Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1569

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
1,649,745	+				-3.0
1,649,745	+				-1.5
1,649,747	+				-1.1
1,649,753	-				-2.6
1,649,769	-				-1.5
1,649,883	+		DVU1567	0.63	-1.3
1,649,978	-				-2.3
1,649,978	-				+2.5
1,649,994	+				+0.4
1,650,002	-				+0.1
1,650,026	-				-1.3
1,650,060	+				-2.4
1,650,060	+				-0.5
1,650,068	-				-1.2
1,650,170	-				-1.9
1,650,328	+	ftn	DVU1568	0.40	-0.9
1,650,338	-	ftn	DVU1568	0.42	-1.0
1,650,338	-	ftn	DVU1568	0.42	-1.7
1,650,383	-	ftn	DVU1568	0.51	-2.0
1,650,386	+	ftn	DVU1568	0.51	-1.4
1,650,408	+	ftn	DVU1568	0.56	-1.3
1,650,512	-	ftn	DVU1568	0.76	-0.6
1,650,512	-	ftn	DVU1568	0.76	-1.1
1,650,517	-	ftn	DVU1568	0.77	-1.5
1,650,578	-	ftn	DVU1568	0.89	-1.8
1,650,595	-				-0.9
1,650,685	+				+0.7
1,650,685	+				-2.2
1,650,788	+				-2.1
1,650,788	+				+1.5
1,650,788	+				-1.9
1,650,788	+				-0.7
1,650,796	-				+2.0
1,650,796	-				-1.2
1,650,833	-				-0.6
1,650,852	+				-0.2
1,650,858	+				+1.5
1,650,898	+	porA	DVU1569	0.11	-3.8
1,650,926	+	porA	DVU1569	0.13	+2.5
1,650,991	-	porA	DVU1569	0.16	-2.6
1,651,011	+	porA	DVU1569	0.18	+1.4
1,651,186	-	porA	DVU1569	0.28	-2.4
1,651,194	-	porA	DVU1569	0.28	+1.5
1,651,291	-	porA	DVU1569	0.34	-2.1
1,651,292	-	porA	DVU1569	0.34	+3.8
1,651,298	-	porA	DVU1569	0.34	+0.4
1,651,392	+	porA	DVU1569	0.39	+0.5
1,651,400	-	porA	DVU1569	0.40	-2.0
1,651,400	-	porA	DVU1569	0.40	-1.7
1,651,490	-	porA	DVU1569	0.45	-2.1
1,651,621	+	porA	DVU1569	0.53	-1.9
1,651,725	-	porA	DVU1569	0.59	-2.2
1,651,737	+	porA	DVU1569	0.59	-2.0
1,652,199	+	porA	DVU1569	0.86	-0.7
1,652,207	-	porA	DVU1569	0.86	-1.2
1,652,207	-	porA	DVU1569	0.86	-2.0
1,652,208	+	porA	DVU1569	0.86	+0.4
1,652,249	+	porA	DVU1569	0.89	+2.5
1,652,253	-	porA	DVU1569	0.89	-0.6
1,652,276	+				-1.8
1,652,483	-				+2.2
1,652,484	-				+2.0
1,652,665	+	porB	DVU1570	0.26	-1.0
1,652,665	+	porB	DVU1570	0.26	-1.8
1,652,671	-	porB	DVU1570	0.27	+1.4
1,652,825	+	porB	DVU1570	0.45	-2.7
1,653,107	-	porB	DVU1570	0.78	-0.3
1,653,164	-	porB	DVU1570	0.85	+0.5
1,653,208	-				-2.2
1,653,433	-				-2.6
1,653,433	-				-1.4