Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF807
Experiment: MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 134,812 | + | DVUA0099 | 0.57 | +0.7 | |
| 134,820 | - | DVUA0099 | 0.57 | -0.3 | |
| 134,873 | - | DVUA0099 | 0.60 | +0.1 | |
| 134,873 | - | DVUA0099 | 0.60 | +0.7 | |
| 135,024 | - | DVUA0099 | 0.67 | -0.5 | |
| 135,051 | + | DVUA0099 | 0.68 | +1.7 | |
| 135,229 | + | DVUA0099 | 0.76 | -1.6 | |
| 135,341 | + | DVUA0099 | 0.81 | -0.6 | |
| 135,344 | - | DVUA0099 | 0.81 | +0.8 | |
| 135,351 | + | DVUA0099 | 0.82 | +1.0 | |
| 135,356 | + | DVUA0099 | 0.82 | +1.0 | |
| 135,500 | - | DVUA0099 | 0.88 | -0.4 | |
| 135,561 | + | -0.1 | |||
| 135,569 | - | +0.5 | |||
| 135,635 | + | -0.4 | |||
| 135,643 | - | +1.0 | |||
| 135,734 | + | +0.1 | |||
| 135,762 | - | -0.1 | |||
| 135,849 | - | DORF807 | 0.29 | -1.0 | |
| 135,924 | + | DORF807 | 0.49 | -0.9 | |
| 135,932 | - | DORF807 | 0.51 | -0.9 | |
| 135,998 | - | DORF807 | 0.69 | -1.6 | |
| 136,048 | - | DORF807 | 0.82 | +0.1 | |
| 136,064 | - | DORF807 | 0.86 | -0.9 | |
| 136,066 | + | DORF807 | 0.87 | -0.0 | |
| 136,092 | - | +0.5 | |||
| 136,092 | - | -0.3 | |||
| 136,110 | + | +0.9 | |||
| 136,368 | + | flrC | DVUA0100 | 0.15 | -0.2 |
| 136,416 | + | flrC | DVUA0100 | 0.18 | +1.0 |
| 136,437 | + | flrC | DVUA0100 | 0.19 | -0.2 |
| 136,478 | - | flrC | DVUA0100 | 0.21 | +0.1 |
| 136,540 | - | flrC | DVUA0100 | 0.25 | -0.0 |
| 136,557 | + | flrC | DVUA0100 | 0.26 | -0.3 |
| 136,633 | + | flrC | DVUA0100 | 0.30 | -0.1 |
| 136,638 | - | flrC | DVUA0100 | 0.30 | +0.3 |
| 136,638 | - | flrC | DVUA0100 | 0.30 | +0.0 |
| 136,652 | - | flrC | DVUA0100 | 0.31 | -0.8 |
| 136,674 | + | flrC | DVUA0100 | 0.33 | -0.1 |
| 136,868 | + | flrC | DVUA0100 | 0.44 | -0.3 |
| 136,912 | + | flrC | DVUA0100 | 0.46 | +0.6 |
| 136,958 | - | flrC | DVUA0100 | 0.49 | -0.0 |
| 137,015 | - | flrC | DVUA0100 | 0.52 | +0.0 |
Or see this region's nucleotide sequence