Experiment: MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0752 and DVU0753 are separated by 97 nucleotides DVU0753 and DVU0754 overlap by 4 nucleotides DVU0754 and DVU0755 are separated by 111 nucleotides
DVU0752: DVU0752 - amino acid ABC transporter, amino acid-binding protein (TIGR), at 844,606 to 845,433
DVU0752
DVU0753: DVU0753 - amino acid ABC transporter, ATP-binding protein (TIGR), at 845,531 to 846,262
DVU0753
DVU0754: DVU0754 - hypothetical protein (TIGR), at 846,259 to 846,393
DVU0754
DVU0755: DVU0755 - sensor histidine kinase, putative (TIGR), at 846,505 to 847,872
DVU0755
Position (kb) 846
847 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 845.350 kb on + strand, within DVU0752 at 845.358 kb on - strand at 845.397 kb on - strand at 845.411 kb on - strand at 845.421 kb on + strand at 845.455 kb on + strand at 845.542 kb on + strand at 845.609 kb on - strand, within DVU0753 at 845.619 kb on + strand, within DVU0753 at 845.632 kb on - strand, within DVU0753 at 845.698 kb on - strand, within DVU0753 at 845.768 kb on + strand, within DVU0753 at 845.805 kb on - strand, within DVU0753 at 845.805 kb on - strand, within DVU0753 at 845.852 kb on - strand, within DVU0753 at 845.902 kb on + strand, within DVU0753 at 845.942 kb on - strand, within DVU0753 at 845.949 kb on + strand, within DVU0753 at 845.969 kb on - strand, within DVU0753 at 845.980 kb on - strand, within DVU0753 at 845.992 kb on + strand, within DVU0753 at 845.998 kb on + strand, within DVU0753 at 846.006 kb on - strand, within DVU0753 at 846.030 kb on + strand, within DVU0753 at 846.030 kb on + strand, within DVU0753 at 846.033 kb on - strand, within DVU0753 at 846.038 kb on - strand, within DVU0753 at 846.060 kb on + strand, within DVU0753 at 846.177 kb on - strand, within DVU0753 at 846.187 kb on - strand, within DVU0753 at 846.276 kb on - strand, within DVU0754 at 846.488 kb on + strand at 846.511 kb on - strand at 846.627 kb on - strand at 846.632 kb on - strand at 846.780 kb on - strand, within DVU0755 at 846.782 kb on - strand, within DVU0755 at 846.860 kb on + strand, within DVU0755 at 846.935 kb on - strand, within DVU0755 at 847.211 kb on + strand, within DVU0755 at 847.359 kb on + strand, within DVU0755
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without B12 vitamin with Casaminos (vit. assay) 0.05% remove 845,350 + DVU0752 0.90 -1.3 845,358 - +0.7 845,397 - +1.2 845,411 - +0.1 845,421 + -1.0 845,455 + -1.3 845,542 + -2.1 845,609 - DVU0753 0.11 -1.0 845,619 + DVU0753 0.12 -0.4 845,632 - DVU0753 0.14 -0.1 845,698 - DVU0753 0.23 -2.7 845,768 + DVU0753 0.32 -1.0 845,805 - DVU0753 0.37 -3.4 845,805 - DVU0753 0.37 +1.6 845,852 - DVU0753 0.44 -1.8 845,902 + DVU0753 0.51 -0.3 845,942 - DVU0753 0.56 -1.5 845,949 + DVU0753 0.57 +0.5 845,969 - DVU0753 0.60 -0.3 845,980 - DVU0753 0.61 -0.4 845,992 + DVU0753 0.63 -0.8 845,998 + DVU0753 0.64 +1.9 846,006 - DVU0753 0.65 -1.0 846,030 + DVU0753 0.68 +1.4 846,030 + DVU0753 0.68 -0.5 846,033 - DVU0753 0.69 +1.8 846,038 - DVU0753 0.69 -1.2 846,060 + DVU0753 0.72 +0.8 846,177 - DVU0753 0.88 -2.2 846,187 - DVU0753 0.90 +4.7 846,276 - DVU0754 0.13 -0.8 846,488 + -2.8 846,511 - +2.7 846,627 - +2.4 846,632 - -1.2 846,780 - DVU0755 0.20 +0.8 846,782 - DVU0755 0.20 +0.2 846,860 + DVU0755 0.26 +0.5 846,935 - DVU0755 0.31 -1.1 847,211 + DVU0755 0.52 +2.2 847,359 + DVU0755 0.62 -1.6
Or see this region's nucleotide sequence