Experiment: MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0740 and DVU0741 are separated by 56 nucleotides DVU0741 and DVU0742 are separated by 7 nucleotides DVU0742 and DVU0743 are separated by 4 nucleotides
DVU0740: DVU0740 - membrane protein, putative (TIGR), at 827,914 to 829,089
DVU0740
DVU0741: DVU0741 - hypothetical protein (TIGR), at 829,146 to 829,622
DVU0741
DVU0742: DVU0742 - hypothetical protein (TIGR), at 829,630 to 830,466
DVU0742
DVU0743: DVU0743 - sensory box histidine kinase (TIGR), at 830,471 to 832,468
DVU0743
Position (kb) 829
830 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 828.202 kb on + strand, within DVU0740 at 828.332 kb on - strand, within DVU0740 at 828.413 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.500 kb on - strand, within DVU0740 at 828.505 kb on - strand, within DVU0740 at 828.513 kb on + strand, within DVU0740 at 828.515 kb on - strand, within DVU0740 at 828.691 kb on - strand, within DVU0740 at 828.704 kb on - strand, within DVU0740 at 828.796 kb on - strand, within DVU0740 at 828.933 kb on + strand, within DVU0740 at 828.945 kb on + strand, within DVU0740 at 828.969 kb on + strand, within DVU0740 at 829.059 kb on + strand at 829.073 kb on - strand at 829.150 kb on - strand at 829.154 kb on + strand at 829.164 kb on + strand at 829.170 kb on - strand at 829.172 kb on - strand at 829.177 kb on + strand at 829.243 kb on - strand, within DVU0741 at 829.286 kb on + strand, within DVU0741 at 829.289 kb on - strand, within DVU0741 at 829.368 kb on - strand, within DVU0741 at 829.389 kb on - strand, within DVU0741 at 829.422 kb on + strand, within DVU0741 at 829.512 kb on - strand, within DVU0741 at 829.527 kb on + strand, within DVU0741 at 829.636 kb on - strand at 829.710 kb on + strand at 829.737 kb on + strand, within DVU0742 at 829.747 kb on + strand, within DVU0742 at 829.755 kb on - strand, within DVU0742 at 829.755 kb on - strand, within DVU0742 at 829.819 kb on + strand, within DVU0742 at 829.897 kb on - strand, within DVU0742 at 829.907 kb on - strand, within DVU0742 at 829.911 kb on + strand, within DVU0742 at 829.951 kb on + strand, within DVU0742 at 829.992 kb on + strand, within DVU0742 at 830.000 kb on - strand, within DVU0742 at 830.000 kb on - strand, within DVU0742 at 830.001 kb on - strand, within DVU0742 at 830.040 kb on - strand, within DVU0742 at 830.086 kb on + strand, within DVU0742 at 830.149 kb on - strand, within DVU0742 at 830.226 kb on + strand, within DVU0742 at 830.252 kb on - strand, within DVU0742 at 830.252 kb on - strand, within DVU0742 at 830.290 kb on + strand, within DVU0742 at 830.298 kb on - strand, within DVU0742 at 830.300 kb on + strand, within DVU0742 at 830.344 kb on - strand, within DVU0742 at 830.363 kb on + strand, within DVU0742 at 830.405 kb on - strand at 830.565 kb on + strand at 830.572 kb on - strand at 830.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05% remove 828,202 + DVU0740 0.24 -1.8 828,332 - DVU0740 0.36 -0.3 828,413 + DVU0740 0.42 -0.2 828,423 + DVU0740 0.43 +2.3 828,423 + DVU0740 0.43 -0.1 828,423 + DVU0740 0.43 +0.3 828,423 + DVU0740 0.43 -1.7 828,500 - DVU0740 0.50 -1.1 828,505 - DVU0740 0.50 -0.5 828,513 + DVU0740 0.51 +1.3 828,515 - DVU0740 0.51 -0.3 828,691 - DVU0740 0.66 -1.4 828,704 - DVU0740 0.67 -0.8 828,796 - DVU0740 0.75 -1.5 828,933 + DVU0740 0.87 +0.7 828,945 + DVU0740 0.88 -0.1 828,969 + DVU0740 0.90 -1.4 829,059 + -0.1 829,073 - -0.2 829,150 - -0.2 829,154 + -0.5 829,164 + -1.1 829,170 - -0.9 829,172 - -0.0 829,177 + -0.5 829,243 - DVU0741 0.20 -0.8 829,286 + DVU0741 0.29 -0.1 829,289 - DVU0741 0.30 -1.4 829,368 - DVU0741 0.47 -0.9 829,389 - DVU0741 0.51 -0.2 829,422 + DVU0741 0.58 -2.9 829,512 - DVU0741 0.77 -1.8 829,527 + DVU0741 0.80 -0.7 829,636 - -1.3 829,710 + +0.2 829,737 + DVU0742 0.13 -0.2 829,747 + DVU0742 0.14 +0.4 829,755 - DVU0742 0.15 -0.5 829,755 - DVU0742 0.15 -0.5 829,819 + DVU0742 0.23 -1.0 829,897 - DVU0742 0.32 -1.0 829,907 - DVU0742 0.33 -0.6 829,911 + DVU0742 0.34 -0.2 829,951 + DVU0742 0.38 -0.5 829,992 + DVU0742 0.43 -0.2 830,000 - DVU0742 0.44 +0.4 830,000 - DVU0742 0.44 -1.2 830,001 - DVU0742 0.44 +0.0 830,040 - DVU0742 0.49 -1.1 830,086 + DVU0742 0.54 -0.4 830,149 - DVU0742 0.62 -1.0 830,226 + DVU0742 0.71 -0.8 830,252 - DVU0742 0.74 -0.8 830,252 - DVU0742 0.74 -0.5 830,290 + DVU0742 0.79 -1.3 830,298 - DVU0742 0.80 -1.0 830,300 + DVU0742 0.80 +0.6 830,344 - DVU0742 0.85 +0.3 830,363 + DVU0742 0.88 -1.6 830,405 - -1.3 830,565 + -0.3 830,572 - -0.0 830,591 - -0.1
Or see this region's nucleotide sequence