13	+2.1
2,229,112	-		DVU2133	0.13	-0.6
2,229,210	+		DVU2133	0.19	-1.1
2,229,237	+		DVU2133	0.20	-0.7
2,229,240	-		DVU2133	0.21	-1.2
2,229,245	-		DVU2133	0.21	-1.4
2,229,276	-		DVU2133	0.23	+1.0
2,229,451	-		DVU2133	0.33	-2.3
2,229,566	-		DVU2133	0.39	+1.8
2,229,732	+		DVU2133	0.49	-1.3
2,229,755	-		DVU2133	0.50	+2.8
2,229,815	+		DVU2133	0.54	-2.1
2,229,853	-		DVU2133	0.56	+1.6
2,229,873	+		DVU2133	0.57	-1.1
2,229,873	+		DVU2133	0.57	+1.2
2,229,931	+		DVU2133	0.60	+0.9
2,229,937	-		DVU2133	0.61	+2.5
2,229,994	-		DVU2133	0.64	+2.8
2,230,021	-		DVU2133	0.66	-0.5
2,230,078	-		DVU2133	0.69	-1.4
2,230,144	-		DVU2133	0.73	+0.1
2,230,204	-		DVU2133	0.76	+2.0
2,230,210	-		DVU2133	0.76	+0.6
2,230,311	-		DVU2133	0.82	-0.2
2,230,351	+		DVU2133	0.84	-0.6
2,230,403	+		DVU2133	0.87	-0.1
2,230,404	-		DVU2133	0.88	-1.8
2,230,411	-		DVU2133	0.88	+0.8
2,230,413	-		DVU2133	0.88	+0.9
2,230,450	+				-0.3
2,230,450	-				+0.3
2,230,450	-				+1.5
2,230,450	-				-0.5
2,230,567	+				-1.6
2,230,633	+				-1.5
2,231,007	+				-2.0
2,231,032	+				-0.6
2,231,032	+				+0.9
2,231,064	-				+2.5
2,231,072	-				+0.3
2,231,194	-				+0.8
2,231,243	+				-0.9
2,231,324	+				-0.4
2,231,383	-				-1.3
2,231,437	+		DVU2135	0.18	+2.6
2,231,444	+		DVU2135	0.19	-1.7
2,231,444	+		DVU2135	0.19	+0.3
2,231,452	-		DVU2135	0.20	-1.7
2,231,556	+		DVU2135	0.39	-0.9
2,231,583	-		DVU2135	0.44	+1.5
2,231,599	-		DVU2135	0.47	-1.0
2,231,605	-		DVU2135	0.48	-1.6