Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2033

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
2,113,781	+				+1.6
2,113,781	+				+0.1
2,113,789	-				+0.8
2,113,789	-				-2.9
2,113,801	+				-1.8
2,113,970	+				+1.1
2,113,980	-				+0.9
2,113,980	-				+1.0
2,113,985	+				+2.8
2,113,985	+				+0.9
2,113,993	-				-0.4
2,113,993	-				+1.6
2,114,055	-		DVU2032	0.13	-1.4
2,114,130	+		DVU2032	0.23	-1.8
2,114,150	+		DVU2032	0.26	-0.9
2,114,216	-		DVU2032	0.35	+2.2
2,114,249	-		DVU2032	0.40	+1.6
2,114,258	+		DVU2032	0.41	+2.2
2,114,261	-		DVU2032	0.42	+1.5
2,114,261	-		DVU2032	0.42	-0.4
2,114,261	-		DVU2032	0.42	-2.3
2,114,261	-		DVU2032	0.42	-1.5
2,114,261	-		DVU2032	0.42	-2.3
2,114,261	-		DVU2032	0.42	-2.5
2,114,298	-		DVU2032	0.47	-1.1
2,114,340	+		DVU2032	0.53	+0.7
2,114,403	+		DVU2032	0.62	+1.1
2,114,472	-		DVU2032	0.71	+1.2
2,114,499	-		DVU2032	0.75	-2.1
2,114,536	+		DVU2032	0.80	-1.5
2,114,539	-		DVU2032	0.81	+2.5
2,114,661	+				-2.4
2,114,669	-				-2.0
2,114,708	+				-0.1
2,114,818	-				-1.7
2,114,869	+				-2.1
2,114,877	-		DVU2033	0.10	-0.8
2,114,925	+		DVU2033	0.14	+0.6
2,114,925	+		DVU2033	0.14	-1.7
2,114,988	-		DVU2033	0.19	-2.4
2,115,048	-		DVU2033	0.24	-1.5
2,115,053	-		DVU2033	0.24	-0.1
2,115,074	-		DVU2033	0.26	-2.0
2,115,149	-		DVU2033	0.32	-1.3
2,115,184	-		DVU2033	0.34	+3.2
2,115,188	+		DVU2033	0.35	-0.0
2,115,189	-		DVU2033	0.35	+0.1
2,115,197	+		DVU2033	0.35	+1.6
2,115,197	+		DVU2033	0.35	-0.9
2,115,216	-		DVU2033	0.37	-1.3
2,115,227	+		DVU2033	0.38	-1.9
2,115,490	+		DVU2033	0.58	+3.2
2,115,541	-		DVU2033	0.62	-1.8
2,115,591	-		DVU2033	0.66	+1.0
2,115,640	-		DVU2033	0.70	+0.1
2,115,640	-		DVU2033	0.70	+2.4
2,115,669	-		DVU2033	0.72	-0.7
2,115,752	+		DVU2033	0.79	+0.7
2,115,770	-		DVU2033	0.80	-1.6
2,115,793	+		DVU2033	0.82	-1.2
2,115,820	+		DVU2033	0.84	-1.8
2,115,820	+		DVU2033	0.84	+0.2
2,115,828	-		DVU2033	0.85	-2.1
2,115,828	-		DVU2033	0.85	-0.7
2,115,868	+		DVU2033	0.88	-2.7
2,115,876	-		DVU2033	0.89	+0.2
2,116,006	+				-1.6
2,116,020	-				+1.8
2,116,043	+				-2.3
2,116,157	+		DVU2034	0.37	-1.2
2,116,328	+		DVU2034	0.84	-1.7
2,116,345	+		DVU2034	0.88	-1.8
2,116,390	+				+1.1
2,116,611	+		DVU2035	0.79	+2.0
2,116,981	+				-2.0
2,116,981	+				-1.3