Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2403

Experiment: MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%
2,507,764	+	hdrA	DVU2402	0.71	-1.2
2,507,870	+	hdrA	DVU2402	0.76	-1.2
2,507,878	-	hdrA	DVU2402	0.76	+1.3
2,507,878	-	hdrA	DVU2402	0.76	+0.3
2,507,878	-	hdrA	DVU2402	0.76	+0.6
2,507,931	-	hdrA	DVU2402	0.79	-0.5
2,507,951	-	hdrA	DVU2402	0.80	-0.5
2,508,072	-	hdrA	DVU2402	0.86	-2.3
2,508,085	+	hdrA	DVU2402	0.87	-0.7
2,508,098	-	hdrA	DVU2402	0.88	-1.0
2,508,124	-	hdrA	DVU2402	0.89	-0.4
2,508,244	+				+0.4
2,508,358	-				+0.8
2,508,374	+				+0.9
2,508,377	-				-0.7
2,508,466	+	hdrB	DVU2403	0.13	-0.5
2,508,466	+	hdrB	DVU2403	0.13	-0.9
2,508,474	-	hdrB	DVU2403	0.14	+0.0
2,508,511	-	hdrB	DVU2403	0.17	-0.6
2,508,530	+	hdrB	DVU2403	0.19	-1.1
2,508,540	+	hdrB	DVU2403	0.20	-0.8
2,508,540	+	hdrB	DVU2403	0.20	+0.3
2,508,548	-	hdrB	DVU2403	0.21	-0.5
2,508,548	-	hdrB	DVU2403	0.21	-0.7
2,508,786	-	hdrB	DVU2403	0.45	+1.9
2,508,938	-	hdrB	DVU2403	0.60	-0.0
2,508,954	-	hdrB	DVU2403	0.61	-1.6
2,509,065	-	hdrB	DVU2403	0.72	-0.7
2,509,090	-	hdrB	DVU2403	0.75	-0.8
2,509,125	-	hdrB	DVU2403	0.78	-0.2
2,509,184	+	hdrB	DVU2403	0.84	-0.9
2,509,192	-	hdrB	DVU2403	0.85	-0.9
2,509,247	-				-0.8
2,509,251	+				-0.8
2,509,252	+				+0.5
2,509,301	+				+0.3
2,509,308	+				-0.2
2,509,677	-	hdrC	DVU2404	0.60	-1.1
2,509,682	-	hdrC	DVU2404	0.61	-1.0
2,509,876	+				+0.5
2,509,884	-				+0.2
2,509,932	+				+0.3
2,509,940	-				-0.2
2,509,940	-				-0.7
2,509,986	+				-0.3
2,510,072	-				-1.5
2,510,075	+				+0.6
2,510,075	+				-0.3
2,510,083	-				+0.0
2,510,124	+				-0.3
2,510,196	-				-0.1
2,510,238	+				+0.7
2,510,259	+		DVU2405	0.11	-0.2