Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0911

Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
1,004,903	+	fliM	DVU0910	0.69	-2.2
1,004,945	-	fliM	DVU0910	0.73	-1.3
1,004,979	+	fliM	DVU0910	0.77	-0.4
1,005,058	-	fliM	DVU0910	0.85	+1.3
1,005,065	-	fliM	DVU0910	0.85	-1.6
1,005,083	-	fliM	DVU0910	0.87	+1.0
1,005,121	-				+2.4
1,005,229	-				+0.0
1,005,379	+				-0.6
1,005,482	+				+0.7
1,005,533	-				-3.1
1,005,577	-				-1.0
1,005,680	+				-1.4
1,005,723	-				-1.3
1,005,807	-				-0.6
1,005,963	-	truA	DVU0911	0.17	+3.7
1,006,088	-	truA	DVU0911	0.31	-1.5
1,006,112	-	truA	DVU0911	0.34	-0.0
1,006,112	-	truA	DVU0911	0.34	-0.3
1,006,130	-	truA	DVU0911	0.36	-0.2
1,006,263	+	truA	DVU0911	0.51	+3.1
1,006,270	+	truA	DVU0911	0.52	+4.7
1,006,271	-	truA	DVU0911	0.52	+0.6
1,006,294	+	truA	DVU0911	0.54	-0.6
1,006,307	-	truA	DVU0911	0.56	-0.3
1,006,313	+	truA	DVU0911	0.57	-0.7
1,006,346	+	truA	DVU0911	0.60	+3.1
1,006,482	-	truA	DVU0911	0.76	-1.9
1,006,617	-				-1.1
1,006,643	-				+0.2
1,006,651	-				+1.3
1,006,689	+				-1.0
1,006,693	-				-1.5
1,006,841	+		DVU0912	0.24	+1.0
1,006,841	-		DVU0912	0.24	+3.1
1,006,921	+		DVU0912	0.37	-1.9
1,006,931	+		DVU0912	0.39	+0.5
1,007,188	+		DVU0912	0.83	+2.4
1,007,222	+		DVU0912	0.89	-1.5
1,007,222	+		DVU0912	0.89	+1.0
1,007,285	+				-0.4
1,007,295	+				-0.2
1,007,303	-				+0.8
1,007,547	+		DVU0913	0.42	+2.1
1,007,555	-		DVU0913	0.44	-0.6
1,007,576	+		DVU0913	0.49	+0.3
1,007,584	-		DVU0913	0.50	+0.3
1,007,584	-		DVU0913	0.50	+0.3
1,007,690	-		DVU0913	0.75	-1.3