Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1597

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
1,679,318	+				-1.3
1,679,374	-	cheB-1	DVU1596	0.15	-0.9
1,679,405	+	cheB-1	DVU1596	0.18	-1.8
1,679,413	-	cheB-1	DVU1596	0.19	-1.4
1,679,459	+	cheB-1	DVU1596	0.23	-2.1
1,679,492	+	cheB-1	DVU1596	0.26	+2.9
1,679,493	+	cheB-1	DVU1596	0.26	-1.3
1,679,529	+	cheB-1	DVU1596	0.30	-0.5
1,679,583	-	cheB-1	DVU1596	0.35	-1.6
1,679,624	+	cheB-1	DVU1596	0.38	-1.6
1,679,634	+	cheB-1	DVU1596	0.39	-1.5
1,679,634	-	cheB-1	DVU1596	0.39	-1.7
1,679,634	-	cheB-1	DVU1596	0.39	-0.8
1,679,694	+	cheB-1	DVU1596	0.45	+1.2
1,679,825	-	cheB-1	DVU1596	0.57	-0.4
1,679,830	+	cheB-1	DVU1596	0.58	+1.2
1,679,840	-	cheB-1	DVU1596	0.58	-2.7
1,679,930	-	cheB-1	DVU1596	0.67	-0.6
1,679,953	-	cheB-1	DVU1596	0.69	-0.2
1,679,988	+	cheB-1	DVU1596	0.72	-1.3
1,680,042	-	cheB-1	DVU1596	0.77	+0.8
1,680,067	-	cheB-1	DVU1596	0.80	-2.5
1,680,087	+	cheB-1	DVU1596	0.81	+2.0
1,680,162	+	cheB-1	DVU1596	0.88	-0.5
1,680,162	+	cheB-1	DVU1596	0.88	-1.1
1,680,181	+				-1.4
1,680,361	-				-1.0
1,680,363	+				-1.4
1,680,363	+				+1.7
1,680,370	+				+3.3
1,680,422	+	sir	DVU1597	0.17	-0.2
1,680,555	-	sir	DVU1597	0.37	+2.3
1,680,589	-	sir	DVU1597	0.43	-1.6
1,680,700	+	sir	DVU1597	0.60	+0.9
1,680,825	+	sir	DVU1597	0.79	+0.3
1,680,845	-	sir	DVU1597	0.82	+1.2
1,680,870	-	sir	DVU1597	0.85	-2.1
1,680,959	-				+0.6
1,681,017	+				-1.7
1,681,023	-				-1.2
1,681,137	+				-2.3
1,681,140	-				+1.5
1,681,145	-				-1.7
1,681,252	+				-1.8
1,681,265	-				-1.5
1,681,323	+				+0.3
1,681,353	-				+0.2
1,681,366	+				-0.3
1,681,386	+				+1.9
1,681,394	-				-3.1
1,681,434	+		DVU1598	0.21	-1.3
1,681,465	+		DVU1598	0.30	-0.7
1,681,473	-		DVU1598	0.32	-1.5
1,681,495	+		DVU1598	0.39	-1.3
1,681,620	+		DVU1598	0.75	+2.9
1,681,620	+		DVU1598	0.75	-3.7
1,681,630	+		DVU1598	0.78	-0.6
1,681,675	+				+0.8
1,681,688	+				-1.3
1,681,819	+	crcB	DVU1599	0.18	+1.2
1,681,827	-	crcB	DVU1599	0.21	-1.4
1,681,866	+	crcB	DVU1599	0.31	-0.4