Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1646

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
1,724,351	+		DVU1644	0.58	-2.6
1,724,356	+		DVU1644	0.58	+3.6
1,724,399	+		DVU1644	0.62	-2.1
1,724,399	-		DVU1644	0.62	-0.4
1,724,554	+		DVU1644	0.76	-0.4
1,724,562	-		DVU1644	0.77	-2.0
1,724,567	+		DVU1644	0.77	+1.9
1,725,027	+		DVU1645	0.57	+1.2
1,725,244	+				-1.5
1,725,365	+				+1.9
1,725,373	-				+0.7
1,725,389	+	arsC	DVU1646	0.13	-1.7
1,725,457	+	arsC	DVU1646	0.28	-1.9
1,725,459	+	arsC	DVU1646	0.29	-2.0
1,725,631	-	arsC	DVU1646	0.67	+2.3
1,725,719	+	arsC	DVU1646	0.87	-0.2
1,725,856	+				-0.5
1,725,861	-				+3.3
1,725,919	+				-1.3
1,725,951	-				+1.6
1,725,966	+				-1.3
1,725,974	-				-1.2
1,726,029	-				-0.7
1,726,243	+	lysA-1	DVU1647	0.20	+0.6
1,726,246	-	lysA-1	DVU1647	0.20	-1.2
1,726,260	-	lysA-1	DVU1647	0.21	-1.7
1,726,417	-	lysA-1	DVU1647	0.34	-0.9
1,726,459	+	lysA-1	DVU1647	0.37	+0.2
1,726,542	-	lysA-1	DVU1647	0.44	-1.5
1,726,631	-	lysA-1	DVU1647	0.51	-2.2
1,726,699	-	lysA-1	DVU1647	0.56	-2.9
1,726,705	-	lysA-1	DVU1647	0.57	-1.4
1,726,757	+	lysA-1	DVU1647	0.61	+0.8
1,726,774	+	lysA-1	DVU1647	0.62	-1.1