Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2554

Experiment: MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%
2,665,125	-				-0.8
2,665,187	+				-0.5
2,665,248	-				-0.3
2,665,266	+	nifU-3	DVU2553	0.17	+3.0
2,665,272	-	nifU-3	DVU2553	0.20	+0.3
2,665,288	-	nifU-3	DVU2553	0.26	-1.5
2,665,321	+	nifU-3	DVU2553	0.39	+2.3
2,665,369	+	nifU-3	DVU2553	0.59	+0.6
2,665,495	-				-0.6
2,665,497	+				+1.8
2,665,536	+				-0.1
2,665,543	-				-0.2
2,665,567	-				-1.3
2,665,567	-				-1.3
2,665,618	+				+0.3
2,665,626	-				+0.2
2,665,629	+				-0.2
2,665,631	+				-0.6
2,665,637	-				-2.1
2,665,696	+		DVU2554	0.14	-1.4
2,665,704	-		DVU2554	0.15	-0.7
2,665,815	-		DVU2554	0.27	+1.3
2,665,826	+		DVU2554	0.29	-1.8
2,665,986	-		DVU2554	0.47	-0.9
2,666,019	-		DVU2554	0.51	-0.7
2,666,065	+		DVU2554	0.56	-0.5
2,666,073	-		DVU2554	0.57	+1.3
2,666,073	-		DVU2554	0.57	+0.3
2,666,280	+		DVU2554	0.80	+0.2
2,666,285	+		DVU2554	0.81	-0.5
2,666,290	+		DVU2554	0.81	-0.8
2,666,351	+		DVU2554	0.88	+1.0
2,666,399	+				+0.6
2,666,433	-				+0.2
2,666,542	-				+0.8
2,666,552	+				-0.4
2,666,574	+				-0.4
2,666,606	-		DVU2555	0.11	-0.4
2,666,607	+		DVU2555	0.12	+0.7
2,666,650	+		DVU2555	0.15	-0.3
2,666,685	-		DVU2555	0.17	-0.6
2,666,837	-		DVU2555	0.28	+0.7
2,666,847	-		DVU2555	0.28	-0.0
2,666,856	+		DVU2555	0.29	-0.1
2,666,900	-		DVU2555	0.32	-0.7
2,666,914	+		DVU2555	0.33	+0.2
2,666,919	+		DVU2555	0.33	+0.1
2,666,919	+		DVU2555	0.33	-0.4
2,667,038	-		DVU2555	0.42	-0.8
2,667,079	-		DVU2555	0.45	-0.5
2,667,096	-		DVU2555	0.46	-0.2
2,667,353	+		DVU2555	0.64	-1.8